RNA–Protein interactions for RNA: ENST00000616317.4

ACACA-237, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best) BASIC

Gene ACACA, Length 9,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-237ENST00000616317 NPM1P06748 294 aaKnown RBP eCLIP16.47■□□□□ 0.232e-6■■■■■ 46
ACACA-237ENST00000616317 CHGAP10645 457 aaKnown RBP16.45■□□□□ 0.22
ACACA-237ENST00000616317 MS4A1P11836 297 aa16.45■□□□□ 0.22
ACACA-237ENST00000616317 CFAP53Q96M91 514 aa16.45■□□□□ 0.22
ACACA-237ENST00000616317 EIF4G2P78344 907 aaKnown RBP eCLIP16.42■□□□□ 0.223e-6■■■□□ 17.3
ACACA-237ENST00000616317 PTMSP20962 102 aa16.41■□□□□ 0.22
ACACA-237ENST00000616317 TSPY4P0CV99 314 aa16.4■□□□□ 0.22
ACACA-237ENST00000616317 TSPY10P0CW01 314 aa16.4■□□□□ 0.22
ACACA-237ENST00000616317 NAP1L5Q96NT1 182 aaPredicted RBP16.4■□□□□ 0.22
ACACA-237ENST00000616317 FTSJ3Q8IY81 847 aaKnown RBP16.4■□□□□ 0.22
ACACA-237ENST00000616317 ABCC9O60706 1549 aa16.39■□□□□ 0.21
ACACA-237ENST00000616317 RSF1Q96T23 1441 aaPredicted RBP16.39■□□□□ 0.21
ACACA-237ENST00000616317 MTUS2Q5JR59 1369 aa16.36■□□□□ 0.21
ACACA-237ENST00000616317 P3H3Q8IVL6 736 aa16.36■□□□□ 0.21
ACACA-237ENST00000616317 PNNQ9H307 717 aaKnown RBP16.34■□□□□ 0.21
ACACA-237ENST00000616317 SALL2Q9Y467 1007 aaPredicted RBP16.34■□□□□ 0.21
ACACA-237ENST00000616317 USP35Q9P2H5 1018 aa16.33■□□□□ 0.21
ACACA-237ENST00000616317 MSNP26038 577 aaKnown RBP16.32■□□□□ 0.2
ACACA-237ENST00000616317 EEA1Q15075 1411 aa16.31■□□□□ 0.2
ACACA-237ENST00000616317 SCRIBQ14160 1630 aa16.29■□□□□ 0.2
ACACA-237ENST00000616317 KNSTRNQ9Y448 316 aa16.28■□□□□ 0.2
ACACA-237ENST00000616317 PABPN1Q86U42 306 aaKnown RBP eCLIP16.28■□□□□ 0.24e-6■□□□□ 10.2
ACACA-237ENST00000616317 NOP58Q9Y2X3 529 aaKnown RBP16.27■□□□□ 0.2
ACACA-237ENST00000616317 HSP90AB1P08238 724 aaKnown RBP16.27■□□□□ 0.2
ACACA-237ENST00000616317 GOLGA6L4A6NEF3 574 aa16.26■□□□□ 0.19
ACACA-237ENST00000616317 MCCP23508 829 aa16.26■□□□□ 0.19
ACACA-237ENST00000616317 KIAA2012Q0VF49 1180 aa16.25■□□□□ 0.19
ACACA-237ENST00000616317 ARID3CA6NKF2 412 aa16.25■□□□□ 0.19
ACACA-237ENST00000616317 PPP4R2Q9NY27 417 aa16.24■□□□□ 0.19
ACACA-237ENST00000616317 HAP1P54257 671 aaPredicted RBP16.24■□□□□ 0.19
ACACA-237ENST00000616317 FGD1P98174 961 aa16.24■□□□□ 0.19
ACACA-237ENST00000616317 HSCBQ8IWL3 235 aa16.24■□□□□ 0.19
ACACA-237ENST00000616317 NUDCQ9Y266 331 aa16.24■□□□□ 0.19
ACACA-237ENST00000616317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.23■□□□□ 0.198e-12■■□□□ 14.2
ACACA-237ENST00000616317 MAPK8IP3Q9UPT6 1336 aa16.22■□□□□ 0.19
ACACA-237ENST00000616317 CLIP1P30622 1438 aa16.21■□□□□ 0.19
ACACA-237ENST00000616317 PPP1R15AO75807 674 aaPredicted RBP16.2■□□□□ 0.18
ACACA-237ENST00000616317 SCAF1Q9H7N4 1312 aaKnown RBP16.2■□□□□ 0.18
ACACA-237ENST00000616317 KDM2AQ9Y2K7 1162 aa16.18■□□□□ 0.18
ACACA-237ENST00000616317 ARID4BQ4LE39 1312 aaPredicted RBP16.18■□□□□ 0.18
ACACA-237ENST00000616317 HTATSF1O43719 755 aaKnown RBP16.17■□□□□ 0.18
ACACA-237ENST00000616317 KCNJ4P48050 445 aa16.17■□□□□ 0.18
ACACA-237ENST00000616317 SYAP1Q96A49 352 aaPredicted RBP16.17■□□□□ 0.18
ACACA-237ENST00000616317 GOLGA3Q08378 1498 aa16.16■□□□□ 0.18
ACACA-237ENST00000616317 CCDC34Q96HJ3 373 aa16.15■□□□□ 0.18
ACACA-237ENST00000616317 MIER1Q8N108 512 aa16.14■□□□□ 0.17
ACACA-237ENST00000616317 PLCB2Q00722 1185 aa16.14■□□□□ 0.17
ACACA-237ENST00000616317 DRC7Q8IY82 874 aa16.14■□□□□ 0.17
ACACA-237ENST00000616317 GBP4Q96PP9 640 aa16.13■□□□□ 0.17
ACACA-237ENST00000616317 GOLGA2Q08379 1002 aa16.13■□□□□ 0.17
ACACA-237ENST00000616317 A0A0G2JS52 829 aa16.12■□□□□ 0.17
ACACA-237ENST00000616317 OS9Q13438 667 aaPredicted RBP16.12■□□□□ 0.17
ACACA-237ENST00000616317 GOLGA6L1Q8N7Z2 621 aa16.11■□□□□ 0.17
ACACA-237ENST00000616317 IRX6P78412 446 aaPredicted RBP16.11■□□□□ 0.17
ACACA-237ENST00000616317 C14orf37Q86TY3 774 aa16.11■□□□□ 0.17
ACACA-237ENST00000616317 CHIC2Q9UKJ5 165 aa16.11■□□□□ 0.17
ACACA-237ENST00000616317 CHMP4AQ9BY43 222 aa16.11■□□□□ 0.17
ACACA-237ENST00000616317 TPM4P67936 248 aa16.09■□□□□ 0.17
ACACA-237ENST00000616317 NOC3LQ8WTT2 800 aaKnown RBP16.09■□□□□ 0.17
ACACA-237ENST00000616317 TNNT3P45378 269 aaPredicted RBP16.06■□□□□ 0.16
ACACA-237ENST00000616317 CSPP1Q1MSJ5 1256 aa16.06■□□□□ 0.16
ACACA-237ENST00000616317 GNL2Q13823 731 aaKnown RBP16.05■□□□□ 0.16
ACACA-237ENST00000616317 SUPT16HQ9Y5B9 1047 aaKnown RBP16.04■□□□□ 0.16
ACACA-237ENST00000616317 NPHP1O15259 732 aa16.04■□□□□ 0.16
ACACA-237ENST00000616317 PHF14O94880 888 aa16.04■□□□□ 0.16
ACACA-237ENST00000616317 CALD1Q05682 793 aaKnown RBP16.03■□□□□ 0.16
ACACA-237ENST00000616317 ZCCHC6Q5VYS8 1495 aaKnown RBP16.03■□□□□ 0.16
ACACA-237ENST00000616317 KIAA1211Q6ZU35 1233 aa16.03■□□□□ 0.16
ACACA-237ENST00000616317 LAS1LQ9Y4W2 734 aaKnown RBP16.03■□□□□ 0.16
ACACA-237ENST00000616317 IPO8O15397 1037 aaKnown RBP16.01■□□□□ 0.15
ACACA-237ENST00000616317 CARD11Q9BXL7 1154 aa16■□□□□ 0.15
ACACA-237ENST00000616317 RGS3P49796 1198 aa16■□□□□ 0.15
ACACA-237ENST00000616317 SETQ01105 290 aaPredicted RBP16■□□□□ 0.15
ACACA-237ENST00000616317 PLEKHD1A6NEE1 506 aa16■□□□□ 0.15
ACACA-237ENST00000616317 TULP1O00294 542 aaPredicted RBP16■□□□□ 0.15
ACACA-237ENST00000616317 TIMELESSQ9UNS1 1208 aa16■□□□□ 0.15
ACACA-237ENST00000616317 NAP1L2Q9ULW6 460 aaPredicted RBP15.99■□□□□ 0.15
ACACA-237ENST00000616317 CHMP7Q8WUX9 453 aaPredicted RBP15.99■□□□□ 0.15
ACACA-237ENST00000616317 HDAC5Q9UQL6 1122 aa15.99■□□□□ 0.15
ACACA-237ENST00000616317 CEP164Q9UPV0 1460 aa15.99■□□□□ 0.15
ACACA-237ENST00000616317 ZBTB7CA1YPR0 619 aa15.98■□□□□ 0.15
ACACA-237ENST00000616317 KANK1Q14678 1352 aa15.98■□□□□ 0.15
ACACA-237ENST00000616317 FHAD1B1AJZ9 1412 aa15.98■□□□□ 0.15
ACACA-237ENST00000616317 PLPPR3Q6T4P5 718 aa15.97■□□□□ 0.15
ACACA-237ENST00000616317 CEP162Q5TB80 1403 aa15.96■□□□□ 0.15
ACACA-237ENST00000616317 CLSTN1O94985 981 aa15.95■□□□□ 0.14
ACACA-237ENST00000616317 RB1CC1Q8TDY2 1594 aa15.95■□□□□ 0.14
ACACA-237ENST00000616317 HDGFP51858 240 aaKnown RBP15.95■□□□□ 0.14
ACACA-237ENST00000616317 CCER2I3L3R5 266 aa15.95■□□□□ 0.14
ACACA-237ENST00000616317 FRAT1Q92837 279 aaPredicted RBP15.95■□□□□ 0.14
ACACA-237ENST00000616317 TPRNQ4KMQ1 711 aa15.94■□□□□ 0.14
ACACA-237ENST00000616317 GPATCH3Q96I76 525 aa15.94■□□□□ 0.14
ACACA-237ENST00000616317 CHMP4CQ96CF2 233 aa15.93■□□□□ 0.14
ACACA-237ENST00000616317 DEKP35659 375 aaKnown RBP15.93■□□□□ 0.14
ACACA-237ENST00000616317 TMF1P82094 1093 aa15.93■□□□□ 0.14
ACACA-237ENST00000616317 POGKQ9P215 609 aa15.93■□□□□ 0.14
ACACA-237ENST00000616317 RRP7BPQ9NSQ0 103 aa15.92■□□□□ 0.14
ACACA-237ENST00000616317 A0A0U1RQG5 324 aaPredicted RBP15.92■□□□□ 0.14
ACACA-237ENST00000616317 KIF27Q86VH2 1401 aa15.91■□□□□ 0.14
ACACA-237ENST00000616317 KIF3AQ9Y496 699 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms