RNA–Protein interactions for RNA: ENST00000616317.4

ACACA-237, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best) BASIC

Gene ACACA, Length 9,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-237ENST00000616317 PELP1Q8IZL8 1130 aaKnown RBP20.85■□□□□ 0.93
ACACA-237ENST00000616317 DCAF8L2P0C7V8 631 aa20.55■□□□□ 0.88
ACACA-237ENST00000616317 CCER1Q8TC90 406 aaPredicted RBP19.82■□□□□ 0.76
ACACA-237ENST00000616317 MYT1Q01538 1121 aa19.81■□□□□ 0.76
ACACA-237ENST00000616317 APLP2Q06481 763 aa19.67■□□□□ 0.74
ACACA-237ENST00000616317 SUPT5HO00267 1087 aaKnown RBP19.67■□□□□ 0.74
ACACA-237ENST00000616317 FAM9AQ8IZU1 332 aaPredicted RBP19.62■□□□□ 0.73
ACACA-237ENST00000616317 ERICH6Q7L0X2 663 aa19.61■□□□□ 0.73
ACACA-237ENST00000616317 CENPBP07199 599 aaPredicted RBP19.5■□□□□ 0.71
ACACA-237ENST00000616317 NISCHQ9Y2I1 1504 aa19.38■□□□□ 0.69
ACACA-237ENST00000616317 ZEB1P37275 1124 aaPredicted RBP19.36■□□□□ 0.69
ACACA-237ENST00000616317 NEFLP07196 543 aa19.13■□□□□ 0.65
ACACA-237ENST00000616317 YTHDC1Q96MU7 727 aaKnown RBP19.08■□□□□ 0.65
ACACA-237ENST00000616317 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
ACACA-237ENST00000616317 EHMT2Q96KQ7 1210 aa18.91■□□□□ 0.62
ACACA-237ENST00000616317 PCGF6Q9BYE7 350 aa18.81■□□□□ 0.6
ACACA-237ENST00000616317 DAXXQ9UER7 740 aaPredicted RBP18.79■□□□□ 0.6
ACACA-237ENST00000616317 TRIM41Q8WV44 630 aa18.48■□□□□ 0.55
ACACA-237ENST00000616317 TTBK1Q5TCY1 1321 aaPredicted RBP18.46■□□□□ 0.55
ACACA-237ENST00000616317 ATP1B4Q9UN42 357 aaPredicted RBP18.38■□□□□ 0.53
ACACA-237ENST00000616317 UBTFP17480 764 aaKnown RBP18.38■□□□□ 0.53
ACACA-237ENST00000616317 RTL5Q5HYW3 569 aaPredicted RBP18.33■□□□□ 0.52
ACACA-237ENST00000616317 ZNF316A6NFI3 1004 aaPredicted RBP18.26■□□□□ 0.51
ACACA-237ENST00000616317 TRIM26Q12899 539 aaPredicted RBP18.21■□□□□ 0.51
ACACA-237ENST00000616317 RANGAP1P46060 587 aaPredicted RBP18.2■□□□□ 0.5
ACACA-237ENST00000616317 CLSPNQ9HAW4 1339 aa18.01■□□□□ 0.47
ACACA-237ENST00000616317 HRCP23327 699 aa17.97■□□□□ 0.47
ACACA-237ENST00000616317 POLR3GLQ9BT43 218 aa17.86■□□□□ 0.45
ACACA-237ENST00000616317 MYT1LQ9UL68 1186 aa17.85■□□□□ 0.45
ACACA-237ENST00000616317 ZBTB47Q9UFB7 747 aaPredicted RBP17.82■□□□□ 0.44
ACACA-237ENST00000616317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
ACACA-237ENST00000616317 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
ACACA-237ENST00000616317 CDK11AQ9UQ88 783 aaPredicted RBP17.71■□□□□ 0.43
ACACA-237ENST00000616317 DIEXFQ68CQ4 756 aaKnown RBP17.7■□□□□ 0.42
ACACA-237ENST00000616317 SLC4A1APQ9BWU0 796 aaKnown RBP17.68■□□□□ 0.42
ACACA-237ENST00000616317 GLIPR1L2Q4G1C9 344 aa17.65■□□□□ 0.42
ACACA-237ENST00000616317 ITGAEP38570 1179 aa17.64■□□□□ 0.41
ACACA-237ENST00000616317 ANP32BQ92688 251 aaKnown RBP17.63■□□□□ 0.41
ACACA-237ENST00000616317 ANP32AP39687 249 aaKnown RBP17.56■□□□□ 0.4
ACACA-237ENST00000616317 ANP32CO43423 234 aa17.55■□□□□ 0.4
ACACA-237ENST00000616317 NEFMP07197 916 aa17.55■□□□□ 0.4
ACACA-237ENST00000616317 PPARGC1BQ86YN6 1023 aaKnown RBP17.52■□□□□ 0.4
ACACA-237ENST00000616317 CANXP27824 592 aaKnown RBP17.47■□□□□ 0.39
ACACA-237ENST00000616317 CNGB1Q14028 1251 aaPredicted RBP17.38■□□□□ 0.37
ACACA-237ENST00000616317 UPF2Q9HAU5 1272 aaKnown RBP17.35■□□□□ 0.37
ACACA-237ENST00000616317 FAM50AQ14320 339 aaKnown RBP17.34■□□□□ 0.37
ACACA-237ENST00000616317 TRIM52Q96A61 297 aa17.32■□□□□ 0.36
ACACA-237ENST00000616317 GTF3C3Q9Y5Q9 886 aa17.3■□□□□ 0.36
ACACA-237ENST00000616317 HSP90AA1P07900 732 aaKnown RBP17.28■□□□□ 0.36
ACACA-237ENST00000616317 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
ACACA-237ENST00000616317 EIF5BO60841 1220 aaKnown RBP17.18■□□□□ 0.34
ACACA-237ENST00000616317 BCANQ96GW7 911 aa17.17■□□□□ 0.34
ACACA-237ENST00000616317 NEUROD1Q13562 356 aa17.16■□□□□ 0.34
ACACA-237ENST00000616317 LOC105371045A0A1W2PR82 267 aa17.14■□□□□ 0.33
ACACA-237ENST00000616317 SLC24A1O60721 1099 aa17.12■□□□□ 0.33
ACACA-237ENST00000616317 ANP32EQ9BTT0 268 aa17.11■□□□□ 0.33
ACACA-237ENST00000616317 ACIN1Q9UKV3 1341 aaKnown RBP17.08■□□□□ 0.32
ACACA-237ENST00000616317 ZNF326Q5BKZ1 582 aaKnown RBP17.08■□□□□ 0.32
ACACA-237ENST00000616317 CDK11BP21127 795 aaKnown RBP17.07■□□□□ 0.32
ACACA-237ENST00000616317 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.05■□□□□ 0.32
ACACA-237ENST00000616317 TNNT2P45379 298 aaPredicted RBP17.04■□□□□ 0.32
ACACA-237ENST00000616317 NPM2Q86SE8 214 aaKnown RBP16.99■□□□□ 0.31
ACACA-237ENST00000616317 TONSLQ96HA7 1378 aa16.92■□□□□ 0.3
ACACA-237ENST00000616317 DDRGK1Q96HY6 314 aa16.9■□□□□ 0.3
ACACA-237ENST00000616317 BECN1Q14457 450 aa16.9■□□□□ 0.3
ACACA-237ENST00000616317 BCL11AQ9H165 835 aa16.9■□□□□ 0.3
ACACA-237ENST00000616317 MYH16Q9H6N6 1097 aa16.89■□□□□ 0.29
ACACA-237ENST00000616317 GOLGA6L22H0YM25 854 aa16.86■□□□□ 0.29
ACACA-237ENST00000616317 TRIM44Q96DX7 344 aaPredicted RBP16.85■□□□□ 0.29
ACACA-237ENST00000616317 NCLP19338 710 aaKnown RBP16.85■□□□□ 0.29
ACACA-237ENST00000616317 CCDC136Q96JN2 1154 aa16.84■□□□□ 0.29
ACACA-237ENST00000616317 ESF1Q9H501 851 aaKnown RBP16.83■□□□□ 0.28
ACACA-237ENST00000616317 FKBP8Q14318 412 aa16.82■□□□□ 0.28
ACACA-237ENST00000616317 HNRNPUQ00839 825 aaKnown RBP eCLIP16.77■□□□□ 0.28
ACACA-237ENST00000616317 DCAF1Q9Y4B6 1507 aa16.76■□□□□ 0.27
ACACA-237ENST00000616317 WDR43Q15061 677 aaKnown RBP eCLIP16.74■□□□□ 0.271e-5■■■■□ 24.6
ACACA-237ENST00000616317 ZRSR1Q15695 479 aaKnown RBP16.74■□□□□ 0.27
ACACA-237ENST00000616317 TMC1Q8TDI8 760 aa16.74■□□□□ 0.27
ACACA-237ENST00000616317 ERICH6BQ5W0A0 696 aa16.72■□□□□ 0.27
ACACA-237ENST00000616317 CASC1Q6TDU7 716 aa16.69■□□□□ 0.26
ACACA-237ENST00000616317 NBR1Q14596 966 aa16.68■□□□□ 0.26
ACACA-237ENST00000616317 STAG3Q9UJ98 1225 aa16.68■□□□□ 0.26
ACACA-237ENST00000616317 GOLGA6L6A8MZA4 724 aa16.67■□□□□ 0.26
ACACA-237ENST00000616317 NRDCO43847 1150 aa16.64■□□□□ 0.25
ACACA-237ENST00000616317 PTMAP06454 111 aaKnown RBP16.61■□□□□ 0.25
ACACA-237ENST00000616317 FBLN2P98095 1184 aa16.61■□□□□ 0.25
ACACA-237ENST00000616317 FAM9BQ8IZU0 186 aa16.6■□□□□ 0.25
ACACA-237ENST00000616317 PPM1GO15355 546 aaPredicted RBP16.6■□□□□ 0.25
ACACA-237ENST00000616317 CHMP4BQ9H444 224 aaKnown RBP16.58■□□□□ 0.24
ACACA-237ENST00000616317 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.24
ACACA-237ENST00000616317 DNTTIP2Q5QJE6 756 aaKnown RBP16.55■□□□□ 0.24
ACACA-237ENST00000616317 ZNF777Q9ULD5 760 aaPredicted RBP16.55■□□□□ 0.24
ACACA-237ENST00000616317 L1TD1Q5T7N2 865 aaKnown RBP16.55■□□□□ 0.24
ACACA-237ENST00000616317 MRS2Q9HD23 443 aa16.53■□□□□ 0.24
ACACA-237ENST00000616317 CHAF1AQ13111 956 aaPredicted RBP16.53■□□□□ 0.24
ACACA-237ENST00000616317 ARXQ96QS3 562 aa16.52■□□□□ 0.24
ACACA-237ENST00000616317 CDCA8Q53HL2 280 aa16.5■□□□□ 0.23
ACACA-237ENST00000616317 CCDC180Q9P1Z9 1646 aa16.49■□□□□ 0.23
ACACA-237ENST00000616317 DDX10Q13206 875 aaKnown RBP16.49■□□□□ 0.23
ACACA-237ENST00000616317 CFAP44Q96MT7 982 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms