RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 FTSJ3Q8IY81 847 aaKnown RBP23.41■■□□□ 1.34
CACNA1A-247ENST00000637769 CFAP53Q96M91 514 aa23.41■■□□□ 1.34
CACNA1A-247ENST00000637769 SALL2Q9Y467 1007 aaPredicted RBP23.4■■□□□ 1.34
CACNA1A-247ENST00000637769 CFAP44Q96MT7 982 aa23.4■■□□□ 1.34
CACNA1A-247ENST00000637769 SCAF1Q9H7N4 1312 aaKnown RBP23.37■■□□□ 1.33
CACNA1A-247ENST00000637769 NAP1L5Q96NT1 182 aaPredicted RBP23.37■■□□□ 1.33
CACNA1A-247ENST00000637769 TSPY4P0CV99 314 aa23.36■■□□□ 1.33
CACNA1A-247ENST00000637769 TSPY10P0CW01 314 aa23.36■■□□□ 1.33
CACNA1A-247ENST00000637769 MS4A1P11836 297 aa23.36■■□□□ 1.33
CACNA1A-247ENST00000637769 P3H3Q8IVL6 736 aa23.33■■□□□ 1.33
CACNA1A-247ENST00000637769 EIF4G2P78344 907 aaKnown RBP eCLIP23.31■■□□□ 1.32
CACNA1A-247ENST00000637769 A0A0G2JS52 829 aa23.29■■□□□ 1.32
CACNA1A-247ENST00000637769 USP35Q9P2H5 1018 aa23.28■■□□□ 1.32
CACNA1A-247ENST00000637769 PTMSP20962 102 aa23.27■■□□□ 1.32
CACNA1A-247ENST00000637769 ABCC9O60706 1549 aa23.27■■□□□ 1.32
CACNA1A-247ENST00000637769 KIAA2012Q0VF49 1180 aa23.27■■□□□ 1.32
CACNA1A-247ENST00000637769 MSNP26038 577 aaKnown RBP23.27■■□□□ 1.32
CACNA1A-247ENST00000637769 ARID3CA6NKF2 412 aa23.27■■□□□ 1.32
CACNA1A-247ENST00000637769 PNNQ9H307 717 aaKnown RBP23.26■■□□□ 1.31
CACNA1A-247ENST00000637769 FGD1P98174 961 aa23.25■■□□□ 1.31
CACNA1A-247ENST00000637769 MTUS2Q5JR59 1369 aa23.24■■□□□ 1.31
CACNA1A-247ENST00000637769 GOLGA6L4A6NEF3 574 aa23.24■■□□□ 1.31
CACNA1A-247ENST00000637769 CCDC180Q9P1Z9 1646 aa23.23■■□□□ 1.31
CACNA1A-247ENST00000637769 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.21■■□□□ 1.31
CACNA1A-247ENST00000637769 KNSTRNQ9Y448 316 aa23.2■■□□□ 1.3
CACNA1A-247ENST00000637769 HSP90AB1P08238 724 aaKnown RBP23.2■■□□□ 1.3
CACNA1A-247ENST00000637769 RSF1Q96T23 1441 aaPredicted RBP23.19■■□□□ 1.3
CACNA1A-247ENST00000637769 PPP1R15AO75807 674 aaPredicted RBP23.18■■□□□ 1.3
CACNA1A-247ENST00000637769 MCCP23508 829 aa23.18■■□□□ 1.3
CACNA1A-247ENST00000637769 PABPN1Q86U42 306 aaKnown RBP eCLIP23.18■■□□□ 1.3
CACNA1A-247ENST00000637769 GOLGA2Q08379 1002 aa23.17■■□□□ 1.3
CACNA1A-247ENST00000637769 C14orf37Q86TY3 774 aa23.15■■□□□ 1.3
CACNA1A-247ENST00000637769 KCNJ4P48050 445 aa23.15■■□□□ 1.3
CACNA1A-247ENST00000637769 PLCB2Q00722 1185 aa23.13■■□□□ 1.29
CACNA1A-247ENST00000637769 MAPK8IP3Q9UPT6 1336 aa23.13■■□□□ 1.29
CACNA1A-247ENST00000637769 TULP1O00294 542 aaPredicted RBP23.12■■□□□ 1.29
CACNA1A-247ENST00000637769 HAP1P54257 671 aaPredicted RBP23.12■■□□□ 1.29
CACNA1A-247ENST00000637769 NUDCQ9Y266 331 aa23.12■■□□□ 1.29
CACNA1A-247ENST00000637769 KDM2AQ9Y2K7 1162 aa23.12■■□□□ 1.29
CACNA1A-247ENST00000637769 NPHP1O15259 732 aa23.11■■□□□ 1.29
CACNA1A-247ENST00000637769 HSCBQ8IWL3 235 aa23.11■■□□□ 1.29
CACNA1A-247ENST00000637769 SCRIBQ14160 1630 aa23.11■■□□□ 1.29
CACNA1A-247ENST00000637769 NOC3LQ8WTT2 800 aaKnown RBP23.09■■□□□ 1.29
CACNA1A-247ENST00000637769 PLPPR3Q6T4P5 718 aa23.08■■□□□ 1.29
CACNA1A-247ENST00000637769 DRC7Q8IY82 874 aa23.08■■□□□ 1.29
CACNA1A-247ENST00000637769 NOP58Q9Y2X3 529 aaKnown RBP23.07■■□□□ 1.28
CACNA1A-247ENST00000637769 CCDC34Q96HJ3 373 aa23.07■■□□□ 1.28
CACNA1A-247ENST00000637769 OS9Q13438 667 aaPredicted RBP23.06■■□□□ 1.28
CACNA1A-247ENST00000637769 HTATSF1O43719 755 aaKnown RBP23.03■■□□□ 1.28
CACNA1A-247ENST00000637769 GOLGA6L1Q8N7Z2 621 aa23.02■■□□□ 1.28
CACNA1A-247ENST00000637769 SYAP1Q96A49 352 aaPredicted RBP23.02■■□□□ 1.27
CACNA1A-247ENST00000637769 GNL2Q13823 731 aaKnown RBP22.99■■□□□ 1.27
CACNA1A-247ENST00000637769 CLSTN1O94985 981 aa22.98■■□□□ 1.27
CACNA1A-247ENST00000637769 ZBTB7CA1YPR0 619 aa22.98■■□□□ 1.27
CACNA1A-247ENST00000637769 PPP4R2Q9NY27 417 aa22.97■■□□□ 1.27
CACNA1A-247ENST00000637769 CHIC2Q9UKJ5 165 aa22.96■■□□□ 1.27
CACNA1A-247ENST00000637769 TNNT3P45378 269 aaPredicted RBP22.96■■□□□ 1.27
CACNA1A-247ENST00000637769 IRX6P78412 446 aaPredicted RBP22.95■■□□□ 1.27
CACNA1A-247ENST00000637769 TPM4P67936 248 aa22.95■■□□□ 1.26
CACNA1A-247ENST00000637769 NAP1L2Q9ULW6 460 aaPredicted RBP22.94■■□□□ 1.26
CACNA1A-247ENST00000637769 GBP4Q96PP9 640 aa22.93■■□□□ 1.26
CACNA1A-247ENST00000637769 CHMP4AQ9BY43 222 aa22.91■■□□□ 1.26
CACNA1A-247ENST00000637769 TPRNQ4KMQ1 711 aa22.91■■□□□ 1.26
CACNA1A-247ENST00000637769 EEA1Q15075 1411 aa22.91■■□□□ 1.26
CACNA1A-247ENST00000637769 CLIP1P30622 1438 aa22.9■■□□□ 1.26
CACNA1A-247ENST00000637769 ARID4BQ4LE39 1312 aaPredicted RBP22.89■■□□□ 1.25
CACNA1A-247ENST00000637769 KIAA1211Q6ZU35 1233 aa22.88■■□□□ 1.25
CACNA1A-247ENST00000637769 CSPP1Q1MSJ5 1256 aa22.86■■□□□ 1.25
CACNA1A-247ENST00000637769 MIER1Q8N108 512 aa22.84■■□□□ 1.25
CACNA1A-247ENST00000637769 SETQ01105 290 aaPredicted RBP22.84■■□□□ 1.25
CACNA1A-247ENST00000637769 A0A0U1RQG5 324 aaPredicted RBP22.83■■□□□ 1.25
CACNA1A-247ENST00000637769 PHF14O94880 888 aa22.83■■□□□ 1.25
CACNA1A-247ENST00000637769 LAS1LQ9Y4W2 734 aaKnown RBP22.82■■□□□ 1.24
CACNA1A-247ENST00000637769 CHMP7Q8WUX9 453 aaPredicted RBP22.81■■□□□ 1.24
CACNA1A-247ENST00000637769 RGS3P49796 1198 aa22.81■■□□□ 1.24
CACNA1A-247ENST00000637769 SUPT16HQ9Y5B9 1047 aaKnown RBP22.8■■□□□ 1.24
CACNA1A-247ENST00000637769 CALD1Q05682 793 aaKnown RBP22.79■■□□□ 1.24
CACNA1A-247ENST00000637769 GOLGA3Q08378 1498 aa22.79■■□□□ 1.24
CACNA1A-247ENST00000637769 IPO8O15397 1037 aaKnown RBP22.77■■□□□ 1.24
CACNA1A-247ENST00000637769 FRAT1Q92837 279 aaPredicted RBP22.76■■□□□ 1.23
CACNA1A-247ENST00000637769 CARD11Q9BXL7 1154 aa22.76■■□□□ 1.23
CACNA1A-247ENST00000637769 HDAC5Q9UQL6 1122 aa22.76■■□□□ 1.23
CACNA1A-247ENST00000637769 PLEKHD1A6NEE1 506 aa22.75■■□□□ 1.23
CACNA1A-247ENST00000637769 HDGFP51858 240 aaKnown RBP22.74■■□□□ 1.23
CACNA1A-247ENST00000637769 POGKQ9P215 609 aa22.74■■□□□ 1.23
CACNA1A-247ENST00000637769 GPATCH3Q96I76 525 aa22.74■■□□□ 1.23
CACNA1A-247ENST00000637769 NCBP3Q53F19 620 aaKnown RBP22.74■■□□□ 1.23
CACNA1A-247ENST00000637769 KANK1Q14678 1352 aa22.72■■□□□ 1.23
CACNA1A-247ENST00000637769 ZCCHC6Q5VYS8 1495 aaKnown RBP22.72■■□□□ 1.23
CACNA1A-247ENST00000637769 CEP89Q96ST8 783 aa22.71■■□□□ 1.23
CACNA1A-247ENST00000637769 TAOK2Q9UL54 1235 aa22.69■■□□□ 1.22
CACNA1A-247ENST00000637769 TMX4Q9H1E5 349 aaPredicted RBP22.69■■□□□ 1.22
CACNA1A-247ENST00000637769 PRM3Q9NNZ6 103 aa22.69■■□□□ 1.22
CACNA1A-247ENST00000637769 RTN4Q9NQC3 1192 aaKnown RBP22.69■■□□□ 1.22
CACNA1A-247ENST00000637769 KIF3AQ9Y496 699 aa22.68■■□□□ 1.22
CACNA1A-247ENST00000637769 AMER1Q5JTC6 1135 aaPredicted RBP22.66■■□□□ 1.22
CACNA1A-247ENST00000637769 CHMP4CQ96CF2 233 aa22.66■■□□□ 1.22
CACNA1A-247ENST00000637769 ISY1Q9ULR0 285 aaKnown RBP22.65■■□□□ 1.22
CACNA1A-247ENST00000637769 RTF1Q92541 710 aaKnown RBP22.64■■□□□ 1.22
CACNA1A-247ENST00000637769 RRP7BPQ9NSQ0 103 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms