RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 PPP1R15AO75807 674 aaPredicted RBP21.22■□□□□ 0.99
CACNA1A-221ENST00000636012 ACIN1Q9UKV3 1341 aaKnown RBP21.21■□□□□ 0.99
CACNA1A-221ENST00000636012 ARID4BQ4LE39 1312 aaPredicted RBP21.18■□□□□ 0.98
CACNA1A-221ENST00000636012 PRM3Q9NNZ6 103 aa21.17■□□□□ 0.98
CACNA1A-221ENST00000636012 CLSTN1O94985 981 aa21.17■□□□□ 0.98
CACNA1A-221ENST00000636012 TSPY4P0CV99 314 aa21.16■□□□□ 0.98
CACNA1A-221ENST00000636012 TSPY10P0CW01 314 aa21.16■□□□□ 0.98
CACNA1A-221ENST00000636012 IRX6P78412 446 aaPredicted RBP21.14■□□□□ 0.98
CACNA1A-221ENST00000636012 NPHP1O15259 732 aa21.13■□□□□ 0.97
CACNA1A-221ENST00000636012 KCNH8Q96L42 1107 aa21.13■□□□□ 0.97
CACNA1A-221ENST00000636012 CHMP7Q8WUX9 453 aaPredicted RBP21.12■□□□□ 0.97
CACNA1A-221ENST00000636012 HIRIP3Q9BW71 556 aaPredicted RBP21.11■□□□□ 0.97
CACNA1A-221ENST00000636012 PPM1GO15355 546 aaPredicted RBP21.11■□□□□ 0.97
CACNA1A-221ENST00000636012 DNTTIP2Q5QJE6 756 aaKnown RBP21.1■□□□□ 0.97
CACNA1A-221ENST00000636012 MRS2Q9HD23 443 aa21.09■□□□□ 0.97
CACNA1A-221ENST00000636012 NCLP19338 710 aaKnown RBP21.07■□□□□ 0.96
CACNA1A-221ENST00000636012 TNNT2P45379 298 aaPredicted RBP21.06■□□□□ 0.96
CACNA1A-221ENST00000636012 LMOD2Q6P5Q4 547 aa21.04■□□□□ 0.96
CACNA1A-221ENST00000636012 SENP3-EIF4A1A0A087X0R7 540 aa21.02■□□□□ 0.96
CACNA1A-221ENST00000636012 LAS1LQ9Y4W2 734 aaKnown RBP21.01■□□□□ 0.95
CACNA1A-221ENST00000636012 ZRSR1Q15695 479 aaKnown RBP21■□□□□ 0.95
CACNA1A-221ENST00000636012 TRIM44Q96DX7 344 aaPredicted RBP21■□□□□ 0.95
CACNA1A-221ENST00000636012 RGL3Q3MIN7 710 aa20.99■□□□□ 0.95
CACNA1A-221ENST00000636012 MTUS2Q5JR59 1369 aa20.99■□□□□ 0.95
CACNA1A-221ENST00000636012 ANO8Q9HCE9 1232 aaPredicted RBP20.97■□□□□ 0.95
CACNA1A-221ENST00000636012 FBXO3Q9UK99 471 aa20.96■□□□□ 0.95
CACNA1A-221ENST00000636012 RRP7BPQ9NSQ0 103 aa20.96■□□□□ 0.95
CACNA1A-221ENST00000636012 PTMAP06454 111 aaKnown RBP20.96■□□□□ 0.95
CACNA1A-221ENST00000636012 PLCB2Q00722 1185 aa20.94■□□□□ 0.94
CACNA1A-221ENST00000636012 BECN1Q14457 450 aa20.93■□□□□ 0.94
CACNA1A-221ENST00000636012 CASC1Q6TDU7 716 aa20.92■□□□□ 0.94
CACNA1A-221ENST00000636012 FTSJ3Q8IY81 847 aaKnown RBP20.9■□□□□ 0.94
CACNA1A-221ENST00000636012 PDE4CQ08493 712 aa20.89■□□□□ 0.93
CACNA1A-221ENST00000636012 RTN4Q9NQC3 1192 aaKnown RBP20.89■□□□□ 0.93
CACNA1A-221ENST00000636012 GOLGA6L22H0YM25 854 aa20.87■□□□□ 0.93
CACNA1A-221ENST00000636012 CFAP53Q96M91 514 aa20.85■□□□□ 0.93
CACNA1A-221ENST00000636012 EIF4G2P78344 907 aaKnown RBP eCLIP20.84■□□□□ 0.93
CACNA1A-221ENST00000636012 NEUROD2Q15784 382 aa20.84■□□□□ 0.93
CACNA1A-221ENST00000636012 GOLGA2Q08379 1002 aa20.84■□□□□ 0.93
CACNA1A-221ENST00000636012 NAP1L2Q9ULW6 460 aaPredicted RBP20.84■□□□□ 0.93
CACNA1A-221ENST00000636012 DDRGK1Q96HY6 314 aa20.81■□□□□ 0.92
CACNA1A-221ENST00000636012 OS9Q13438 667 aaPredicted RBP20.79■□□□□ 0.92
CACNA1A-221ENST00000636012 KNSTRNQ9Y448 316 aa20.79■□□□□ 0.92
CACNA1A-221ENST00000636012 NAP1L5Q96NT1 182 aaPredicted RBP20.78■□□□□ 0.92
CACNA1A-221ENST00000636012 ERICH6BQ5W0A0 696 aa20.77■□□□□ 0.92
CACNA1A-221ENST00000636012 POGKQ9P215 609 aa20.77■□□□□ 0.92
CACNA1A-221ENST00000636012 FGD1P98174 961 aa20.77■□□□□ 0.91
CACNA1A-221ENST00000636012 TRHP20396 242 aaPredicted RBP20.75■□□□□ 0.91
CACNA1A-221ENST00000636012 PLEKHD1A6NEE1 506 aa20.75■□□□□ 0.91
CACNA1A-221ENST00000636012 ARID3AQ99856 593 aa20.75■□□□□ 0.91
CACNA1A-221ENST00000636012 ISY1Q9ULR0 285 aaKnown RBP20.75■□□□□ 0.91
CACNA1A-221ENST00000636012 MAPK8IP3Q9UPT6 1336 aa20.73■□□□□ 0.91
CACNA1A-221ENST00000636012 SOX12O15370 315 aa20.72■□□□□ 0.91
CACNA1A-221ENST00000636012 KCNJ4P48050 445 aa20.71■□□□□ 0.91
CACNA1A-221ENST00000636012 MIER1Q8N108 512 aa20.68■□□□□ 0.9
CACNA1A-221ENST00000636012 FRAT1Q92837 279 aaPredicted RBP20.67■□□□□ 0.9
CACNA1A-221ENST00000636012 U2SURPO15042 1029 aaKnown RBP20.66■□□□□ 0.9
CACNA1A-221ENST00000636012 CDCA8Q53HL2 280 aa20.66■□□□□ 0.9
CACNA1A-221ENST00000636012 ANP32EQ9BTT0 268 aa20.66■□□□□ 0.9
CACNA1A-221ENST00000636012 MLECQ14165 292 aa20.63■□□□□ 0.89
CACNA1A-221ENST00000636012 CARD11Q9BXL7 1154 aa20.63■□□□□ 0.89
CACNA1A-221ENST00000636012 CC2D1BQ5T0F9 858 aaKnown RBP20.63■□□□□ 0.89
CACNA1A-221ENST00000636012 NUDCQ9Y266 331 aa20.62■□□□□ 0.89
CACNA1A-221ENST00000636012 HSP90AB1P08238 724 aaKnown RBP20.62■□□□□ 0.89
CACNA1A-221ENST00000636012 ZCCHC6Q5VYS8 1495 aaKnown RBP20.61■□□□□ 0.89
CACNA1A-221ENST00000636012 KRI1Q8N9T8 703 aaKnown RBP20.6■□□□□ 0.89
CACNA1A-221ENST00000636012 NOC3LQ8WTT2 800 aaKnown RBP20.6■□□□□ 0.89
CACNA1A-221ENST00000636012 CFDP1Q9UEE9 299 aaPredicted RBP20.6■□□□□ 0.89
CACNA1A-221ENST00000636012 RSF1Q96T23 1441 aaPredicted RBP20.59■□□□□ 0.89
CACNA1A-221ENST00000636012 RGS3P49796 1198 aa20.59■□□□□ 0.89
CACNA1A-221ENST00000636012 ERCC6Q03468 1493 aa20.57■□□□□ 0.88
CACNA1A-221ENST00000636012 GOLGA6L6A8MZA4 724 aa20.57■□□□□ 0.88
CACNA1A-221ENST00000636012 SUPT16HQ9Y5B9 1047 aaKnown RBP20.57■□□□□ 0.88
CACNA1A-221ENST00000636012 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.56■□□□□ 0.88
CACNA1A-221ENST00000636012 CLIP1P30622 1438 aa20.54■□□□□ 0.88
CACNA1A-221ENST00000636012 SAFB2Q14151 953 aaKnown RBP eCLIP20.51■□□□□ 0.87
CACNA1A-221ENST00000636012 PNNQ9H307 717 aaKnown RBP20.5■□□□□ 0.87
CACNA1A-221ENST00000636012 GOLGA6L4A6NEF3 574 aa20.49■□□□□ 0.87
CACNA1A-221ENST00000636012 SRPK2P78362 688 aaKnown RBP20.48■□□□□ 0.87
CACNA1A-221ENST00000636012 DRC7Q8IY82 874 aa20.48■□□□□ 0.87
CACNA1A-221ENST00000636012 PAK3O75914 559 aaPredicted RBP20.47■□□□□ 0.87
CACNA1A-221ENST00000636012 ZNF330Q9Y3S2 320 aaPredicted RBP20.47■□□□□ 0.87
CACNA1A-221ENST00000636012 GNL2Q13823 731 aaKnown RBP20.46■□□□□ 0.87
CACNA1A-221ENST00000636012 WWC1Q8IX03 1113 aa20.46■□□□□ 0.87
CACNA1A-221ENST00000636012 DCAF1Q9Y4B6 1507 aa20.46■□□□□ 0.87
CACNA1A-221ENST00000636012 SPRYD3Q8NCJ5 442 aa20.45■□□□□ 0.86
CACNA1A-221ENST00000636012 A0A0U1RQG5 324 aaPredicted RBP20.43■□□□□ 0.86
CACNA1A-221ENST00000636012 RTF1Q92541 710 aaKnown RBP20.42■□□□□ 0.86
CACNA1A-221ENST00000636012 CHMP4BQ9H444 224 aaKnown RBP20.42■□□□□ 0.86
CACNA1A-221ENST00000636012 NRDCO43847 1150 aa20.42■□□□□ 0.86
CACNA1A-221ENST00000636012 STK26Q9P289 416 aa20.42■□□□□ 0.86
CACNA1A-221ENST00000636012 EIF4G1Q04637 1599 aaKnown RBP20.41■□□□□ 0.86
CACNA1A-221ENST00000636012 APBB1O00213 710 aa20.4■□□□□ 0.86
CACNA1A-221ENST00000636012 CCDC9Q9Y3X0 531 aaKnown RBP20.39■□□□□ 0.85
CACNA1A-221ENST00000636012 PATL2C9JE40 543 aaKnown RBP20.38■□□□□ 0.85
CACNA1A-221ENST00000636012 TMX4Q9H1E5 349 aaPredicted RBP20.38■□□□□ 0.85
CACNA1A-221ENST00000636012 HDGFP51858 240 aaKnown RBP20.37■□□□□ 0.85
CACNA1A-221ENST00000636012 MCCP23508 829 aa20.37■□□□□ 0.85
CACNA1A-221ENST00000636012 KANK1Q14678 1352 aa20.36■□□□□ 0.85
CACNA1A-221ENST00000636012 MS4A1P11836 297 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms