RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 SPDYE2Q495Y8 402 aa9.08□□□□□ -0.96
CDRT1-208ENST00000630868 TRIM41Q8WV44 630 aa9.06□□□□□ -0.96
CDRT1-208ENST00000630868 ZBTB47Q9UFB7 747 aaPredicted RBP9.04□□□□□ -0.96
CDRT1-208ENST00000630868 GTPBP6O43824 516 aaPredicted RBP9.02□□□□□ -0.97
CDRT1-208ENST00000630868 C1QBPQ07021 282 aaKnown RBP9.01□□□□□ -0.97
CDRT1-208ENST00000630868 RB1CC1Q8TDY2 1594 aa9□□□□□ -0.97
CDRT1-208ENST00000630868 PLEKHG5O94827 1062 aa8.98□□□□□ -0.97
CDRT1-208ENST00000630868 ARXQ96QS3 562 aa8.98□□□□□ -0.97
CDRT1-208ENST00000630868 TMEM132AQ24JP5 1023 aa8.96□□□□□ -0.98
CDRT1-208ENST00000630868 RIOK3O14730 519 aaKnown RBP8.95□□□□□ -0.98
CDRT1-208ENST00000630868 DSG3P32926 999 aa8.95□□□□□ -0.98
CDRT1-208ENST00000630868 GSE1Q14687 1217 aa8.94□□□□□ -0.98
CDRT1-208ENST00000630868 NUBP1P53384 320 aa8.93□□□□□ -0.98
CDRT1-208ENST00000630868 DAXXQ9UER7 740 aaPredicted RBP8.93□□□□□ -0.98
CDRT1-208ENST00000630868 NACADO15069 1562 aa8.93□□□□□ -0.98
CDRT1-208ENST00000630868 STK25O00506 426 aa8.91□□□□□ -0.98
CDRT1-208ENST00000630868 ERICH6Q7L0X2 663 aa8.91□□□□□ -0.98
CDRT1-208ENST00000630868 VGFO15240 615 aaPredicted RBP8.86□□□□□ -0.99
CDRT1-208ENST00000630868 C14orf37Q86TY3 774 aa8.86□□□□□ -0.99
CDRT1-208ENST00000630868 DCAF8Q5TAQ9 597 aa8.85□□□□□ -0.99
CDRT1-208ENST00000630868 BCL11BQ9C0K0 894 aaPredicted RBP8.82□□□□□ -1
CDRT1-208ENST00000630868 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.81□□□□□ -1
CDRT1-208ENST00000630868 P3H3Q8IVL6 736 aa8.81□□□□□ -1
CDRT1-208ENST00000630868 KCNV2Q8TDN2 545 aa8.81□□□□□ -1
CDRT1-208ENST00000630868 ZFP91Q96JP5 570 aaPredicted RBP8.81□□□□□ -1
CDRT1-208ENST00000630868 STK24Q9Y6E0 443 aa8.81□□□□□ -1
CDRT1-208ENST00000630868 LMOD2Q6P5Q4 547 aa8.8□□□□□ -1
CDRT1-208ENST00000630868 HOMEZQ8IX15 550 aa8.8□□□□□ -1
CDRT1-208ENST00000630868 MYO15BQ96JP2 1530 aa8.8□□□□□ -1
CDRT1-208ENST00000630868 SGIP1Q9BQI5 828 aa8.79□□□□□ -1
CDRT1-208ENST00000630868 BICRAQ9NZM4 1560 aa8.78□□□□□ -1
CDRT1-208ENST00000630868 UNC13AQ9UPW8 1703 aa8.78□□□□□ -1
CDRT1-208ENST00000630868 FAM212AQ96EL1 285 aa8.78□□□□□ -1
CDRT1-208ENST00000630868 BRPF1P55201 1214 aaPredicted RBP8.77□□□□□ -1.01
CDRT1-208ENST00000630868 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.77□□□□□ -1.01
CDRT1-208ENST00000630868 CADPS2Q86UW7 1296 aa8.77□□□□□ -1.01
CDRT1-208ENST00000630868 CHRM1P11229 460 aaPredicted RBP8.76□□□□□ -1.01
CDRT1-208ENST00000630868 RYDENQ9NUL5 291 aaKnown RBP8.76□□□□□ -1.01
CDRT1-208ENST00000630868 MNX1P50219 401 aaPredicted RBP8.75□□□□□ -1.01
CDRT1-208ENST00000630868 RASEFQ8IZ41 740 aa8.75□□□□□ -1.01
CDRT1-208ENST00000630868 CREBZFQ9NS37 354 aa8.72□□□□□ -1.01
CDRT1-208ENST00000630868 PYGBP11216 843 aa8.69□□□□□ -1.02
CDRT1-208ENST00000630868 SHROOM4Q9ULL8 1493 aa8.69□□□□□ -1.02
CDRT1-208ENST00000630868 WDR70Q9NW82 654 aa8.67□□□□□ -1.02
CDRT1-208ENST00000630868 ZC3H15Q8WU90 426 aaKnown RBP8.65□□□□□ -1.02
CDRT1-208ENST00000630868 NEUROD2Q15784 382 aa8.64□□□□□ -1.03
CDRT1-208ENST00000630868 SPDYE1Q8NFV5 336 aaPredicted RBP8.64□□□□□ -1.03
CDRT1-208ENST00000630868 SUPT5HO00267 1087 aaKnown RBP8.63□□□□□ -1.03
CDRT1-208ENST00000630868 CECR2Q9BXF3 1484 aa8.62□□□□□ -1.03
CDRT1-208ENST00000630868 SLC24A3Q9HC58 644 aa8.61□□□□□ -1.03
CDRT1-208ENST00000630868 CC2D2AQ9P2K1 1620 aa8.61□□□□□ -1.03
CDRT1-208ENST00000630868 DCAF1Q9Y4B6 1507 aa8.6□□□□□ -1.03
CDRT1-208ENST00000630868 CLEC11AQ9Y240 323 aa8.59□□□□□ -1.03
CDRT1-208ENST00000630868 PRR29P0C7W0 189 aa8.58□□□□□ -1.04
CDRT1-208ENST00000630868 ARHGEF1Q92888 912 aaKnown RBP8.58□□□□□ -1.04
CDRT1-208ENST00000630868 MFRPQ9BY79 579 aa8.57□□□□□ -1.04
CDRT1-208ENST00000630868 ZCCHC6Q5VYS8 1495 aaKnown RBP8.57□□□□□ -1.04
CDRT1-208ENST00000630868 EIF4G1Q04637 1599 aaKnown RBP8.56□□□□□ -1.04
CDRT1-208ENST00000630868 TESPA1A2RU30 521 aaPredicted RBP8.56□□□□□ -1.04
CDRT1-208ENST00000630868 SEMA3EO15041 775 aa8.56□□□□□ -1.04
CDRT1-208ENST00000630868 ZNF467Q7Z7K2 595 aaPredicted RBP8.53□□□□□ -1.04
CDRT1-208ENST00000630868 PPP1R37O75864 691 aa8.52□□□□□ -1.05
CDRT1-208ENST00000630868 PDAP1Q13442 181 aaKnown RBP8.52□□□□□ -1.05
CDRT1-208ENST00000630868 E2F4Q16254 413 aa8.52□□□□□ -1.05
CDRT1-208ENST00000630868 AKT1S1Q96B36 256 aa8.51□□□□□ -1.05
CDRT1-208ENST00000630868 ZMYND10O75800 440 aa8.5□□□□□ -1.05
CDRT1-208ENST00000630868 PCDHB8Q9UN66 801 aa8.5□□□□□ -1.05
CDRT1-208ENST00000630868 PCDHB13Q9Y5F0 798 aa8.5□□□□□ -1.05
CDRT1-208ENST00000630868 SCRIBQ14160 1630 aa8.48□□□□□ -1.05
CDRT1-208ENST00000630868 REM2Q8IYK8 340 aaPredicted RBP8.47□□□□□ -1.05
CDRT1-208ENST00000630868 FBXO22Q8NEZ5 403 aa8.46□□□□□ -1.06
CDRT1-208ENST00000630868 TSPYL2Q9H2G4 693 aaPredicted RBP8.46□□□□□ -1.06
CDRT1-208ENST00000630868 UBTFP17480 764 aaKnown RBP8.45□□□□□ -1.06
CDRT1-208ENST00000630868 PSEN1P49768 467 aa8.45□□□□□ -1.06
CDRT1-208ENST00000630868 PODXL2Q9NZ53 605 aa8.45□□□□□ -1.06
CDRT1-208ENST00000630868 NCKAP5LQ9HCH0 1330 aa8.44□□□□□ -1.06
CDRT1-208ENST00000630868 BARGINQ6ZT62 677 aa8.43□□□□□ -1.06
CDRT1-208ENST00000630868 RBM42Q9BTD8 480 aaKnown RBP8.43□□□□□ -1.06
CDRT1-208ENST00000630868 GPBP1L1Q9HC44 474 aaPredicted RBP8.43□□□□□ -1.06
CDRT1-208ENST00000630868 PITPNM1O00562 1244 aa8.4□□□□□ -1.06
CDRT1-208ENST00000630868 CACNB1Q02641 598 aaPredicted RBP8.4□□□□□ -1.06
CDRT1-208ENST00000630868 EFCAB3Q8N7B9 438 aa8.4□□□□□ -1.06
CDRT1-208ENST00000630868 PHF8Q9UPP1 1060 aa8.4□□□□□ -1.06
CDRT1-208ENST00000630868 ZNF579Q8NAF0 562 aaKnown RBP8.39□□□□□ -1.07
CDRT1-208ENST00000630868 NLRP6P59044 892 aa8.38□□□□□ -1.07
CDRT1-208ENST00000630868 MFSD10Q14728 455 aa8.38□□□□□ -1.07
CDRT1-208ENST00000630868 SMYD5Q6GMV2 418 aa8.38□□□□□ -1.07
CDRT1-208ENST00000630868 CCDC61Q9Y6R9 512 aa8.38□□□□□ -1.07
CDRT1-208ENST00000630868 CHADLQ6NUI6 762 aa8.37□□□□□ -1.07
CDRT1-208ENST00000630868 LARP6Q9BRS8 491 aaKnown RBP8.37□□□□□ -1.07
CDRT1-208ENST00000630868 AK7Q96M32 723 aa8.36□□□□□ -1.07
CDRT1-208ENST00000630868 CABP2Q9NPB3 220 aa8.36□□□□□ -1.07
CDRT1-208ENST00000630868 ARIH1Q9Y4X5 557 aaPredicted RBP8.36□□□□□ -1.07
CDRT1-208ENST00000630868 RBM26Q5T8P6 1007 aaKnown RBP8.35□□□□□ -1.07
CDRT1-208ENST00000630868 IL27Q8NEV9 243 aa8.35□□□□□ -1.07
CDRT1-208ENST00000630868 ZMYND15Q9H091 742 aa8.35□□□□□ -1.07
CDRT1-208ENST00000630868 CRISPLD2Q9H0B8 497 aa8.35□□□□□ -1.07
CDRT1-208ENST00000630868 KDM4CQ9H3R0 1056 aa8.35□□□□□ -1.07
CDRT1-208ENST00000630868 SOX12O15370 315 aa8.34□□□□□ -1.07
CDRT1-208ENST00000630868 IFNL1Q8IU54 200 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms