RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 ANO8Q9HCE9 1232 aaPredicted RBP13.08□□□□□ -0.32
SPTAN1-228ENST00000635853 C14orf37Q86TY3 774 aa13.08□□□□□ -0.32
SPTAN1-228ENST00000635853 RSPH6AQ9H0K4 717 aa13.07□□□□□ -0.32
SPTAN1-228ENST00000635853 ABCC9O60706 1549 aa13.07□□□□□ -0.32
SPTAN1-228ENST00000635853 HAP1P54257 671 aaPredicted RBP13.06□□□□□ -0.32
SPTAN1-228ENST00000635853 PKNOX2Q96KN3 472 aa13.05□□□□□ -0.32
SPTAN1-228ENST00000635853 TNNT2P45379 298 aaPredicted RBP13.05□□□□□ -0.32
SPTAN1-228ENST00000635853 TULP1O00294 542 aaPredicted RBP13.04□□□□□ -0.32
SPTAN1-228ENST00000635853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.01□□□□□ -0.332e-7■■■□□ 15.5
SPTAN1-228ENST00000635853 LAS1LQ9Y4W2 734 aaKnown RBP13.01□□□□□ -0.33
SPTAN1-228ENST00000635853 MYH16Q9H6N6 1097 aa12.99□□□□□ -0.33
SPTAN1-228ENST00000635853 ARXQ96QS3 562 aa12.98□□□□□ -0.33
SPTAN1-228ENST00000635853 SALL2Q9Y467 1007 aaPredicted RBP12.96□□□□□ -0.33
SPTAN1-228ENST00000635853 PPP1R15AO75807 674 aaPredicted RBP12.96□□□□□ -0.34
SPTAN1-228ENST00000635853 UBE2Q2Q8WVN8 375 aa12.96□□□□□ -0.34
SPTAN1-228ENST00000635853 NCLP19338 710 aaKnown RBP12.95□□□□□ -0.34
SPTAN1-228ENST00000635853 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.95□□□□□ -0.34
SPTAN1-228ENST00000635853 TRIM44Q96DX7 344 aaPredicted RBP12.95□□□□□ -0.34
SPTAN1-228ENST00000635853 WDR43Q15061 677 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■■■■■ 28
SPTAN1-228ENST00000635853 SENP3Q9H4L4 574 aaPredicted RBP12.95□□□□□ -0.34
SPTAN1-228ENST00000635853 NPHP1O15259 732 aa12.94□□□□□ -0.34
SPTAN1-228ENST00000635853 VSIG10Q8N0Z9 540 aa12.94□□□□□ -0.34
SPTAN1-228ENST00000635853 L1TD1Q5T7N2 865 aaKnown RBP12.93□□□□□ -0.34
SPTAN1-228ENST00000635853 FAM9BQ8IZU0 186 aa12.93□□□□□ -0.34
SPTAN1-228ENST00000635853 IPO9Q96P70 1041 aaKnown RBP12.93□□□□□ -0.34
SPTAN1-228ENST00000635853 USP35Q9P2H5 1018 aa12.93□□□□□ -0.34
SPTAN1-228ENST00000635853 PODXL2Q9NZ53 605 aa12.91□□□□□ -0.34
SPTAN1-228ENST00000635853 CCER2I3L3R5 266 aa12.91□□□□□ -0.34
SPTAN1-228ENST00000635853 ARID4BQ4LE39 1312 aaPredicted RBP12.9□□□□□ -0.35
SPTAN1-228ENST00000635853 TONSLQ96HA7 1378 aa12.9□□□□□ -0.35
SPTAN1-228ENST00000635853 HSP90AA2PQ14568 343 aaPredicted RBP12.89□□□□□ -0.35
SPTAN1-228ENST00000635853 BECN1Q14457 450 aa12.88□□□□□ -0.35
SPTAN1-228ENST00000635853 ZCCHC6Q5VYS8 1495 aaKnown RBP12.87□□□□□ -0.35
SPTAN1-228ENST00000635853 B4GALNT3Q6L9W6 998 aa12.85□□□□□ -0.35
SPTAN1-228ENST00000635853 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
SPTAN1-228ENST00000635853 ZRSR1Q15695 479 aaKnown RBP12.84□□□□□ -0.35
SPTAN1-228ENST00000635853 KDM2AQ9Y2K7 1162 aa12.83□□□□□ -0.35
SPTAN1-228ENST00000635853 TMC1Q8TDI8 760 aa12.83□□□□□ -0.36
SPTAN1-228ENST00000635853 MRS2Q9HD23 443 aa12.83□□□□□ -0.36
SPTAN1-228ENST00000635853 PNNQ9H307 717 aaKnown RBP12.82□□□□□ -0.36
SPTAN1-228ENST00000635853 CEP162Q5TB80 1403 aa12.81□□□□□ -0.36
SPTAN1-228ENST00000635853 CHIC2Q9UKJ5 165 aa12.81□□□□□ -0.36
SPTAN1-228ENST00000635853 TSPY4P0CV99 314 aa12.79□□□□□ -0.36
SPTAN1-228ENST00000635853 TSPY10P0CW01 314 aa12.79□□□□□ -0.36
SPTAN1-228ENST00000635853 LMOD2Q6P5Q4 547 aa12.78□□□□□ -0.36
SPTAN1-228ENST00000635853 CLSTN1O94985 981 aa12.78□□□□□ -0.36
SPTAN1-228ENST00000635853 GSE1Q14687 1217 aa12.78□□□□□ -0.36
SPTAN1-228ENST00000635853 TAOK2Q9UL54 1235 aa12.77□□□□□ -0.36
SPTAN1-228ENST00000635853 TIMELESSQ9UNS1 1208 aa12.77□□□□□ -0.37
SPTAN1-228ENST00000635853 TPRNQ4KMQ1 711 aa12.75□□□□□ -0.37
SPTAN1-228ENST00000635853 CHMP7Q8WUX9 453 aaPredicted RBP12.74□□□□□ -0.37
SPTAN1-228ENST00000635853 CASC1Q6TDU7 716 aa12.74□□□□□ -0.37
SPTAN1-228ENST00000635853 EEA1Q15075 1411 aa12.73□□□□□ -0.37
SPTAN1-228ENST00000635853 IL27Q8NEV9 243 aa12.73□□□□□ -0.37
SPTAN1-228ENST00000635853 GOLGA2Q08379 1002 aa12.73□□□□□ -0.37
SPTAN1-228ENST00000635853 KCNH8Q96L42 1107 aa12.72□□□□□ -0.37
SPTAN1-228ENST00000635853 TCERG1O14776 1098 aaKnown RBP12.71□□□□□ -0.37
SPTAN1-228ENST00000635853 GOLGA6L22H0YM25 854 aa12.7□□□□□ -0.38
SPTAN1-228ENST00000635853 TNIKQ9UKE5 1360 aa12.69□□□□□ -0.38
SPTAN1-228ENST00000635853 HIRIP3Q9BW71 556 aaPredicted RBP12.68□□□□□ -0.38
SPTAN1-228ENST00000635853 CFAP53Q96M91 514 aa12.68□□□□□ -0.38
SPTAN1-228ENST00000635853 PTMAP06454 111 aaKnown RBP12.68□□□□□ -0.38
SPTAN1-228ENST00000635853 MSNP26038 577 aaKnown RBP12.67□□□□□ -0.38
SPTAN1-228ENST00000635853 ISY1Q9ULR0 285 aaKnown RBP12.66□□□□□ -0.38
SPTAN1-228ENST00000635853 MSH5O43196 834 aa12.66□□□□□ -0.38
SPTAN1-228ENST00000635853 FAM43AQ8N2R8 423 aa12.66□□□□□ -0.38
SPTAN1-228ENST00000635853 GOLGA3Q08378 1498 aa12.65□□□□□ -0.38
SPTAN1-228ENST00000635853 A0A0U1RQG5 324 aaPredicted RBP12.65□□□□□ -0.38
SPTAN1-228ENST00000635853 OS9Q13438 667 aaPredicted RBP12.65□□□□□ -0.38
SPTAN1-228ENST00000635853 TRHP20396 242 aaPredicted RBP12.64□□□□□ -0.39
SPTAN1-228ENST00000635853 NAP1L2Q9ULW6 460 aaPredicted RBP12.64□□□□□ -0.39
SPTAN1-228ENST00000635853 GOLGA6L3A6NEY3 463 aa12.64□□□□□ -0.39
SPTAN1-228ENST00000635853 CLIP1P30622 1438 aa12.64□□□□□ -0.39
SPTAN1-228ENST00000635853 FGD1P98174 961 aa12.62□□□□□ -0.39
SPTAN1-228ENST00000635853 GOLGA6L6A8MZA4 724 aa12.62□□□□□ -0.39
SPTAN1-228ENST00000635853 DNTTIP2Q5QJE6 756 aaKnown RBP12.62□□□□□ -0.39
SPTAN1-228ENST00000635853 FTSJ3Q8IY81 847 aaKnown RBP12.61□□□□□ -0.39
SPTAN1-228ENST00000635853 EIF4G2P78344 907 aaKnown RBP eCLIP12.61□□□□□ -0.39
SPTAN1-228ENST00000635853 PRM3Q9NNZ6 103 aa12.6□□□□□ -0.39
SPTAN1-228ENST00000635853 MAPK8IP3Q9UPT6 1336 aa12.6□□□□□ -0.39
SPTAN1-228ENST00000635853 POGKQ9P215 609 aa12.59□□□□□ -0.39
SPTAN1-228ENST00000635853 MTUS2Q5JR59 1369 aa12.59□□□□□ -0.39
SPTAN1-228ENST00000635853 RRP9O43818 475 aaKnown RBP12.57□□□□□ -0.4
SPTAN1-228ENST00000635853 RGL3Q3MIN7 710 aa12.57□□□□□ -0.4
SPTAN1-228ENST00000635853 KCNJ4P48050 445 aa12.57□□□□□ -0.4
SPTAN1-228ENST00000635853 BRPF3Q9ULD4 1205 aa12.57□□□□□ -0.4
SPTAN1-228ENST00000635853 PTMSP20962 102 aa12.56□□□□□ -0.4
SPTAN1-228ENST00000635853 PLCB2Q00722 1185 aa12.55□□□□□ -0.4
SPTAN1-228ENST00000635853 TMX4Q9H1E5 349 aaPredicted RBP12.55□□□□□ -0.4
SPTAN1-228ENST00000635853 WRNQ14191 1432 aaPredicted RBP eCLIP12.55□□□□□ -0.4
SPTAN1-228ENST00000635853 CDCA8Q53HL2 280 aa12.54□□□□□ -0.4
SPTAN1-228ENST00000635853 KNSTRNQ9Y448 316 aa12.54□□□□□ -0.4
SPTAN1-228ENST00000635853 AMER1Q5JTC6 1135 aaPredicted RBP12.54□□□□□ -0.4
SPTAN1-228ENST00000635853 PLEKHD1A6NEE1 506 aa12.54□□□□□ -0.4
SPTAN1-228ENST00000635853 NUDCQ9Y266 331 aa12.53□□□□□ -0.4
SPTAN1-228ENST00000635853 RRP7BPQ9NSQ0 103 aa12.52□□□□□ -0.4
SPTAN1-228ENST00000635853 NEUROD2Q15784 382 aa12.52□□□□□ -0.41
SPTAN1-228ENST00000635853 TPM2P07951 284 aa12.51□□□□□ -0.41
SPTAN1-228ENST00000635853 FRAT1Q92837 279 aaPredicted RBP12.5□□□□□ -0.41
SPTAN1-228ENST00000635853 PDE4AP27815 886 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms