RNA–Protein interactions for RNA: ENST00000637358.1

PCCA-214, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-214ENST00000637358 CCDC61Q9Y6R9 512 aa13.65□□□□□ -0.22
PCCA-214ENST00000637358 RASEFQ8IZ41 740 aa13.63□□□□□ -0.23
PCCA-214ENST00000637358 MS4A3Q96HJ5 214 aa13.59□□□□□ -0.23
PCCA-214ENST00000637358 KIF12Q96FN5 646 aa13.57□□□□□ -0.24
PCCA-214ENST00000637358 NUBP1P53384 320 aa13.56□□□□□ -0.24
PCCA-214ENST00000637358 ASTLQ6HA08 431 aaPredicted RBP13.49□□□□□ -0.25
PCCA-214ENST00000637358 MAP3K13O43283 966 aa13.49□□□□□ -0.25
PCCA-214ENST00000637358 FAM212AQ96EL1 285 aa13.48□□□□□ -0.25
PCCA-214ENST00000637358 VASPP50552 380 aaPredicted RBP13.47□□□□□ -0.25
PCCA-214ENST00000637358 ATMINO43313 823 aaPredicted RBP13.46□□□□□ -0.25
PCCA-214ENST00000637358 PELP1Q8IZL8 1130 aaKnown RBP13.45□□□□□ -0.26
PCCA-214ENST00000637358 SGIP1Q9BQI5 828 aa13.44□□□□□ -0.26
PCCA-214ENST00000637358 KLHL34Q8N239 644 aa13.4□□□□□ -0.26
PCCA-214ENST00000637358 SLC39A7Q92504 469 aa13.39□□□□□ -0.27
PCCA-214ENST00000637358 TIE1P35590 1138 aa13.39□□□□□ -0.27
PCCA-214ENST00000637358 DCAF8Q5TAQ9 597 aa13.39□□□□□ -0.27
PCCA-214ENST00000637358 C7P10643 843 aa13.38□□□□□ -0.27
PCCA-214ENST00000637358 PCDHB13Q9Y5F0 798 aa13.38□□□□□ -0.27
PCCA-214ENST00000637358 ATN1P54259 1190 aaPredicted RBP13.37□□□□□ -0.27
PCCA-214ENST00000637358 TRPC6Q9Y210 931 aa13.37□□□□□ -0.27
PCCA-214ENST00000637358 BMP2KQ9NSY1 1161 aaPredicted RBP13.36□□□□□ -0.27
PCCA-214ENST00000637358 METRNQ9UJH8 293 aa13.35□□□□□ -0.27
PCCA-214ENST00000637358 POTEB2H3BUK9 544 aa13.33□□□□□ -0.28
PCCA-214ENST00000637358 IFNL1Q8IU54 200 aa13.29□□□□□ -0.28
PCCA-214ENST00000637358 TTLL13PA6NNM8 815 aa13.29□□□□□ -0.28
PCCA-214ENST00000637358 GSE1Q14687 1217 aa13.28□□□□□ -0.28
PCCA-214ENST00000637358 PYGBP11216 843 aa13.26□□□□□ -0.29
PCCA-214ENST00000637358 OTUD5Q96G74 571 aa13.25□□□□□ -0.29
PCCA-214ENST00000637358 IFNLR1Q8IU57 520 aaPredicted RBP13.24□□□□□ -0.29
PCCA-214ENST00000637358 SPOCK2Q92563 424 aa13.2□□□□□ -0.3
PCCA-214ENST00000637358 TRIM35Q9UPQ4 493 aa13.2□□□□□ -0.3
PCCA-214ENST00000637358 TMEM106CQ9BVX2 250 aa13.18□□□□□ -0.3
PCCA-214ENST00000637358 IER5LQ5T953 404 aa13.18□□□□□ -0.3
PCCA-214ENST00000637358 POTEFA5A3E0 1075 aa13.17□□□□□ -0.3
PCCA-214ENST00000637358 CHRM1P11229 460 aaPredicted RBP13.17□□□□□ -0.3
PCCA-214ENST00000637358 MAMSTRQ6ZN01 415 aa13.17□□□□□ -0.3
PCCA-214ENST00000637358 SEC24BO95487 1268 aa13.15□□□□□ -0.3
PCCA-214ENST00000637358 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
PCCA-214ENST00000637358 PCDHB8Q9UN66 801 aa13.14□□□□□ -0.31
PCCA-214ENST00000637358 ZNF467Q7Z7K2 595 aaPredicted RBP13.13□□□□□ -0.31
PCCA-214ENST00000637358 COLQQ9Y215 455 aaPredicted RBP13.11□□□□□ -0.31
PCCA-214ENST00000637358 CIZ1Q9ULV3 898 aaPredicted RBP13.09□□□□□ -0.31
PCCA-214ENST00000637358 SCUBE2Q9NQ36 999 aa13.08□□□□□ -0.31
PCCA-214ENST00000637358 PLCG2P16885 1265 aa13.01□□□□□ -0.33
PCCA-214ENST00000637358 IRX5P78411 483 aaPredicted RBP13.01□□□□□ -0.33
PCCA-214ENST00000637358 OCEL1Q9H607 264 aa12.98□□□□□ -0.33
PCCA-214ENST00000637358 PSEN1P49768 467 aa12.98□□□□□ -0.33
PCCA-214ENST00000637358 TRIM41Q8WV44 630 aa12.97□□□□□ -0.33
PCCA-214ENST00000637358 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
PCCA-214ENST00000637358 PDAP1Q13442 181 aaKnown RBP12.95□□□□□ -0.34
PCCA-214ENST00000637358 MKRN3Q13064 507 aaKnown RBP12.92□□□□□ -0.34
PCCA-214ENST00000637358 PDCD7Q8N8D1 485 aaKnown RBP12.83□□□□□ -0.35
PCCA-214ENST00000637358 SLAIN1Q8ND83 568 aa12.83□□□□□ -0.36
PCCA-214ENST00000637358 FAM163AQ96GL9 167 aaPredicted RBP12.83□□□□□ -0.36
PCCA-214ENST00000637358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.365e-7■□□□□ 10.6
PCCA-214ENST00000637358 POTEMA6NI47 508 aa12.82□□□□□ -0.36
PCCA-214ENST00000637358 CABP2Q9NPB3 220 aa12.81□□□□□ -0.36
PCCA-214ENST00000637358 POTEGQ6S5H5 508 aa12.8□□□□□ -0.36
PCCA-214ENST00000637358 L3MBTL3Q96JM7 780 aaPredicted RBP12.79□□□□□ -0.36
PCCA-214ENST00000637358 ILDR1Q86SU0 546 aaPredicted RBP12.78□□□□□ -0.36
PCCA-214ENST00000637358 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.78□□□□□ -0.36
PCCA-214ENST00000637358 LCE2DQ5TA82 110 aaPredicted RBP12.76□□□□□ -0.37
PCCA-214ENST00000637358 RIOK3O14730 519 aaKnown RBP12.75□□□□□ -0.37
PCCA-214ENST00000637358 RNF25Q96BH1 459 aaPredicted RBP12.72□□□□□ -0.37
PCCA-214ENST00000637358 C3orf67Q6ZVT6 689 aa12.7□□□□□ -0.38
PCCA-214ENST00000637358 VGFO15240 615 aaPredicted RBP12.69□□□□□ -0.38
PCCA-214ENST00000637358 PCDH10Q9P2E7 1040 aa12.68□□□□□ -0.38
PCCA-214ENST00000637358 EFCAB3Q8N7B9 438 aa12.67□□□□□ -0.38
PCCA-214ENST00000637358 DPY19L2Q6NUT2 758 aa12.67□□□□□ -0.38
PCCA-214ENST00000637358 SNPHO15079 494 aa12.66□□□□□ -0.38
PCCA-214ENST00000637358 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.65□□□□□ -0.38
PCCA-214ENST00000637358 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
PCCA-214ENST00000637358 TAOK2Q9UL54 1235 aa12.65□□□□□ -0.38
PCCA-214ENST00000637358 G3V3G9 751 aa12.64□□□□□ -0.39
PCCA-214ENST00000637358 ST18O60284 1047 aa12.62□□□□□ -0.39
PCCA-214ENST00000637358 SOX12O15370 315 aa12.62□□□□□ -0.39
PCCA-214ENST00000637358 BOLA1Q9Y3E2 137 aa12.62□□□□□ -0.39
PCCA-214ENST00000637358 ECM2O94769 699 aaPredicted RBP12.59□□□□□ -0.39
PCCA-214ENST00000637358 PLSCR2Q9NRY7 297 aa12.58□□□□□ -0.4
PCCA-214ENST00000637358 PKD2Q13563 968 aa12.56□□□□□ -0.4
PCCA-214ENST00000637358 TMEM121BQ9BXQ6 578 aaPredicted RBP12.56□□□□□ -0.4
PCCA-214ENST00000637358 BCL11BQ9C0K0 894 aaPredicted RBP12.52□□□□□ -0.4
PCCA-214ENST00000637358 PHF8Q9UPP1 1060 aa12.5□□□□□ -0.41
PCCA-214ENST00000637358 STK24Q9Y6E0 443 aa12.5□□□□□ -0.41
PCCA-214ENST00000637358 MS4A4AQ96JQ5 239 aa12.48□□□□□ -0.41
PCCA-214ENST00000637358 STK25O00506 426 aa12.47□□□□□ -0.41
PCCA-214ENST00000637358 NLRP6P59044 892 aa12.47□□□□□ -0.41
PCCA-214ENST00000637358 RGL2O15211 777 aa12.47□□□□□ -0.41
PCCA-214ENST00000637358 CDAN1Q8IWY9 1227 aa12.47□□□□□ -0.41
PCCA-214ENST00000637358 MICALL2Q8IY33 904 aa12.47□□□□□ -0.41
PCCA-214ENST00000637358 FBXO22Q8NEZ5 403 aa12.42□□□□□ -0.42
PCCA-214ENST00000637358 MARVELD3Q96A59 401 aa12.42□□□□□ -0.42
PCCA-214ENST00000637358 MFRPQ9BY79 579 aa12.39□□□□□ -0.43
PCCA-214ENST00000637358 HOXB3P14651 431 aaPredicted RBP12.38□□□□□ -0.43
PCCA-214ENST00000637358 DOK7Q18PE1 504 aa12.37□□□□□ -0.43
PCCA-214ENST00000637358 EMP3P54852 163 aa12.36□□□□□ -0.43
PCCA-214ENST00000637358 TMEM92Q6UXU6 159 aa12.36□□□□□ -0.43
PCCA-214ENST00000637358 ZNF710Q8N1W2 664 aa12.34□□□□□ -0.43
PCCA-214ENST00000637358 RIMBP2O15034 1052 aa12.31□□□□□ -0.44
PCCA-214ENST00000637358 HOXB1P14653 301 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms