RNA–Protein interactions for RNA: ENST00000635849.1

ARID1B-210, Transcript of AT-rich interaction domain 1B, human

APPRIS ALT2 TSL 5 BASIC

Gene ARID1B, Length 5,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1B-210	ENST00000635849	RB1CC1	Q8TDY2	1594 aa		13.81	□□□□□ -0.2
ARID1B-210	ENST00000635849	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.8	□□□□□ -0.2
ARID1B-210	ENST00000635849	LAS1L	Q9Y4W2	734 aa	Known RBP	13.79	□□□□□ -0.2
ARID1B-210	ENST00000635849	MYH16	Q9H6N6	1097 aa		13.78	□□□□□ -0.2
ARID1B-210	ENST00000635849	TPRN	Q4KMQ1	711 aa		13.77	□□□□□ -0.2
ARID1B-210	ENST00000635849	PLPPR3	Q6T4P5	718 aa		13.77	□□□□□ -0.21
ARID1B-210	ENST00000635849	PPM1G	O15355	546 aa	Predicted RBP	13.76	□□□□□ -0.21
ARID1B-210	ENST00000635849	SENP3-EIF4A1	A0A087X0R7	540 aa		13.74	□□□□□ -0.21
ARID1B-210	ENST00000635849	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.72	□□□□□ -0.21
ARID1B-210	ENST00000635849	STAG3	Q9UJ98	1225 aa		13.7	□□□□□ -0.22
ARID1B-210	ENST00000635849	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.7	□□□□□ -0.22
ARID1B-210	ENST00000635849	KDM2A	Q9Y2K7	1162 aa		13.69	□□□□□ -0.22
ARID1B-210	ENST00000635849	NOP58	Q9Y2X3	529 aa	Known RBP	13.69	□□□□□ -0.22
ARID1B-210	ENST00000635849	ZRSR1	Q15695	479 aa	Known RBP	13.69	□□□□□ -0.22
ARID1B-210	ENST00000635849	CHIC2	Q9UKJ5	165 aa		13.69	□□□□□ -0.22
ARID1B-210	ENST00000635849	PLCB2	Q00722	1185 aa		13.68	□□□□□ -0.22
ARID1B-210	ENST00000635849	NPM1	P06748	294 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
ARID1B-210	ENST00000635849	MYO15B	Q96JP2	1530 aa		13.64	□□□□□ -0.23
ARID1B-210	ENST00000635849	DEK	P35659	375 aa	Known RBP	13.64	□□□□□ -0.23
ARID1B-210	ENST00000635849	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.64	□□□□□ -0.23	1e-6	■■□□□ 12.8
ARID1B-210	ENST00000635849	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.63	□□□□□ -0.23
ARID1B-210	ENST00000635849	ESF1	Q9H501	851 aa	Known RBP	13.63	□□□□□ -0.23
ARID1B-210	ENST00000635849	RGS3	P49796	1198 aa		13.61	□□□□□ -0.23
ARID1B-210	ENST00000635849	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
ARID1B-210	ENST00000635849	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.58	□□□□□ -0.23
ARID1B-210	ENST00000635849	PPP4R2	Q9NY27	417 aa		13.58	□□□□□ -0.24
ARID1B-210	ENST00000635849	RSF1	Q96T23	1441 aa	Predicted RBP	13.56	□□□□□ -0.24
ARID1B-210	ENST00000635849	TULP1	O00294	542 aa	Predicted RBP	13.56	□□□□□ -0.24
ARID1B-210	ENST00000635849	CASC1	Q6TDU7	716 aa		13.56	□□□□□ -0.24
ARID1B-210	ENST00000635849	CLIP1	P30622	1438 aa		13.54	□□□□□ -0.24
ARID1B-210	ENST00000635849	ERCC6	Q03468	1493 aa		13.54	□□□□□ -0.24
ARID1B-210	ENST00000635849	NACAD	O15069	1562 aa		13.54	□□□□□ -0.24
ARID1B-210	ENST00000635849	B4GALNT3	Q6L9W6	998 aa		13.54	□□□□□ -0.24
ARID1B-210	ENST00000635849	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.54	□□□□□ -0.24
ARID1B-210	ENST00000635849		A0A0G2JS52	829 aa		13.53	□□□□□ -0.24
ARID1B-210	ENST00000635849	HSP90AB1	P08238	724 aa	Known RBP	13.53	□□□□□ -0.24
ARID1B-210	ENST00000635849	FTSJ3	Q8IY81	847 aa	Known RBP	13.53	□□□□□ -0.24
ARID1B-210	ENST00000635849	TAOK2	Q9UL54	1235 aa		13.53	□□□□□ -0.24
ARID1B-210	ENST00000635849	MSN	P26038	577 aa	Known RBP	13.53	□□□□□ -0.24
ARID1B-210	ENST00000635849	CHAF1A	Q13111	956 aa	Predicted RBP	13.52	□□□□□ -0.25
ARID1B-210	ENST00000635849	EEA1	Q15075	1411 aa		13.51	□□□□□ -0.25
ARID1B-210	ENST00000635849	ARID3A	Q99856	593 aa		13.51	□□□□□ -0.25
ARID1B-210	ENST00000635849	GOLGA6L6	A8MZA4	724 aa		13.51	□□□□□ -0.25
ARID1B-210	ENST00000635849	PLEKHG5	O94827	1062 aa		13.51	□□□□□ -0.25
ARID1B-210	ENST00000635849	SENP3	Q9H4L4	574 aa	Predicted RBP	13.51	□□□□□ -0.25
ARID1B-210	ENST00000635849	ZBTB7C	A1YPR0	619 aa		13.5	□□□□□ -0.25
ARID1B-210	ENST00000635849	L1TD1	Q5T7N2	865 aa	Known RBP	13.49	□□□□□ -0.25
ARID1B-210	ENST00000635849	NEUROD2	Q15784	382 aa		13.49	□□□□□ -0.25
ARID1B-210	ENST00000635849	RBM19	Q9Y4C8	960 aa	Known RBP	13.48	□□□□□ -0.25
ARID1B-210	ENST00000635849	NRDC	O43847	1150 aa		13.47	□□□□□ -0.25
ARID1B-210	ENST00000635849	SPRYD3	Q8NCJ5	442 aa		13.47	□□□□□ -0.25
ARID1B-210	ENST00000635849	FRAT1	Q92837	279 aa	Predicted RBP	13.47	□□□□□ -0.25
ARID1B-210	ENST00000635849	CEP162	Q5TB80	1403 aa		13.47	□□□□□ -0.25
ARID1B-210	ENST00000635849	TSPY4	P0CV99	314 aa		13.45	□□□□□ -0.26
ARID1B-210	ENST00000635849	TSPY10	P0CW01	314 aa		13.45	□□□□□ -0.26
ARID1B-210	ENST00000635849	BAZ1B	Q9UIG0	1483 aa	Known RBP	13.45	□□□□□ -0.26
ARID1B-210	ENST00000635849	GOLGA3	Q08378	1498 aa		13.44	□□□□□ -0.26
ARID1B-210	ENST00000635849	RRP7BP	Q9NSQ0	103 aa		13.44	□□□□□ -0.26
ARID1B-210	ENST00000635849	HSCB	Q8IWL3	235 aa		13.43	□□□□□ -0.26
ARID1B-210	ENST00000635849	CFAP53	Q96M91	514 aa		13.43	□□□□□ -0.26
ARID1B-210	ENST00000635849	C14orf37	Q86TY3	774 aa		13.43	□□□□□ -0.26
ARID1B-210	ENST00000635849	GOLGA6L4	A6NEF3	574 aa		13.42	□□□□□ -0.26
ARID1B-210	ENST00000635849	DRC7	Q8IY82	874 aa		13.42	□□□□□ -0.26
ARID1B-210	ENST00000635849	MTUS2	Q5JR59	1369 aa		13.42	□□□□□ -0.26
ARID1B-210	ENST00000635849	KNSTRN	Q9Y448	316 aa		13.42	□□□□□ -0.26
ARID1B-210	ENST00000635849	FGD1	P98174	961 aa		13.42	□□□□□ -0.26
ARID1B-210	ENST00000635849	PNN	Q9H307	717 aa	Known RBP	13.41	□□□□□ -0.26
ARID1B-210	ENST00000635849	RGL3	Q3MIN7	710 aa		13.4	□□□□□ -0.26
ARID1B-210	ENST00000635849	TNIK	Q9UKE5	1360 aa		13.4	□□□□□ -0.26
ARID1B-210	ENST00000635849	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.4	□□□□□ -0.26
ARID1B-210	ENST00000635849	GZF1	Q9H116	711 aa	Predicted RBP	13.39	□□□□□ -0.27
ARID1B-210	ENST00000635849	TNNT3	P45378	269 aa	Predicted RBP	13.38	□□□□□ -0.27
ARID1B-210	ENST00000635849	KCNJ4	P48050	445 aa		13.38	□□□□□ -0.27
ARID1B-210	ENST00000635849	KCNH8	Q96L42	1107 aa		13.38	□□□□□ -0.27
ARID1B-210	ENST00000635849	WRN	Q14191	1432 aa	Predicted RBP eCLIP	13.37	□□□□□ -0.27
ARID1B-210	ENST00000635849	MAPK8IP3	Q9UPT6	1336 aa		13.35	□□□□□ -0.27
ARID1B-210	ENST00000635849	OS9	Q13438	667 aa	Predicted RBP	13.34	□□□□□ -0.27
ARID1B-210	ENST00000635849	CARD11	Q9BXL7	1154 aa		13.33	□□□□□ -0.28
ARID1B-210	ENST00000635849	KIAA2012	Q0VF49	1180 aa		13.33	□□□□□ -0.28
ARID1B-210	ENST00000635849	SLK	Q9H2G2	1235 aa	Predicted RBP	13.32	□□□□□ -0.28
ARID1B-210	ENST00000635849	CEP164	Q9UPV0	1460 aa		13.31	□□□□□ -0.28
ARID1B-210	ENST00000635849	CC2D1B	Q5T0F9	858 aa	Known RBP	13.31	□□□□□ -0.28
ARID1B-210	ENST00000635849	CDCA8	Q53HL2	280 aa		13.31	□□□□□ -0.28
ARID1B-210	ENST00000635849	CHMP4B	Q9H444	224 aa	Known RBP	13.3	□□□□□ -0.28
ARID1B-210	ENST00000635849	MS4A1	P11836	297 aa		13.29	□□□□□ -0.28
ARID1B-210	ENST00000635849	PPP1R15A	O75807	674 aa	Predicted RBP	13.29	□□□□□ -0.28
ARID1B-210	ENST00000635849	TRH	P20396	242 aa	Predicted RBP	13.29	□□□□□ -0.28
ARID1B-210	ENST00000635849	NUDC	Q9Y266	331 aa		13.29	□□□□□ -0.28
ARID1B-210	ENST00000635849	SIN3A	Q96ST3	1273 aa		13.29	□□□□□ -0.28
ARID1B-210	ENST00000635849	NCBP3	Q53F19	620 aa	Known RBP	13.28	□□□□□ -0.28
ARID1B-210	ENST00000635849	GBP4	Q96PP9	640 aa		13.28	□□□□□ -0.28
ARID1B-210	ENST00000635849	MCC	P23508	829 aa		13.26	□□□□□ -0.29
ARID1B-210	ENST00000635849	U2SURP	O15042	1029 aa	Known RBP	13.26	□□□□□ -0.29
ARID1B-210	ENST00000635849	TSHZ2	Q9NRE2	1034 aa		13.26	□□□□□ -0.29
ARID1B-210	ENST00000635849	KIF27	Q86VH2	1401 aa		13.26	□□□□□ -0.29
ARID1B-210	ENST00000635849	GOLGA6L3	A6NEY3	463 aa		13.26	□□□□□ -0.29
ARID1B-210	ENST00000635849	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.24	□□□□□ -0.29
ARID1B-210	ENST00000635849	VSIG10	Q8N0Z9	540 aa		13.23	□□□□□ -0.29
ARID1B-210	ENST00000635849	CLSTN1	O94985	981 aa		13.23	□□□□□ -0.29
ARID1B-210	ENST00000635849	APBB1	O00213	710 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms