RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 NKX1-1Q15270 411 aaPredicted RBP8.18□□□□□ -1.1
LRRC39-204ENST00000620882 HS6ST3Q8IZP7 471 aa8.16□□□□□ -1.1
LRRC39-204ENST00000620882 HAX1O00165 279 aa8.15□□□□□ -1.1
LRRC39-204ENST00000620882 NUBP1P53384 320 aa8.1□□□□□ -1.11
LRRC39-204ENST00000620882 GTPBP6O43824 516 aaPredicted RBP8.08□□□□□ -1.12
LRRC39-204ENST00000620882 ZBTB47Q9UFB7 747 aaPredicted RBP8.08□□□□□ -1.12
LRRC39-204ENST00000620882 NBR1Q14596 966 aa8.07□□□□□ -1.12
LRRC39-204ENST00000620882 PLEKHG5O94827 1062 aa8.06□□□□□ -1.12
LRRC39-204ENST00000620882 RBM42Q9BTD8 480 aaKnown RBP8.06□□□□□ -1.12
LRRC39-204ENST00000620882 TRIM41Q8WV44 630 aa8.04□□□□□ -1.12
LRRC39-204ENST00000620882 RIOK3O14730 519 aaKnown RBP8.03□□□□□ -1.12
LRRC39-204ENST00000620882 MNX1P50219 401 aaPredicted RBP8.02□□□□□ -1.13
LRRC39-204ENST00000620882 STK25O00506 426 aa8.01□□□□□ -1.13
LRRC39-204ENST00000620882 GSE1Q14687 1217 aa8.01□□□□□ -1.13
LRRC39-204ENST00000620882 TIMELESSQ9UNS1 1208 aa8.01□□□□□ -1.13
LRRC39-204ENST00000620882 DCAF8Q5TAQ9 597 aa8.01□□□□□ -1.13
LRRC39-204ENST00000620882 RASEFQ8IZ41 740 aa7.98□□□□□ -1.13
LRRC39-204ENST00000620882 CREBZFQ9NS37 354 aa7.98□□□□□ -1.13
LRRC39-204ENST00000620882 BCL11BQ9C0K0 894 aaPredicted RBP7.96□□□□□ -1.14
LRRC39-204ENST00000620882 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.95□□□□□ -1.14
LRRC39-204ENST00000620882 ZFP91Q96JP5 570 aaPredicted RBP7.95□□□□□ -1.14
LRRC39-204ENST00000620882 TULP1O00294 542 aaPredicted RBP7.95□□□□□ -1.14
LRRC39-204ENST00000620882 VGFO15240 615 aaPredicted RBP7.93□□□□□ -1.14
LRRC39-204ENST00000620882 PYGBP11216 843 aa7.93□□□□□ -1.14
LRRC39-204ENST00000620882 FAM212AQ96EL1 285 aa7.93□□□□□ -1.14
LRRC39-204ENST00000620882 STK24Q9Y6E0 443 aa7.93□□□□□ -1.14
LRRC39-204ENST00000620882 POTEMA6NI47 508 aa7.92□□□□□ -1.14
LRRC39-204ENST00000620882 EVX2Q03828 476 aa7.92□□□□□ -1.14
LRRC39-204ENST00000620882 CLEC11AQ9Y240 323 aa7.92□□□□□ -1.14
LRRC39-204ENST00000620882 PIP4P2Q8N4L2 257 aa7.91□□□□□ -1.14
LRRC39-204ENST00000620882 PCDH10Q9P2E7 1040 aa7.91□□□□□ -1.14
LRRC39-204ENST00000620882 CADPS2Q86UW7 1296 aa7.9□□□□□ -1.14
LRRC39-204ENST00000620882 SPDYE1Q8NFV5 336 aaPredicted RBP7.88□□□□□ -1.15
LRRC39-204ENST00000620882 CHRM1P11229 460 aaPredicted RBP7.88□□□□□ -1.15
LRRC39-204ENST00000620882 PRR29P0C7W0 189 aa7.87□□□□□ -1.15
LRRC39-204ENST00000620882 GTF3C3Q9Y5Q9 886 aa7.86□□□□□ -1.15
LRRC39-204ENST00000620882 KCNV2Q8TDN2 545 aa7.86□□□□□ -1.15
LRRC39-204ENST00000620882 SGIP1Q9BQI5 828 aa7.86□□□□□ -1.15
LRRC39-204ENST00000620882 POTEGQ6S5H5 508 aa7.84□□□□□ -1.15
LRRC39-204ENST00000620882 REM2Q8IYK8 340 aaPredicted RBP7.84□□□□□ -1.15
LRRC39-204ENST00000620882 AKT1S1Q96B36 256 aa7.82□□□□□ -1.16
LRRC39-204ENST00000620882 PITPNM1O00562 1244 aa7.78□□□□□ -1.16
LRRC39-204ENST00000620882 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.78□□□□□ -1.16
LRRC39-204ENST00000620882 LMOD2Q6P5Q4 547 aa7.77□□□□□ -1.17
LRRC39-204ENST00000620882 PCDHB8Q9UN66 801 aa7.77□□□□□ -1.17
LRRC39-204ENST00000620882 PCDHB13Q9Y5F0 798 aa7.77□□□□□ -1.17
LRRC39-204ENST00000620882 CHADLQ6NUI6 762 aa7.76□□□□□ -1.17
LRRC39-204ENST00000620882 P3H3Q8IVL6 736 aa7.75□□□□□ -1.17
LRRC39-204ENST00000620882 MFRPQ9BY79 579 aa7.75□□□□□ -1.17
LRRC39-204ENST00000620882 TSPYL2Q9H2G4 693 aaPredicted RBP7.75□□□□□ -1.17
LRRC39-204ENST00000620882 TMEM132AQ24JP5 1023 aa7.75□□□□□ -1.17
LRRC39-204ENST00000620882 RYDENQ9NUL5 291 aaKnown RBP7.75□□□□□ -1.17
LRRC39-204ENST00000620882 PPP1R37O75864 691 aa7.73□□□□□ -1.17
LRRC39-204ENST00000620882 BRPF1P55201 1214 aaPredicted RBP7.71□□□□□ -1.17
LRRC39-204ENST00000620882 GABBR2O75899 941 aa7.69□□□□□ -1.18
LRRC39-204ENST00000620882 WDR70Q9NW82 654 aa7.69□□□□□ -1.18
LRRC39-204ENST00000620882 PDAP1Q13442 181 aaKnown RBP7.68□□□□□ -1.18
LRRC39-204ENST00000620882 SEMA3EO15041 775 aa7.68□□□□□ -1.18
LRRC39-204ENST00000620882 ZNF467Q7Z7K2 595 aaPredicted RBP7.68□□□□□ -1.18
LRRC39-204ENST00000620882 CCDC61Q9Y6R9 512 aa7.68□□□□□ -1.18
LRRC39-204ENST00000620882 ZC3H15Q8WU90 426 aaKnown RBP7.66□□□□□ -1.18
LRRC39-204ENST00000620882 PSEN1P49768 467 aa7.66□□□□□ -1.18
LRRC39-204ENST00000620882 FBXO22Q8NEZ5 403 aa7.66□□□□□ -1.18
LRRC39-204ENST00000620882 FXR2P51116 673 aaKnown RBP eCLIP7.65□□□□□ -1.18
LRRC39-204ENST00000620882 FARP1Q9Y4F1 1045 aaPredicted RBP7.64□□□□□ -1.19
LRRC39-204ENST00000620882 IFNL1Q8IU54 200 aa7.63□□□□□ -1.19
LRRC39-204ENST00000620882 EFCAB3Q8N7B9 438 aa7.63□□□□□ -1.19
LRRC39-204ENST00000620882 SLC24A3Q9HC58 644 aa7.63□□□□□ -1.19
LRRC39-204ENST00000620882 PHF8Q9UPP1 1060 aa7.63□□□□□ -1.19
LRRC39-204ENST00000620882 C14orf37Q86TY3 774 aa7.62□□□□□ -1.19
LRRC39-204ENST00000620882 NCKAP5LQ9HCH0 1330 aa7.62□□□□□ -1.19
LRRC39-204ENST00000620882 TESPA1A2RU30 521 aaPredicted RBP7.61□□□□□ -1.19
LRRC39-204ENST00000620882 ARHGEF1Q92888 912 aaKnown RBP7.61□□□□□ -1.19
LRRC39-204ENST00000620882 E2F4Q16254 413 aa7.6□□□□□ -1.19
LRRC39-204ENST00000620882 ZNF579Q8NAF0 562 aaKnown RBP7.6□□□□□ -1.19
LRRC39-204ENST00000620882 CABP2Q9NPB3 220 aa7.6□□□□□ -1.19
LRRC39-204ENST00000620882 MAP3K13O43283 966 aa7.59□□□□□ -1.2
LRRC39-204ENST00000620882 NEUROD2Q15784 382 aa7.59□□□□□ -1.2
LRRC39-204ENST00000620882 ARXQ96QS3 562 aa7.58□□□□□ -1.2
LRRC39-204ENST00000620882 MS4A4AQ96JQ5 239 aa7.57□□□□□ -1.2
LRRC39-204ENST00000620882 PRKAR2AP13861 404 aaKnown RBP7.55□□□□□ -1.2
LRRC39-204ENST00000620882 LARP6Q9BRS8 491 aaKnown RBP7.54□□□□□ -1.2
LRRC39-204ENST00000620882 ZMYND10O75800 440 aa7.53□□□□□ -1.2
LRRC39-204ENST00000620882 NLRP6P59044 892 aa7.53□□□□□ -1.2
LRRC39-204ENST00000620882 KIF12Q96FN5 646 aa7.53□□□□□ -1.2
LRRC39-204ENST00000620882 SUPT5HO00267 1087 aaKnown RBP7.52□□□□□ -1.21
LRRC39-204ENST00000620882 POTEIP0CG38 1075 aa7.51□□□□□ -1.21
LRRC39-204ENST00000620882 CRISPLD2Q9H0B8 497 aa7.51□□□□□ -1.21
LRRC39-204ENST00000620882 GPBP1L1Q9HC44 474 aaPredicted RBP7.51□□□□□ -1.21
LRRC39-204ENST00000620882 ERICH6Q7L0X2 663 aa7.5□□□□□ -1.21
LRRC39-204ENST00000620882 OTUD5Q96G74 571 aa7.5□□□□□ -1.21
LRRC39-204ENST00000620882 SOX12O15370 315 aa7.5□□□□□ -1.21
LRRC39-204ENST00000620882 MLLT3P42568 568 aaPredicted RBP7.5□□□□□ -1.21
LRRC39-204ENST00000620882 MFSD10Q14728 455 aa7.5□□□□□ -1.21
LRRC39-204ENST00000620882 RBM26Q5T8P6 1007 aaKnown RBP7.49□□□□□ -1.21
LRRC39-204ENST00000620882 TRPC6Q9Y210 931 aa7.48□□□□□ -1.21
LRRC39-204ENST00000620882 C19orf67A6NJJ6 358 aa7.46□□□□□ -1.21
LRRC39-204ENST00000620882 DDX27Q96GQ7 796 aaKnown RBP7.46□□□□□ -1.21
LRRC39-204ENST00000620882 BARGINQ6ZT62 677 aa7.46□□□□□ -1.22
LRRC39-204ENST00000620882 PHF12Q96QT6 1004 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms