RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 SLC39A7Q92504 469 aa11.2□□□□□ -0.62
HMGB1P24-202ENST00000615653 ATMINO43313 823 aaPredicted RBP11.16□□□□□ -0.62
HMGB1P24-202ENST00000615653 FAM163AQ96GL9 167 aaPredicted RBP11.14□□□□□ -0.63
HMGB1P24-202ENST00000615653 MS4A3Q96HJ5 214 aa11.12□□□□□ -0.63
HMGB1P24-202ENST00000615653 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
HMGB1P24-202ENST00000615653 MNX1P50219 401 aaPredicted RBP11.1□□□□□ -0.63
HMGB1P24-202ENST00000615653 SCUBE2Q9NQ36 999 aa11.09□□□□□ -0.63
HMGB1P24-202ENST00000615653 ATN1P54259 1190 aaPredicted RBP11□□□□□ -0.65
HMGB1P24-202ENST00000615653 POTEFA5A3E0 1075 aa10.98□□□□□ -0.65
HMGB1P24-202ENST00000615653 CDAN1Q8IWY9 1227 aa10.97□□□□□ -0.65
HMGB1P24-202ENST00000615653 SPDYE4A6NLX3 237 aa10.91□□□□□ -0.66
HMGB1P24-202ENST00000615653 BMP2KQ9NSY1 1161 aaPredicted RBP10.9□□□□□ -0.66
HMGB1P24-202ENST00000615653 CCDC61Q9Y6R9 512 aa10.89□□□□□ -0.67
HMGB1P24-202ENST00000615653 KIF12Q96FN5 646 aa10.87□□□□□ -0.67
HMGB1P24-202ENST00000615653 TSPYL2Q9H2G4 693 aaPredicted RBP10.87□□□□□ -0.67
HMGB1P24-202ENST00000615653 TIE1P35590 1138 aa10.84□□□□□ -0.67
HMGB1P24-202ENST00000615653 TRPC6Q9Y210 931 aa10.83□□□□□ -0.68
HMGB1P24-202ENST00000615653 COLQQ9Y215 455 aaPredicted RBP10.82□□□□□ -0.68
HMGB1P24-202ENST00000615653 ST18O60284 1047 aa10.77□□□□□ -0.69
HMGB1P24-202ENST00000615653 SEC24BO95487 1268 aa10.77□□□□□ -0.69
HMGB1P24-202ENST00000615653 MMRN1Q13201 1228 aa10.76□□□□□ -0.69
HMGB1P24-202ENST00000615653 MAP3K13O43283 966 aa10.75□□□□□ -0.69
HMGB1P24-202ENST00000615653 TTLL13PA6NNM8 815 aa10.74□□□□□ -0.69
HMGB1P24-202ENST00000615653 IER5LQ5T953 404 aa10.73□□□□□ -0.69
HMGB1P24-202ENST00000615653 SPNS2Q8IVW8 549 aa10.73□□□□□ -0.69
HMGB1P24-202ENST00000615653 SLAIN1Q8ND83 568 aa10.71□□□□□ -0.69
HMGB1P24-202ENST00000615653 TRIM35Q9UPQ4 493 aa10.66□□□□□ -0.7
HMGB1P24-202ENST00000615653 CSRNP3Q8WYN3 585 aa10.65□□□□□ -0.7
HMGB1P24-202ENST00000615653 TMEM121BQ9BXQ6 578 aaPredicted RBP10.63□□□□□ -0.71
HMGB1P24-202ENST00000615653 SGIP1Q9BQI5 828 aa10.62□□□□□ -0.71
HMGB1P24-202ENST00000615653 RASEFQ8IZ41 740 aa10.61□□□□□ -0.71
HMGB1P24-202ENST00000615653 PROM2Q8N271 834 aa10.6□□□□□ -0.71
HMGB1P24-202ENST00000615653 PCDHB13Q9Y5F0 798 aa10.54□□□□□ -0.72
HMGB1P24-202ENST00000615653 SNPHO15079 494 aa10.53□□□□□ -0.72
HMGB1P24-202ENST00000615653 PLCG2P16885 1265 aa10.53□□□□□ -0.72
HMGB1P24-202ENST00000615653 PLEKHG5O94827 1062 aa10.51□□□□□ -0.73
HMGB1P24-202ENST00000615653 IRX5P78411 483 aaPredicted RBP10.51□□□□□ -0.73
HMGB1P24-202ENST00000615653 MARVELD3Q96A59 401 aa10.49□□□□□ -0.73
HMGB1P24-202ENST00000615653 TMEM106CQ9BVX2 250 aa10.48□□□□□ -0.73
HMGB1P24-202ENST00000615653 IFNL1Q8IU54 200 aa10.47□□□□□ -0.73
HMGB1P24-202ENST00000615653 MIER1Q8N108 512 aa10.47□□□□□ -0.73
HMGB1P24-202ENST00000615653 OCEL1Q9H607 264 aa10.44□□□□□ -0.74
HMGB1P24-202ENST00000615653 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.43□□□□□ -0.74
HMGB1P24-202ENST00000615653 KRTAP3-3Q9BYR6 98 aa10.41□□□□□ -0.74
HMGB1P24-202ENST00000615653 KRTAP3-2Q9BYR7 98 aa10.41□□□□□ -0.74
HMGB1P24-202ENST00000615653 NUBP1P53384 320 aa10.38□□□□□ -0.75
HMGB1P24-202ENST00000615653 POTEB3A0JP26 581 aa10.36□□□□□ -0.75
HMGB1P24-202ENST00000615653 EMP3P54852 163 aa10.36□□□□□ -0.75
HMGB1P24-202ENST00000615653 POTEBQ6S5H4 581 aa10.36□□□□□ -0.75
HMGB1P24-202ENST00000615653 HS3ST6Q96QI5 342 aa10.34□□□□□ -0.75
HMGB1P24-202ENST00000615653 FAM205CA6NFA0 338 aa10.3□□□□□ -0.76
HMGB1P24-202ENST00000615653 PLCD3Q8N3E9 789 aa10.3□□□□□ -0.76
HMGB1P24-202ENST00000615653 ZBTB47Q9UFB7 747 aaPredicted RBP10.3□□□□□ -0.76
HMGB1P24-202ENST00000615653 FAM212AQ96EL1 285 aa10.28□□□□□ -0.76
HMGB1P24-202ENST00000615653 C3orf67Q6ZVT6 689 aa10.24□□□□□ -0.77
HMGB1P24-202ENST00000615653 PDCD7Q8N8D1 485 aaKnown RBP10.24□□□□□ -0.77
HMGB1P24-202ENST00000615653 L3MBTL3Q96JM7 780 aaPredicted RBP10.22□□□□□ -0.77
HMGB1P24-202ENST00000615653 PCDHB8Q9UN66 801 aa10.16□□□□□ -0.78
HMGB1P24-202ENST00000615653 PYGBP11216 843 aa10.15□□□□□ -0.78
HMGB1P24-202ENST00000615653 RNF166Q96A37 237 aaPredicted RBP10.15□□□□□ -0.78
HMGB1P24-202ENST00000615653 DCAF8Q5TAQ9 597 aa10.11□□□□□ -0.79
HMGB1P24-202ENST00000615653 HOXB3P14651 431 aaPredicted RBP10.1□□□□□ -0.79
HMGB1P24-202ENST00000615653 MKRN3Q13064 507 aaKnown RBP10.1□□□□□ -0.79
HMGB1P24-202ENST00000615653 HOXB1P14653 301 aaPredicted RBP10.09□□□□□ -0.79
HMGB1P24-202ENST00000615653 EHMT2Q96KQ7 1210 aa10.07□□□□□ -0.8
HMGB1P24-202ENST00000615653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.07□□□□□ -0.8
HMGB1P24-202ENST00000615653 GOLGA2Q08379 1002 aa10.06□□□□□ -0.8
HMGB1P24-202ENST00000615653 ILDR1Q86SU0 546 aaPredicted RBP10.06□□□□□ -0.8
HMGB1P24-202ENST00000615653 MYT1LQ9UL68 1186 aa10.05□□□□□ -0.8
HMGB1P24-202ENST00000615653 ERBB3P21860 1342 aa10.04□□□□□ -0.8
HMGB1P24-202ENST00000615653 ZNF467Q7Z7K2 595 aaPredicted RBP10.02□□□□□ -0.81
HMGB1P24-202ENST00000615653 ZNF710Q8N1W2 664 aa10□□□□□ -0.81
HMGB1P24-202ENST00000615653 DPY19L2Q6NUT2 758 aa9.99□□□□□ -0.81
HMGB1P24-202ENST00000615653 DOK7Q18PE1 504 aa9.98□□□□□ -0.81
HMGB1P24-202ENST00000615653 PTGER2P43116 358 aa9.95□□□□□ -0.82
HMGB1P24-202ENST00000615653 PSEN1P49768 467 aa9.95□□□□□ -0.82
HMGB1P24-202ENST00000615653 VARS2Q5ST30 1063 aaKnown RBP9.95□□□□□ -0.82
HMGB1P24-202ENST00000615653 BOLA1Q9Y3E2 137 aa9.95□□□□□ -0.82
HMGB1P24-202ENST00000615653 ZNF687Q8N1G0 1237 aa9.94□□□□□ -0.82
HMGB1P24-202ENST00000615653 CHRM1P11229 460 aaPredicted RBP9.93□□□□□ -0.82
HMGB1P24-202ENST00000615653 G3V3G9 751 aa9.92□□□□□ -0.82
HMGB1P24-202ENST00000615653 RIMBP2O15034 1052 aa9.9□□□□□ -0.82
HMGB1P24-202ENST00000615653 GSE1Q14687 1217 aa9.9□□□□□ -0.82
HMGB1P24-202ENST00000615653 ZSWIM6Q9HCJ5 1215 aa9.86□□□□□ -0.83
HMGB1P24-202ENST00000615653 PDAP1Q13442 181 aaKnown RBP9.84□□□□□ -0.83
HMGB1P24-202ENST00000615653 CABP2Q9NPB3 220 aa9.82□□□□□ -0.84
HMGB1P24-202ENST00000615653 GPR153Q6NV75 609 aa9.81□□□□□ -0.84
HMGB1P24-202ENST00000615653 ANKRD13DQ6ZTN6 518 aa9.78□□□□□ -0.84
HMGB1P24-202ENST00000615653 TMEM92Q6UXU6 159 aa9.75□□□□□ -0.85
HMGB1P24-202ENST00000615653 PLA2G2EQ9NZK7 142 aa9.75□□□□□ -0.85
HMGB1P24-202ENST00000615653 LSM11P83369 360 aaKnown RBP eCLIP9.73□□□□□ -0.85
HMGB1P24-202ENST00000615653 KLHL34Q8N239 644 aa9.7□□□□□ -0.86
HMGB1P24-202ENST00000615653 FBXO3Q9UK99 471 aa9.7□□□□□ -0.86
HMGB1P24-202ENST00000615653 ZNF316A6NFI3 1004 aaPredicted RBP9.69□□□□□ -0.86
HMGB1P24-202ENST00000615653 MICALL2Q8IY33 904 aa9.68□□□□□ -0.86
HMGB1P24-202ENST00000615653 FKBP8Q14318 412 aa9.67□□□□□ -0.86
HMGB1P24-202ENST00000615653 ARSIQ5FYB1 569 aa9.67□□□□□ -0.86
HMGB1P24-202ENST00000615653 HCSTQ9UBK5 93 aa9.67□□□□□ -0.86
HMGB1P24-202ENST00000615653 EFCAB3Q8N7B9 438 aa9.64□□□□□ -0.87
HMGB1P24-202ENST00000615653 PBX2P40425 430 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms