RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 MNX1P50219 401 aaPredicted RBP6.07□□□□□ -1.44
SPTAN1-216ENST00000629047 ATN1P54259 1190 aaPredicted RBP6.06□□□□□ -1.44
SPTAN1-216ENST00000629047 SLC39A7Q92504 469 aa6.06□□□□□ -1.44
SPTAN1-216ENST00000629047 PAK3O75914 559 aaPredicted RBP6.05□□□□□ -1.44
SPTAN1-216ENST00000629047 TRPC6Q9Y210 931 aa6.05□□□□□ -1.44
SPTAN1-216ENST00000629047 C7P10643 843 aa6.04□□□□□ -1.44
SPTAN1-216ENST00000629047 CDAN1Q8IWY9 1227 aa6.02□□□□□ -1.45
SPTAN1-216ENST00000629047 MAMSTRQ6ZN01 415 aa6□□□□□ -1.45
SPTAN1-216ENST00000629047 SCUBE2Q9NQ36 999 aa6□□□□□ -1.45
SPTAN1-216ENST00000629047 BMP2KQ9NSY1 1161 aaPredicted RBP5.99□□□□□ -1.45
SPTAN1-216ENST00000629047 TSPYL2Q9H2G4 693 aaPredicted RBP5.98□□□□□ -1.45
SPTAN1-216ENST00000629047 COLQQ9Y215 455 aaPredicted RBP5.98□□□□□ -1.45
SPTAN1-216ENST00000629047 STAG3Q9UJ98 1225 aa5.97□□□□□ -1.45
SPTAN1-216ENST00000629047 NPM1P06748 294 aaKnown RBP eCLIP5.95□□□□□ -1.46
SPTAN1-216ENST00000629047 CCDC61Q9Y6R9 512 aa5.94□□□□□ -1.46
SPTAN1-216ENST00000629047 KIF12Q96FN5 646 aa5.93□□□□□ -1.46
SPTAN1-216ENST00000629047 SPDYE4A6NLX3 237 aa5.92□□□□□ -1.46
SPTAN1-216ENST00000629047 ST18O60284 1047 aa5.92□□□□□ -1.46
SPTAN1-216ENST00000629047 MMRN1Q13201 1228 aa5.92□□□□□ -1.46
SPTAN1-216ENST00000629047 MAP3K13O43283 966 aa5.9□□□□□ -1.46
SPTAN1-216ENST00000629047 SPNS2Q8IVW8 549 aa5.89□□□□□ -1.47
SPTAN1-216ENST00000629047 TTLL13PA6NNM8 815 aa5.88□□□□□ -1.47
SPTAN1-216ENST00000629047 SLAIN1Q8ND83 568 aa5.87□□□□□ -1.47
SPTAN1-216ENST00000629047 SEC24BO95487 1268 aa5.85□□□□□ -1.47
SPTAN1-216ENST00000629047 TIE1P35590 1138 aa5.85□□□□□ -1.47
SPTAN1-216ENST00000629047 RASEFQ8IZ41 740 aa5.85□□□□□ -1.47
SPTAN1-216ENST00000629047 MARVELD3Q96A59 401 aa5.84□□□□□ -1.47
SPTAN1-216ENST00000629047 TRIM35Q9UPQ4 493 aa5.84□□□□□ -1.47
SPTAN1-216ENST00000629047 CSRNP3Q8WYN3 585 aa5.81□□□□□ -1.48
SPTAN1-216ENST00000629047 POTEB3A0JP26 581 aa5.78□□□□□ -1.48
SPTAN1-216ENST00000629047 POTEBQ6S5H4 581 aa5.78□□□□□ -1.48
SPTAN1-216ENST00000629047 IER5LQ5T953 404 aa5.75□□□□□ -1.49
SPTAN1-216ENST00000629047 IFNL1Q8IU54 200 aa5.75□□□□□ -1.49
SPTAN1-216ENST00000629047 KRTAP3-3Q9BYR6 98 aa5.75□□□□□ -1.49
SPTAN1-216ENST00000629047 KRTAP3-2Q9BYR7 98 aa5.75□□□□□ -1.49
SPTAN1-216ENST00000629047 PCDHB13Q9Y5F0 798 aa5.75□□□□□ -1.49
SPTAN1-216ENST00000629047 PLCG2P16885 1265 aa5.73□□□□□ -1.49
SPTAN1-216ENST00000629047 IRX5P78411 483 aaPredicted RBP5.73□□□□□ -1.49
SPTAN1-216ENST00000629047 TMEM106CQ9BVX2 250 aa5.73□□□□□ -1.49
SPTAN1-216ENST00000629047 PROM2Q8N271 834 aa5.72□□□□□ -1.49
SPTAN1-216ENST00000629047 TMEM121BQ9BXQ6 578 aaPredicted RBP5.7□□□□□ -1.5
SPTAN1-216ENST00000629047 EMP3P54852 163 aa5.68□□□□□ -1.5
SPTAN1-216ENST00000629047 HS3ST6Q96QI5 342 aa5.68□□□□□ -1.5
SPTAN1-216ENST00000629047 FAM205CA6NFA0 338 aa5.67□□□□□ -1.5
SPTAN1-216ENST00000629047 MIER1Q8N108 512 aa5.67□□□□□ -1.5
SPTAN1-216ENST00000629047 NUBP1P53384 320 aa5.66□□□□□ -1.5
SPTAN1-216ENST00000629047 SGIP1Q9BQI5 828 aa5.64□□□□□ -1.51
SPTAN1-216ENST00000629047 OCEL1Q9H607 264 aa5.64□□□□□ -1.51
SPTAN1-216ENST00000629047 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.64□□□□□ -1.51
SPTAN1-216ENST00000629047 SNPHO15079 494 aa5.61□□□□□ -1.51
SPTAN1-216ENST00000629047 PDCD7Q8N8D1 485 aaKnown RBP5.61□□□□□ -1.51
SPTAN1-216ENST00000629047 PCDHB8Q9UN66 801 aa5.61□□□□□ -1.51
SPTAN1-216ENST00000629047 PYGBP11216 843 aa5.58□□□□□ -1.52
SPTAN1-216ENST00000629047 PLCD3Q8N3E9 789 aa5.58□□□□□ -1.52
SPTAN1-216ENST00000629047 EHMT2Q96KQ7 1210 aa5.58□□□□□ -1.52
SPTAN1-216ENST00000629047 PLEKHG5O94827 1062 aa5.57□□□□□ -1.52
SPTAN1-216ENST00000629047 C3orf67Q6ZVT6 689 aa5.57□□□□□ -1.52
SPTAN1-216ENST00000629047 RNF166Q96A37 237 aaPredicted RBP5.56□□□□□ -1.52
SPTAN1-216ENST00000629047 FAM212AQ96EL1 285 aa5.55□□□□□ -1.52
SPTAN1-216ENST00000629047 HOXB3P14651 431 aaPredicted RBP5.54□□□□□ -1.52
SPTAN1-216ENST00000629047 DPY19L2Q6NUT2 758 aa5.53□□□□□ -1.52
SPTAN1-216ENST00000629047 DCAF8Q5TAQ9 597 aa5.49□□□□□ -1.53
SPTAN1-216ENST00000629047 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.49□□□□□ -1.53
SPTAN1-216ENST00000629047 MYT1LQ9UL68 1186 aa5.48□□□□□ -1.53
SPTAN1-216ENST00000629047 ERBB3P21860 1342 aa5.48□□□□□ -1.53
SPTAN1-216ENST00000629047 HOXB1P14653 301 aaPredicted RBP5.47□□□□□ -1.53
SPTAN1-216ENST00000629047 VARS2Q5ST30 1063 aaKnown RBP5.47□□□□□ -1.53
SPTAN1-216ENST00000629047 L3MBTL3Q96JM7 780 aaPredicted RBP5.47□□□□□ -1.53
SPTAN1-216ENST00000629047 MKRN3Q13064 507 aaKnown RBP5.46□□□□□ -1.54
SPTAN1-216ENST00000629047 ILDR1Q86SU0 546 aaPredicted RBP5.43□□□□□ -1.54
SPTAN1-216ENST00000629047 ZBTB47Q9UFB7 747 aaPredicted RBP5.43□□□□□ -1.54
SPTAN1-216ENST00000629047 PSEN1P49768 467 aa5.42□□□□□ -1.54
SPTAN1-216ENST00000629047 GOLGA2Q08379 1002 aa5.42□□□□□ -1.54
SPTAN1-216ENST00000629047 ZNF710Q8N1W2 664 aa5.42□□□□□ -1.54
SPTAN1-216ENST00000629047 BOLA1Q9Y3E2 137 aa5.41□□□□□ -1.54
SPTAN1-216ENST00000629047 TMEM92Q6UXU6 159 aa5.4□□□□□ -1.54
SPTAN1-216ENST00000629047 ZNF687Q8N1G0 1237 aa5.38□□□□□ -1.55
SPTAN1-216ENST00000629047 CABP2Q9NPB3 220 aa5.38□□□□□ -1.55
SPTAN1-216ENST00000629047 DOK7Q18PE1 504 aa5.37□□□□□ -1.55
SPTAN1-216ENST00000629047 ANKRD13DQ6ZTN6 518 aa5.37□□□□□ -1.55
SPTAN1-216ENST00000629047 ZNF467Q7Z7K2 595 aaPredicted RBP5.37□□□□□ -1.55
SPTAN1-216ENST00000629047 KHSRPQ92945 711 aaKnown RBP eCLIP5.37□□□□□ -1.55
SPTAN1-216ENST00000629047 GPR153Q6NV75 609 aa5.34□□□□□ -1.55
SPTAN1-216ENST00000629047 PLA2G2EQ9NZK7 142 aa5.34□□□□□ -1.55
SPTAN1-216ENST00000629047 POTEEQ6S8J3 1075 aa5.33□□□□□ -1.56
SPTAN1-216ENST00000629047 G3V3G9 751 aa5.32□□□□□ -1.56
SPTAN1-216ENST00000629047 ARSIQ5FYB1 569 aa5.32□□□□□ -1.56
SPTAN1-216ENST00000629047 LSM11P83369 360 aaKnown RBP eCLIP5.31□□□□□ -1.56
SPTAN1-216ENST00000629047 PDAP1Q13442 181 aaKnown RBP5.31□□□□□ -1.56
SPTAN1-216ENST00000629047 RIMBP2O15034 1052 aa5.3□□□□□ -1.56
SPTAN1-216ENST00000629047 FKBP8Q14318 412 aa5.29□□□□□ -1.56
SPTAN1-216ENST00000629047 MICALL2Q8IY33 904 aa5.29□□□□□ -1.56
SPTAN1-216ENST00000629047 AXIN2Q9Y2T1 843 aa5.29□□□□□ -1.56
SPTAN1-216ENST00000629047 CHRM1P11229 460 aaPredicted RBP5.28□□□□□ -1.56
SPTAN1-216ENST00000629047 PTGER2P43116 358 aa5.28□□□□□ -1.56
SPTAN1-216ENST00000629047 GSE1Q14687 1217 aa5.28□□□□□ -1.56
SPTAN1-216ENST00000629047 EFCAB3Q8N7B9 438 aa5.28□□□□□ -1.56
SPTAN1-216ENST00000629047 ZNF316A6NFI3 1004 aaPredicted RBP5.27□□□□□ -1.57
SPTAN1-216ENST00000629047 KLHL34Q8N239 644 aa5.26□□□□□ -1.57
SPTAN1-216ENST00000629047 ZSWIM6Q9HCJ5 1215 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms