RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 SLC39A7Q92504 469 aa12.86□□□□□ -0.35
VBP1-204ENST00000625964 C7P10643 843 aa12.85□□□□□ -0.35
VBP1-204ENST00000625964 MS4A3Q96HJ5 214 aa12.85□□□□□ -0.35
VBP1-204ENST00000625964 ATMINO43313 823 aaPredicted RBP12.83□□□□□ -0.36
VBP1-204ENST00000625964 METRNQ9UJH8 293 aa12.83□□□□□ -0.36
VBP1-204ENST00000625964 PROM2Q8N271 834 aa12.82□□□□□ -0.36
VBP1-204ENST00000625964 MAMSTRQ6ZN01 415 aa12.8□□□□□ -0.36
VBP1-204ENST00000625964 TSPYL2Q9H2G4 693 aaPredicted RBP12.76□□□□□ -0.37
VBP1-204ENST00000625964 CCDC61Q9Y6R9 512 aa12.75□□□□□ -0.37
VBP1-204ENST00000625964 PLEKHG5O94827 1062 aa12.72□□□□□ -0.37
VBP1-204ENST00000625964 KIF12Q96FN5 646 aa12.7□□□□□ -0.38
VBP1-204ENST00000625964 POTEJP0CG39 1038 aa12.67□□□□□ -0.38
VBP1-204ENST00000625964 ATN1P54259 1190 aaPredicted RBP12.67□□□□□ -0.38
VBP1-204ENST00000625964 SCUBE2Q9NQ36 999 aa12.67□□□□□ -0.38
VBP1-204ENST00000625964 TIE1P35590 1138 aa12.63□□□□□ -0.39
VBP1-204ENST00000625964 MIER1Q8N108 512 aa12.62□□□□□ -0.39
VBP1-204ENST00000625964 BMP2KQ9NSY1 1161 aaPredicted RBP12.61□□□□□ -0.39
VBP1-204ENST00000625964 MAP3K13O43283 966 aa12.58□□□□□ -0.4
VBP1-204ENST00000625964 RASEFQ8IZ41 740 aa12.55□□□□□ -0.4
VBP1-204ENST00000625964 SGIP1Q9BQI5 828 aa12.55□□□□□ -0.4
VBP1-204ENST00000625964 POTEFA5A3E0 1075 aa12.54□□□□□ -0.4
VBP1-204ENST00000625964 FAM163AQ96GL9 167 aaPredicted RBP12.53□□□□□ -0.4
VBP1-204ENST00000625964 TRPC6Q9Y210 931 aa12.52□□□□□ -0.4
VBP1-204ENST00000625964 LCE2DQ5TA82 110 aaPredicted RBP12.5□□□□□ -0.41
VBP1-204ENST00000625964 ZBTB47Q9UFB7 747 aaPredicted RBP12.5□□□□□ -0.41
VBP1-204ENST00000625964 TTLL13PA6NNM8 815 aa12.49□□□□□ -0.41
VBP1-204ENST00000625964 SEC24BO95487 1268 aa12.49□□□□□ -0.41
VBP1-204ENST00000625964 IER5LQ5T953 404 aa12.48□□□□□ -0.41
VBP1-204ENST00000625964 PLCD3Q8N3E9 789 aa12.47□□□□□ -0.41
VBP1-204ENST00000625964 PCDHB13Q9Y5F0 798 aa12.43□□□□□ -0.42
VBP1-204ENST00000625964 COLQQ9Y215 455 aaPredicted RBP12.42□□□□□ -0.42
VBP1-204ENST00000625964 TRIM35Q9UPQ4 493 aa12.42□□□□□ -0.42
VBP1-204ENST00000625964 NUBP1P53384 320 aa12.39□□□□□ -0.43
VBP1-204ENST00000625964 FAM212AQ96EL1 285 aa12.35□□□□□ -0.43
VBP1-204ENST00000625964 IFNL1Q8IU54 200 aa12.32□□□□□ -0.44
VBP1-204ENST00000625964 TMEM106CQ9BVX2 250 aa12.3□□□□□ -0.44
VBP1-204ENST00000625964 PLCG2P16885 1265 aa12.29□□□□□ -0.44
VBP1-204ENST00000625964 SLAIN1Q8ND83 568 aa12.28□□□□□ -0.44
VBP1-204ENST00000625964 CDAN1Q8IWY9 1227 aa12.27□□□□□ -0.44
VBP1-204ENST00000625964 IRX5P78411 483 aaPredicted RBP12.23□□□□□ -0.45
VBP1-204ENST00000625964 ST18O60284 1047 aa12.21□□□□□ -0.45
VBP1-204ENST00000625964 OCEL1Q9H607 264 aa12.19□□□□□ -0.46
VBP1-204ENST00000625964 DCAF8Q5TAQ9 597 aa12.17□□□□□ -0.46
VBP1-204ENST00000625964 SNPHO15079 494 aa12.16□□□□□ -0.46
VBP1-204ENST00000625964 TMEM121BQ9BXQ6 578 aaPredicted RBP12.16□□□□□ -0.46
VBP1-204ENST00000625964 FKBP8Q14318 412 aa12.13□□□□□ -0.47
VBP1-204ENST00000625964 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.12□□□□□ -0.47
VBP1-204ENST00000625964 PYGBP11216 843 aa12.11□□□□□ -0.47
VBP1-204ENST00000625964 FBXO3Q9UK99 471 aa12.11□□□□□ -0.47
VBP1-204ENST00000625964 PCDHB8Q9UN66 801 aa12.06□□□□□ -0.48
VBP1-204ENST00000625964 GSE1Q14687 1217 aa12.04□□□□□ -0.48
VBP1-204ENST00000625964 ZNF467Q7Z7K2 595 aaPredicted RBP12.04□□□□□ -0.48
VBP1-204ENST00000625964 L3MBTL3Q96JM7 780 aaPredicted RBP12.01□□□□□ -0.49
VBP1-204ENST00000625964 MMRN1Q13201 1228 aa12□□□□□ -0.49
VBP1-204ENST00000625964 GOLGA2Q08379 1002 aa11.99□□□□□ -0.49
VBP1-204ENST00000625964 MKRN3Q13064 507 aaKnown RBP11.98□□□□□ -0.49
VBP1-204ENST00000625964 SPNS2Q8IVW8 549 aa11.98□□□□□ -0.49
VBP1-204ENST00000625964 CHRM1P11229 460 aaPredicted RBP11.97□□□□□ -0.49
VBP1-204ENST00000625964 C3orf67Q6ZVT6 689 aa11.97□□□□□ -0.49
VBP1-204ENST00000625964 PDCD7Q8N8D1 485 aaKnown RBP11.97□□□□□ -0.49
VBP1-204ENST00000625964 KLHL34Q8N239 644 aa11.95□□□□□ -0.5
VBP1-204ENST00000625964 MARVELD3Q96A59 401 aa11.92□□□□□ -0.5
VBP1-204ENST00000625964 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.9□□□□□ -0.5
VBP1-204ENST00000625964 VASPP50552 380 aaPredicted RBP11.89□□□□□ -0.51
VBP1-204ENST00000625964 PSEN1P49768 467 aa11.88□□□□□ -0.51
VBP1-204ENST00000625964 EMP3P54852 163 aa11.87□□□□□ -0.51
VBP1-204ENST00000625964 ILDR1Q86SU0 546 aaPredicted RBP11.85□□□□□ -0.51
VBP1-204ENST00000625964 PDAP1Q13442 181 aaKnown RBP11.83□□□□□ -0.52
VBP1-204ENST00000625964 HS3ST6Q96QI5 342 aa11.8□□□□□ -0.52
VBP1-204ENST00000625964 G3V3G9 751 aa11.78□□□□□ -0.52
VBP1-204ENST00000625964 FAM205CA6NFA0 338 aa11.77□□□□□ -0.52
VBP1-204ENST00000625964 KRTAP3-3Q9BYR6 98 aa11.76□□□□□ -0.53
VBP1-204ENST00000625964 KRTAP3-2Q9BYR7 98 aa11.76□□□□□ -0.53
VBP1-204ENST00000625964 BOLA1Q9Y3E2 137 aa11.74□□□□□ -0.53
VBP1-204ENST00000625964 POTEB3A0JP26 581 aa11.73□□□□□ -0.53
VBP1-204ENST00000625964 POTEBQ6S5H4 581 aa11.73□□□□□ -0.53
VBP1-204ENST00000625964 SPOCK2Q92563 424 aa11.72□□□□□ -0.53
VBP1-204ENST00000625964 CABP2Q9NPB3 220 aa11.72□□□□□ -0.53
VBP1-204ENST00000625964 DPY19L2Q6NUT2 758 aa11.71□□□□□ -0.53
VBP1-204ENST00000625964 HOXB3P14651 431 aaPredicted RBP11.68□□□□□ -0.54
VBP1-204ENST00000625964 HOXB1P14653 301 aaPredicted RBP11.68□□□□□ -0.54
VBP1-204ENST00000625964 DOK7Q18PE1 504 aa11.67□□□□□ -0.54
VBP1-204ENST00000625964 ZNF710Q8N1W2 664 aa11.67□□□□□ -0.54
VBP1-204ENST00000625964 CIZ1Q9ULV3 898 aaPredicted RBP11.67□□□□□ -0.54
VBP1-204ENST00000625964 RIMBP2O15034 1052 aa11.62□□□□□ -0.55
VBP1-204ENST00000625964 IFNLR1Q8IU57 520 aaPredicted RBP11.62□□□□□ -0.55
VBP1-204ENST00000625964 TRIM41Q8WV44 630 aa11.62□□□□□ -0.55
VBP1-204ENST00000625964 ERBB3P21860 1342 aa11.6□□□□□ -0.55
VBP1-204ENST00000625964 ZSWIM6Q9HCJ5 1215 aa11.55□□□□□ -0.56
VBP1-204ENST00000625964 EFCAB3Q8N7B9 438 aa11.54□□□□□ -0.56
VBP1-204ENST00000625964 SOX12O15370 315 aa11.5□□□□□ -0.57
VBP1-204ENST00000625964 RNF166Q96A37 237 aaPredicted RBP11.5□□□□□ -0.57
VBP1-204ENST00000625964 VARS2Q5ST30 1063 aaKnown RBP11.49□□□□□ -0.57
VBP1-204ENST00000625964 MICALL2Q8IY33 904 aa11.49□□□□□ -0.57
VBP1-204ENST00000625964 ZNF687Q8N1G0 1237 aa11.48□□□□□ -0.57
VBP1-204ENST00000625964 PTGER2P43116 358 aa11.45□□□□□ -0.58
VBP1-204ENST00000625964 MYT1LQ9UL68 1186 aa11.45□□□□□ -0.58
VBP1-204ENST00000625964 GPR153Q6NV75 609 aa11.43□□□□□ -0.58
VBP1-204ENST00000625964 TMEM92Q6UXU6 159 aa11.42□□□□□ -0.58
VBP1-204ENST00000625964 RIOK3O14730 519 aaKnown RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms