RNA–Protein interactions for RNA: ENST00000627566.1

KCNIP4-IT1-201, KCNIP4 intronic transcript 1, humanhuman

BASIC

Gene KCNIP4-IT1, Length 9,848 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-IT1-201ENST00000627566 CACNA1FO60840 1977 aa3.92□□□□□ -1.78
KCNIP4-IT1-201ENST00000627566 LRRIQ1Q96JM4 1722 aa3.92□□□□□ -1.78
KCNIP4-IT1-201ENST00000627566 SCRIBQ14160 1630 aa3.92□□□□□ -1.78
KCNIP4-IT1-201ENST00000627566 HMGB3O15347 200 aaKnown RBP3.91□□□□□ -1.78
KCNIP4-IT1-201ENST00000627566 PNNQ9H307 717 aaKnown RBP3.91□□□□□ -1.78
KCNIP4-IT1-201ENST00000627566 SMARCA4P51532 1647 aa3.9□□□□□ -1.78
KCNIP4-IT1-201ENST00000627566 ANP32CO43423 234 aa3.9□□□□□ -1.78
KCNIP4-IT1-201ENST00000627566 PDE4CQ08493 712 aa3.9□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 ZNF526Q8TF50 670 aaPredicted RBP3.9□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 VIRMAQ69YN4 1812 aaKnown RBP3.89□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 MEX3CQ5U5Q3 659 aaKnown RBP3.89□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 CTTNBP2Q8WZ74 1663 aa3.89□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 GTF3C3Q9Y5Q9 886 aa3.87□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 NEFHP12036 1026 aa3.86□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 APLP2Q06481 763 aa3.86□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 CLSTN1O94985 981 aa3.86□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 GOLGA6L22H0YM25 854 aa3.85□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 ZBTB47Q9UFB7 747 aaPredicted RBP3.85□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 CHMP3Q9Y3E7 222 aa3.85□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 STK11IPQ8N1F8 1099 aa3.85□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 NEUROD1Q13562 356 aa3.85□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 PSMD1Q99460 953 aa3.85□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 SCAF1Q9H7N4 1312 aaKnown RBP3.85□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 TAF3Q5VWG9 929 aa3.85□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 MYO5BQ9ULV0 1848 aa3.84□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 PKNOX2Q96KN3 472 aa3.84□□□□□ -1.79
KCNIP4-IT1-201ENST00000627566 RTN4Q9NQC3 1192 aaKnown RBP3.83□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 RB1CC1Q8TDY2 1594 aa3.83□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 GOLGA6L6A8MZA4 724 aa3.83□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 PLEKHG5O94827 1062 aa3.83□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 MTERF4Q7Z6M4 381 aaKnown RBP3.83□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 KDM5AP29375 1690 aaKnown RBP3.83□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 N4BP2Q86UW6 1770 aaPredicted RBP3.82□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 SETQ01105 290 aaPredicted RBP3.82□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 TAF7LQ5H9L4 462 aa3.82□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 LMOD2Q6P5Q4 547 aa3.82□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 UPF2Q9HAU5 1272 aaKnown RBP3.82□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 TAOK2Q9UL54 1235 aa3.82□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 PBRM1Q86U86 1689 aa3.82□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 GOLGA6L3A6NEY3 463 aa3.82□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 CANXP27824 592 aaKnown RBP3.82□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 BCCIPQ9P287 314 aaKnown RBP eCLIP3.82□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 VSIG10Q8N0Z9 540 aa3.82□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 SSR1P43307 286 aaKnown RBP3.81□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 PATL2C9JE40 543 aaKnown RBP3.81□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 PDIA4P13667 645 aaKnown RBP3.81□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 NAP1L5Q96NT1 182 aaPredicted RBP3.81□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 GOLGA6L1Q8N7Z2 621 aa3.81□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 TOP2BQ02880 1626 aa3.81□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 APPP05067 770 aa3.8□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 SHROOM2Q13796 1616 aa3.8□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 KIAA2012Q0VF49 1180 aa3.8□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 HSP90AA2PQ14568 343 aaPredicted RBP3.8□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 IRX6P78412 446 aaPredicted RBP3.79□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 WWC1Q8IX03 1113 aa3.79□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 MAP7D2Q96T17 732 aa3.79□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 CFAP43Q8NDM7 1665 aa3.79□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 WDR78Q5VTH9 848 aa3.79□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 TRIM26Q12899 539 aaPredicted RBP3.79□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 L1TD1Q5T7N2 865 aaKnown RBP3.79□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 AXDND1Q5T1B0 1012 aaPredicted RBP3.79□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 ADCY10Q96PN6 1610 aa3.78□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 CASZ1Q86V15 1759 aa3.78□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 RSPH6AQ9H0K4 717 aa3.78□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 HSP90AB1P08238 724 aaKnown RBP3.78□□□□□ -1.8
KCNIP4-IT1-201ENST00000627566 LAMC1P11047 1609 aa3.77□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 BRD2P25440 801 aaKnown RBP3.77□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 HMGN5P82970 282 aaKnown RBP3.77□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 CC2D2AQ9P2K1 1620 aa3.77□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 ITGAEP38570 1179 aa3.77□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 WDR43Q15061 677 aaKnown RBP eCLIP3.77□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 PPRC1Q5VV67 1664 aaKnown RBP3.77□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 CROCC2H7BZ55 1655 aa3.77□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 PES1O00541 588 aaKnown RBP3.77□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 FKBP8Q14318 412 aa3.77□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 TSPYL1Q9H0U9 437 aa3.77□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 NRDCO43847 1150 aa3.77□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 SP100P23497 879 aaPredicted RBP3.76□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 GOLGA6L4A6NEF3 574 aa3.76□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 FAM9BQ8IZU0 186 aa3.76□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 NEURL4Q96JN8 1562 aa3.75□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 NPHP1O15259 732 aa3.75□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 PLCB2Q00722 1185 aa3.75□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 IFT172Q9UG01 1749 aa3.75□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 NEUROD2Q15784 382 aa3.75□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 ABCA5Q8WWZ7 1642 aa3.75□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 SETSIPP0DME0 302 aa3.75□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 KIF21BO75037 1637 aa3.74□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 MROH1Q8NDA8 1641 aa3.74□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 USP54Q70EL1 1684 aa3.74□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 NOP58Q9Y2X3 529 aaKnown RBP3.74□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 SETD1AO15047 1707 aaKnown RBP3.74□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 TNNT3P45378 269 aaPredicted RBP3.74□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 PLCD4Q9BRC7 762 aa3.74□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 FBXW7Q969H0 707 aa3.74□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 PRM3Q9NNZ6 103 aa3.74□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 TMEM132AQ24JP5 1023 aa3.74□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.74□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 CHAF1AQ13111 956 aaPredicted RBP3.74□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 PHF14O94880 888 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms