RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 MRS2Q9HD23 443 aa19.54■□□□□ 0.72
SCARB2-208ENST00000638372 STAG3Q9UJ98 1225 aa19.53■□□□□ 0.72
SCARB2-208ENST00000638372 ESF1Q9H501 851 aaKnown RBP19.52■□□□□ 0.71
SCARB2-208ENST00000638372 PLPPR3Q6T4P5 718 aa19.51■□□□□ 0.71
SCARB2-208ENST00000638372 ZBTB47Q9UFB7 747 aaPredicted RBP19.51■□□□□ 0.71
SCARB2-208ENST00000638372 PLEKHD1A6NEE1 506 aa19.5■□□□□ 0.71
SCARB2-208ENST00000638372 EIF4G2P78344 907 aaKnown RBP eCLIP19.5■□□□□ 0.71
SCARB2-208ENST00000638372 SIN3AQ96ST3 1273 aa19.48■□□□□ 0.71
SCARB2-208ENST00000638372 NPM2Q86SE8 214 aaKnown RBP19.47■□□□□ 0.71
SCARB2-208ENST00000638372 CCDC88BA6NC98 1476 aa19.47■□□□□ 0.71
SCARB2-208ENST00000638372 ABCC8Q09428 1581 aa19.45■□□□□ 0.7
SCARB2-208ENST00000638372 RGL3Q3MIN7 710 aa19.44■□□□□ 0.7
SCARB2-208ENST00000638372 IRX6P78412 446 aaPredicted RBP19.44■□□□□ 0.7
SCARB2-208ENST00000638372 CFDP1Q9UEE9 299 aaPredicted RBP19.44■□□□□ 0.7
SCARB2-208ENST00000638372 SENP3Q9H4L4 574 aaPredicted RBP19.43■□□□□ 0.7
SCARB2-208ENST00000638372 SENP3-EIF4A1A0A087X0R7 540 aa19.4■□□□□ 0.7
SCARB2-208ENST00000638372 ANP32AP39687 249 aaKnown RBP19.4■□□□□ 0.7
SCARB2-208ENST00000638372 CARMIL1Q5VZK9 1371 aa19.4■□□□□ 0.7
SCARB2-208ENST00000638372 CUX2O14529 1486 aa19.4■□□□□ 0.7
SCARB2-208ENST00000638372 KANK4Q5T7N3 995 aaPredicted RBP19.35■□□□□ 0.69
SCARB2-208ENST00000638372 CCDC136Q96JN2 1154 aa19.35■□□□□ 0.69
SCARB2-208ENST00000638372 CCNB3Q8WWL7 1395 aa19.34■□□□□ 0.69
SCARB2-208ENST00000638372 WDR43Q15061 677 aaKnown RBP eCLIP19.31■□□□□ 0.68
SCARB2-208ENST00000638372 WIZO95785 1651 aa19.27■□□□□ 0.67
SCARB2-208ENST00000638372 VPS8Q8N3P4 1428 aa19.27■□□□□ 0.67
SCARB2-208ENST00000638372 FHAD1B1AJZ9 1412 aa19.25■□□□□ 0.67
SCARB2-208ENST00000638372 CARD11Q9BXL7 1154 aa19.22■□□□□ 0.67
SCARB2-208ENST00000638372 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
SCARB2-208ENST00000638372 TDRD9Q8NDG6 1382 aaKnown RBP19.2■□□□□ 0.66
SCARB2-208ENST00000638372 EIF4G1Q04637 1599 aaKnown RBP19.17■□□□□ 0.66
SCARB2-208ENST00000638372 SUPT16HQ9Y5B9 1047 aaKnown RBP19.15■□□□□ 0.66
SCARB2-208ENST00000638372 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.14■□□□□ 0.66
SCARB2-208ENST00000638372 SMARCA2P51531 1590 aa19.14■□□□□ 0.65
SCARB2-208ENST00000638372 TOP2AP11388 1531 aaKnown RBP19.12■□□□□ 0.65
SCARB2-208ENST00000638372 FOXD1Q16676 465 aa19.11■□□□□ 0.65
SCARB2-208ENST00000638372 PPP1R15AO75807 674 aaPredicted RBP19.08■□□□□ 0.64
SCARB2-208ENST00000638372 SETD5Q9C0A6 1442 aa19.08■□□□□ 0.64
SCARB2-208ENST00000638372 UPF2Q9HAU5 1272 aaKnown RBP19.08■□□□□ 0.64
SCARB2-208ENST00000638372 KNSTRNQ9Y448 316 aa19.07■□□□□ 0.64
SCARB2-208ENST00000638372 RUSC2Q8N2Y8 1516 aa19.07■□□□□ 0.64
SCARB2-208ENST00000638372 DCAF11Q8TEB1 546 aa19.07■□□□□ 0.64
SCARB2-208ENST00000638372 HSP90AA1P07900 732 aaKnown RBP19.06■□□□□ 0.64
SCARB2-208ENST00000638372 PLEKHG5O94827 1062 aa19.06■□□□□ 0.64
SCARB2-208ENST00000638372 NBR1Q14596 966 aa19.05■□□□□ 0.64
SCARB2-208ENST00000638372 RAPGEF2Q9Y4G8 1499 aa19.04■□□□□ 0.64
SCARB2-208ENST00000638372 RAB3GAP2Q9H2M9 1393 aa19.03■□□□□ 0.64
SCARB2-208ENST00000638372 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
SCARB2-208ENST00000638372 ARHGAP35Q9NRY4 1499 aa19.02■□□□□ 0.64
SCARB2-208ENST00000638372 CADPSQ9ULU8 1353 aa19.02■□□□□ 0.63
SCARB2-208ENST00000638372 TIMELESSQ9UNS1 1208 aa19.01■□□□□ 0.63
SCARB2-208ENST00000638372 NEUROD2Q15784 382 aa19■□□□□ 0.63
SCARB2-208ENST00000638372 CDCA8Q53HL2 280 aa19■□□□□ 0.63
SCARB2-208ENST00000638372 PDS5BQ9NTI5 1447 aa19■□□□□ 0.63
SCARB2-208ENST00000638372 PKD2Q13563 968 aa18.98■□□□□ 0.63
SCARB2-208ENST00000638372 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
SCARB2-208ENST00000638372 CC2D1BQ5T0F9 858 aaKnown RBP18.98■□□□□ 0.63
SCARB2-208ENST00000638372 HSPA5P11021 654 aaKnown RBP18.97■□□□□ 0.63
SCARB2-208ENST00000638372 TNNT2P45379 298 aaPredicted RBP18.97■□□□□ 0.63
SCARB2-208ENST00000638372 FHOD3Q2V2M9 1422 aa18.96■□□□□ 0.63
SCARB2-208ENST00000638372 ARID4BQ4LE39 1312 aaPredicted RBP18.95■□□□□ 0.62
SCARB2-208ENST00000638372 C14orf37Q86TY3 774 aa18.94■□□□□ 0.62
SCARB2-208ENST00000638372 FMN1Q68DA7 1419 aa18.93■□□□□ 0.62
SCARB2-208ENST00000638372 SMARCA4P51532 1647 aa18.93■□□□□ 0.62
SCARB2-208ENST00000638372 MPHOSPH9Q99550 1183 aa18.92■□□□□ 0.62
SCARB2-208ENST00000638372 ZBTB7CA1YPR0 619 aa18.92■□□□□ 0.62
SCARB2-208ENST00000638372 CFAP53Q96M91 514 aa18.91■□□□□ 0.62
SCARB2-208ENST00000638372 POGKQ9P215 609 aa18.87■□□□□ 0.61
SCARB2-208ENST00000638372 ARXQ96QS3 562 aa18.86■□□□□ 0.61
SCARB2-208ENST00000638372 B4GALNT3Q6L9W6 998 aa18.86■□□□□ 0.61
SCARB2-208ENST00000638372 TMF1P82094 1093 aa18.85■□□□□ 0.61
SCARB2-208ENST00000638372 GGT6Q6P531 493 aa18.85■□□□□ 0.61
SCARB2-208ENST00000638372 CARMIL2Q6F5E8 1435 aa18.85■□□□□ 0.61
SCARB2-208ENST00000638372 NUP155O75694 1391 aa18.84■□□□□ 0.61
SCARB2-208ENST00000638372 PPP4R2Q9NY27 417 aa18.83■□□□□ 0.6
SCARB2-208ENST00000638372 CCER2I3L3R5 266 aa18.83■□□□□ 0.6
SCARB2-208ENST00000638372 L3MBTL2Q969R5 705 aa18.83■□□□□ 0.6
SCARB2-208ENST00000638372 SAFB2Q14151 953 aaKnown RBP eCLIP18.82■□□□□ 0.6
SCARB2-208ENST00000638372 MYH16Q9H6N6 1097 aa18.82■□□□□ 0.6
SCARB2-208ENST00000638372 MLECQ14165 292 aa18.81■□□□□ 0.6
SCARB2-208ENST00000638372 FRAT1Q92837 279 aaPredicted RBP18.8■□□□□ 0.6
SCARB2-208ENST00000638372 HNRNPMP52272 730 aaKnown RBP eCLIP18.79■□□□□ 0.6
SCARB2-208ENST00000638372 LAS1LQ9Y4W2 734 aaKnown RBP18.79■□□□□ 0.6
SCARB2-208ENST00000638372 U2SURPO15042 1029 aaKnown RBP18.78■□□□□ 0.6
SCARB2-208ENST00000638372 JPH4Q96JJ6 628 aa18.78■□□□□ 0.6
SCARB2-208ENST00000638372 RGS3P49796 1198 aa18.77■□□□□ 0.59
SCARB2-208ENST00000638372 MAPK8IP3Q9UPT6 1336 aa18.76■□□□□ 0.59
SCARB2-208ENST00000638372 A0A0G2JS52 829 aa18.76■□□□□ 0.59
SCARB2-208ENST00000638372 EFCAB2Q5VUJ9 269 aa18.75■□□□□ 0.59
SCARB2-208ENST00000638372 NUDCQ9Y266 331 aa18.75■□□□□ 0.59
SCARB2-208ENST00000638372 FTSJ3Q8IY81 847 aaKnown RBP18.75■□□□□ 0.59
SCARB2-208ENST00000638372 ANP32BQ92688 251 aaKnown RBP18.75■□□□□ 0.59
SCARB2-208ENST00000638372 KANK1Q14678 1352 aa18.75■□□□□ 0.59
SCARB2-208ENST00000638372 DHX57Q6P158 1386 aaKnown RBP18.75■□□□□ 0.59
SCARB2-208ENST00000638372 ANKRD30AQ9BXX3 1397 aa18.74■□□□□ 0.59
SCARB2-208ENST00000638372 FANCD2Q9BXW9 1451 aa18.73■□□□□ 0.59
SCARB2-208ENST00000638372 SRPK2P78362 688 aaKnown RBP18.71■□□□□ 0.59
SCARB2-208ENST00000638372 STK26Q9P289 416 aa18.71■□□□□ 0.59
SCARB2-208ENST00000638372 IGF1RP08069 1367 aa18.7■□□□□ 0.58
SCARB2-208ENST00000638372 EIF5BO60841 1220 aaKnown RBP18.7■□□□□ 0.58
SCARB2-208ENST00000638372 LMOD2Q6P5Q4 547 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms