RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 ANP32EQ9BTT0 268 aa25.08■■□□□ 1.6
CACNA1A-246ENST00000637736 TAOK2Q9UL54 1235 aa25.08■■□□□ 1.6
CACNA1A-246ENST00000637736 HAP1P54257 671 aaPredicted RBP25.07■■□□□ 1.6
CACNA1A-246ENST00000637736 NPHP1O15259 732 aa25.04■■□□□ 1.6
CACNA1A-246ENST00000637736 CSRNP3Q8WYN3 585 aa25.03■■□□□ 1.6
CACNA1A-246ENST00000637736 SCRIBQ14160 1630 aa25.03■■□□□ 1.6
CACNA1A-246ENST00000637736 SENP3Q9H4L4 574 aaPredicted RBP25■■□□□ 1.59
CACNA1A-246ENST00000637736 CASC1Q6TDU7 716 aa24.99■■□□□ 1.59
CACNA1A-246ENST00000637736 DDRGK1Q96HY6 314 aa24.99■■□□□ 1.59
CACNA1A-246ENST00000637736 CLSTN1O94985 981 aa24.97■■□□□ 1.59
CACNA1A-246ENST00000637736 DDX10Q13206 875 aaKnown RBP24.96■■□□□ 1.59
CACNA1A-246ENST00000637736 KDM2AQ9Y2K7 1162 aa24.93■■□□□ 1.58
CACNA1A-246ENST00000637736 TSPY4P0CV99 314 aa24.93■■□□□ 1.58
CACNA1A-246ENST00000637736 TSPY10P0CW01 314 aa24.93■■□□□ 1.58
CACNA1A-246ENST00000637736 PLCB2Q00722 1185 aa24.9■■□□□ 1.58
CACNA1A-246ENST00000637736 GOLGA6L6A8MZA4 724 aa24.89■■□□□ 1.57
CACNA1A-246ENST00000637736 MRS2Q9HD23 443 aa24.87■■□□□ 1.57
CACNA1A-246ENST00000637736 PPP1R15AO75807 674 aaPredicted RBP24.85■■□□□ 1.57
CACNA1A-246ENST00000637736 IRX6P78412 446 aaPredicted RBP24.85■■□□□ 1.57
CACNA1A-246ENST00000637736 NAP1L5Q96NT1 182 aaPredicted RBP24.8■■□□□ 1.56
CACNA1A-246ENST00000637736 MTUS2Q5JR59 1369 aa24.79■■□□□ 1.56
CACNA1A-246ENST00000637736 NAP1L2Q9ULW6 460 aaPredicted RBP24.79■■□□□ 1.56
CACNA1A-246ENST00000637736 GOLGA2Q08379 1002 aa24.79■■□□□ 1.56
CACNA1A-246ENST00000637736 FGD1P98174 961 aa24.77■■□□□ 1.56
CACNA1A-246ENST00000637736 CHIC2Q9UKJ5 165 aa24.77■■□□□ 1.56
CACNA1A-246ENST00000637736 AMER1Q5JTC6 1135 aaPredicted RBP24.76■■□□□ 1.55
CACNA1A-246ENST00000637736 PRM3Q9NNZ6 103 aa24.76■■□□□ 1.55
CACNA1A-246ENST00000637736 CFAP53Q96M91 514 aa24.75■■□□□ 1.55
CACNA1A-246ENST00000637736 FTSJ3Q8IY81 847 aaKnown RBP24.74■■□□□ 1.55
CACNA1A-246ENST00000637736 NRDCO43847 1150 aa24.73■■□□□ 1.55
CACNA1A-246ENST00000637736 PPM1GO15355 546 aaPredicted RBP24.72■■□□□ 1.55
CACNA1A-246ENST00000637736 CDCA8Q53HL2 280 aa24.69■■□□□ 1.54
CACNA1A-246ENST00000637736 LAS1LQ9Y4W2 734 aaKnown RBP24.69■■□□□ 1.54
CACNA1A-246ENST00000637736 EIF4G2P78344 907 aaKnown RBP eCLIP24.67■■□□□ 1.54
CACNA1A-246ENST00000637736 DCAF1Q9Y4B6 1507 aa24.66■■□□□ 1.54
CACNA1A-246ENST00000637736 OS9Q13438 667 aaPredicted RBP24.66■■□□□ 1.54
CACNA1A-246ENST00000637736 KCNJ4P48050 445 aa24.65■■□□□ 1.54
CACNA1A-246ENST00000637736 CHMP7Q8WUX9 453 aaPredicted RBP24.65■■□□□ 1.54
CACNA1A-246ENST00000637736 ISY1Q9ULR0 285 aaKnown RBP24.64■■□□□ 1.54
CACNA1A-246ENST00000637736 CHAF1AQ13111 956 aaPredicted RBP24.62■■□□□ 1.53
CACNA1A-246ENST00000637736 ERICH6BQ5W0A0 696 aa24.62■■□□□ 1.53
CACNA1A-246ENST00000637736 LMOD2Q6P5Q4 547 aa24.61■■□□□ 1.53
CACNA1A-246ENST00000637736 CHMP4BQ9H444 224 aaKnown RBP24.61■■□□□ 1.53
CACNA1A-246ENST00000637736 RSF1Q96T23 1441 aaPredicted RBP24.6■■□□□ 1.53
CACNA1A-246ENST00000637736 HSP90AB1P08238 724 aaKnown RBP24.59■■□□□ 1.53
CACNA1A-246ENST00000637736 KNSTRNQ9Y448 316 aa24.58■■□□□ 1.53
CACNA1A-246ENST00000637736 L1TD1Q5T7N2 865 aaKnown RBP24.58■■□□□ 1.53
CACNA1A-246ENST00000637736 ARID4BQ4LE39 1312 aaPredicted RBP24.57■■□□□ 1.52
CACNA1A-246ENST00000637736 NOC3LQ8WTT2 800 aaKnown RBP24.57■■□□□ 1.52
CACNA1A-246ENST00000637736 KIAA2012Q0VF49 1180 aa24.56■■□□□ 1.52
CACNA1A-246ENST00000637736 GOLGA6L4A6NEF3 574 aa24.56■■□□□ 1.52
CACNA1A-246ENST00000637736 DRC7Q8IY82 874 aa24.56■■□□□ 1.52
CACNA1A-246ENST00000637736 CCDC180Q9P1Z9 1646 aa24.56■■□□□ 1.52
CACNA1A-246ENST00000637736 PNNQ9H307 717 aaKnown RBP24.52■■□□□ 1.52
CACNA1A-246ENST00000637736 RTN4Q9NQC3 1192 aaKnown RBP24.52■■□□□ 1.52
CACNA1A-246ENST00000637736 MAPK8IP3Q9UPT6 1336 aa24.52■■□□□ 1.52
CACNA1A-246ENST00000637736 HIRIP3Q9BW71 556 aaPredicted RBP24.46■■□□□ 1.51
CACNA1A-246ENST00000637736 GNL2Q13823 731 aaKnown RBP24.45■■□□□ 1.5
CACNA1A-246ENST00000637736 NUDCQ9Y266 331 aa24.45■■□□□ 1.5
CACNA1A-246ENST00000637736 MS4A1P11836 297 aa24.45■■□□□ 1.5
CACNA1A-246ENST00000637736 SENP3-EIF4A1A0A087X0R7 540 aa24.43■■□□□ 1.5
CACNA1A-246ENST00000637736 NEUROD2Q15784 382 aa24.43■■□□□ 1.5
CACNA1A-246ENST00000637736 MSNP26038 577 aaKnown RBP24.42■■□□□ 1.5
CACNA1A-246ENST00000637736 PLEKHD1A6NEE1 506 aa24.38■■□□□ 1.49
CACNA1A-246ENST00000637736 KCNH8Q96L42 1107 aa24.38■■□□□ 1.49
CACNA1A-246ENST00000637736 RRP7BPQ9NSQ0 103 aa24.37■■□□□ 1.49
CACNA1A-246ENST00000637736 CLIP1P30622 1438 aa24.37■■□□□ 1.49
CACNA1A-246ENST00000637736 RGL3Q3MIN7 710 aa24.35■■□□□ 1.49
CACNA1A-246ENST00000637736 FRAT1Q92837 279 aaPredicted RBP24.35■■□□□ 1.49
CACNA1A-246ENST00000637736 PDE4CQ08493 712 aa24.35■■□□□ 1.49
CACNA1A-246ENST00000637736 A0A0U1RQG5 324 aaPredicted RBP24.34■■□□□ 1.49
CACNA1A-246ENST00000637736 RGS3P49796 1198 aa24.34■■□□□ 1.49
CACNA1A-246ENST00000637736 POGKQ9P215 609 aa24.33■■□□□ 1.49
CACNA1A-246ENST00000637736 CFAP44Q96MT7 982 aa24.32■■□□□ 1.48
CACNA1A-246ENST00000637736 MCCP23508 829 aa24.32■■□□□ 1.48
CACNA1A-246ENST00000637736 ZCCHC6Q5VYS8 1495 aaKnown RBP24.31■■□□□ 1.48
CACNA1A-246ENST00000637736 RB1CC1Q8TDY2 1594 aa24.28■■□□□ 1.48
CACNA1A-246ENST00000637736 HSCBQ8IWL3 235 aa24.27■■□□□ 1.48
CACNA1A-246ENST00000637736 CARD11Q9BXL7 1154 aa24.26■■□□□ 1.47
CACNA1A-246ENST00000637736 GOLGA3Q08378 1498 aa24.24■■□□□ 1.47
CACNA1A-246ENST00000637736 MIER1Q8N108 512 aa24.23■■□□□ 1.47
CACNA1A-246ENST00000637736 KRI1Q8N9T8 703 aaKnown RBP24.22■■□□□ 1.47
CACNA1A-246ENST00000637736 TNNT3P45378 269 aaPredicted RBP24.21■■□□□ 1.47
CACNA1A-246ENST00000637736 TMX4Q9H1E5 349 aaPredicted RBP24.21■■□□□ 1.47
CACNA1A-246ENST00000637736 U2SURPO15042 1029 aaKnown RBP24.21■■□□□ 1.47
CACNA1A-246ENST00000637736 SPRYD3Q8NCJ5 442 aa24.21■■□□□ 1.47
CACNA1A-246ENST00000637736 CFDP1Q9UEE9 299 aaPredicted RBP24.19■■□□□ 1.46
CACNA1A-246ENST00000637736 KANK1Q14678 1352 aa24.19■■□□□ 1.46
CACNA1A-246ENST00000637736 HDGFP51858 240 aaKnown RBP24.19■■□□□ 1.46
CACNA1A-246ENST00000637736 SUPT16HQ9Y5B9 1047 aaKnown RBP24.18■■□□□ 1.46
CACNA1A-246ENST00000637736 ARID3AQ99856 593 aa24.17■■□□□ 1.46
CACNA1A-246ENST00000637736 GOLGA6L1Q8N7Z2 621 aa24.16■■□□□ 1.46
CACNA1A-246ENST00000637736 EEA1Q15075 1411 aa24.16■■□□□ 1.46
CACNA1A-246ENST00000637736 ANO8Q9HCE9 1232 aaPredicted RBP24.14■■□□□ 1.46
CACNA1A-246ENST00000637736 SOX12O15370 315 aa24.14■■□□□ 1.45
CACNA1A-246ENST00000637736 KIAA1211Q6ZU35 1233 aa24.13■■□□□ 1.45
CACNA1A-246ENST00000637736 NOP58Q9Y2X3 529 aaKnown RBP24.12■■□□□ 1.45
CACNA1A-246ENST00000637736 ERCC6Q03468 1493 aa24.11■■□□□ 1.45
CACNA1A-246ENST00000637736 PTMSP20962 102 aa24.1■■□□□ 1.45
CACNA1A-246ENST00000637736 CEP89Q96ST8 783 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms