RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 SLC39A7Q92504 469 aa11.2□□□□□ -0.62
HMGB1P24-202ENST00000615653 ATMINO43313 823 aaPredicted RBP11.16□□□□□ -0.62
HMGB1P24-202ENST00000615653 FAM163AQ96GL9 167 aaPredicted RBP11.14□□□□□ -0.63
HMGB1P24-202ENST00000615653 MS4A3Q96HJ5 214 aa11.12□□□□□ -0.63
HMGB1P24-202ENST00000615653 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
HMGB1P24-202ENST00000615653 MNX1P50219 401 aaPredicted RBP11.1□□□□□ -0.63
HMGB1P24-202ENST00000615653 SCUBE2Q9NQ36 999 aa11.09□□□□□ -0.63
HMGB1P24-202ENST00000615653 ATN1P54259 1190 aaPredicted RBP11□□□□□ -0.65
HMGB1P24-202ENST00000615653 POTEFA5A3E0 1075 aa10.98□□□□□ -0.65
HMGB1P24-202ENST00000615653 CDAN1Q8IWY9 1227 aa10.97□□□□□ -0.65
HMGB1P24-202ENST00000615653 SPDYE4A6NLX3 237 aa10.91□□□□□ -0.66
HMGB1P24-202ENST00000615653 BMP2KQ9NSY1 1161 aaPredicted RBP10.9□□□□□ -0.66
HMGB1P24-202ENST00000615653 CCDC61Q9Y6R9 512 aa10.89□□□□□ -0.67
HMGB1P24-202ENST00000615653 KIF12Q96FN5 646 aa10.87□□□□□ -0.67
HMGB1P24-202ENST00000615653 TSPYL2Q9H2G4 693 aaPredicted RBP10.87□□□□□ -0.67
HMGB1P24-202ENST00000615653 TIE1P35590 1138 aa10.84□□□□□ -0.67
HMGB1P24-202ENST00000615653 TRPC6Q9Y210 931 aa10.83□□□□□ -0.68
HMGB1P24-202ENST00000615653 COLQQ9Y215 455 aaPredicted RBP10.82□□□□□ -0.68
HMGB1P24-202ENST00000615653 ST18O60284 1047 aa10.77□□□□□ -0.69
HMGB1P24-202ENST00000615653 SEC24BO95487 1268 aa10.77□□□□□ -0.69
HMGB1P24-202ENST00000615653 MMRN1Q13201 1228 aa10.76□□□□□ -0.69
HMGB1P24-202ENST00000615653 MAP3K13O43283 966 aa10.75□□□□□ -0.69
HMGB1P24-202ENST00000615653 TTLL13PA6NNM8 815 aa10.74□□□□□ -0.69
HMGB1P24-202ENST00000615653 IER5LQ5T953 404 aa10.73□□□□□ -0.69
HMGB1P24-202ENST00000615653 SPNS2Q8IVW8 549 aa10.73□□□□□ -0.69
HMGB1P24-202ENST00000615653 SLAIN1Q8ND83 568 aa10.71□□□□□ -0.69
HMGB1P24-202ENST00000615653 TRIM35Q9UPQ4 493 aa10.66□□□□□ -0.7
HMGB1P24-202ENST00000615653 CSRNP3Q8WYN3 585 aa10.65□□□□□ -0.7
HMGB1P24-202ENST00000615653 TMEM121BQ9BXQ6 578 aaPredicted RBP10.63□□□□□ -0.71
HMGB1P24-202ENST00000615653 SGIP1Q9BQI5 828 aa10.62□□□□□ -0.71
HMGB1P24-202ENST00000615653 RASEFQ8IZ41 740 aa10.61□□□□□ -0.71
HMGB1P24-202ENST00000615653 PROM2Q8N271 834 aa10.6□□□□□ -0.71
HMGB1P24-202ENST00000615653 PCDHB13Q9Y5F0 798 aa10.54□□□□□ -0.72
HMGB1P24-202ENST00000615653 SNPHO15079 494 aa10.53□□□□□ -0.72
HMGB1P24-202ENST00000615653 PLCG2P16885 1265 aa10.53□□□□□ -0.72
HMGB1P24-202ENST00000615653 PLEKHG5O94827 1062 aa10.51□□□□□ -0.73
HMGB1P24-202ENST00000615653 IRX5P78411 483 aaPredicted RBP10.51□□□□□ -0.73
HMGB1P24-202ENST00000615653 MARVELD3Q96A59 401 aa10.49□□□□□ -0.73
HMGB1P24-202ENST00000615653 TMEM106CQ9BVX2 250 aa10.48□□□□□ -0.73
HMGB1P24-202ENST00000615653 IFNL1Q8IU54 200 aa10.47□□□□□ -0.73
HMGB1P24-202ENST00000615653 MIER1Q8N108 512 aa10.47□□□□□ -0.73
HMGB1P24-202ENST00000615653 OCEL1Q9H607 264 aa10.44□□□□□ -0.74
HMGB1P24-202ENST00000615653 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.43□□□□□ -0.74
HMGB1P24-202ENST00000615653 KRTAP3-3Q9BYR6 98 aa10.41□□□□□ -0.74
HMGB1P24-202ENST00000615653 KRTAP3-2Q9BYR7 98 aa10.41□□□□□ -0.74
HMGB1P24-202ENST00000615653 NUBP1P53384 320 aa10.38□□□□□ -0.75
HMGB1P24-202ENST00000615653 POTEB3A0JP26 581 aa10.36□□□□□ -0.75
HMGB1P24-202ENST00000615653 EMP3P54852 163 aa10.36□□□□□ -0.75
HMGB1P24-202ENST00000615653 POTEBQ6S5H4 581 aa10.36□□□□□ -0.75
HMGB1P24-202ENST00000615653 HS3ST6Q96QI5 342 aa10.34□□□□□ -0.75
HMGB1P24-202ENST00000615653 FAM205CA6NFA0 338 aa10.3□□□□□ -0.76
HMGB1P24-202ENST00000615653 PLCD3Q8N3E9 789 aa10.3□□□□□ -0.76
HMGB1P24-202ENST00000615653 ZBTB47Q9UFB7 747 aaPredicted RBP10.3□□□□□ -0.76
HMGB1P24-202ENST00000615653 FAM212AQ96EL1 285 aa10.28□□□□□ -0.76
HMGB1P24-202ENST00000615653 C3orf67Q6ZVT6 689 aa10.24□□□□□ -0.77
HMGB1P24-202ENST00000615653 PDCD7Q8N8D1 485 aaKnown RBP10.24□□□□□ -0.77
HMGB1P24-202ENST00000615653 L3MBTL3Q96JM7 780 aaPredicted RBP10.22□□□□□ -0.77
HMGB1P24-202ENST00000615653 PCDHB8Q9UN66 801 aa10.16□□□□□ -0.78
HMGB1P24-202ENST00000615653 PYGBP11216 843 aa10.15□□□□□ -0.78
HMGB1P24-202ENST00000615653 RNF166Q96A37 237 aaPredicted RBP10.15□□□□□ -0.78
HMGB1P24-202ENST00000615653 DCAF8Q5TAQ9 597 aa10.11□□□□□ -0.79
HMGB1P24-202ENST00000615653 HOXB3P14651 431 aaPredicted RBP10.1□□□□□ -0.79
HMGB1P24-202ENST00000615653 MKRN3Q13064 507 aaKnown RBP10.1□□□□□ -0.79
HMGB1P24-202ENST00000615653 HOXB1P14653 301 aaPredicted RBP10.09□□□□□ -0.79
HMGB1P24-202ENST00000615653 EHMT2Q96KQ7 1210 aa10.07□□□□□ -0.8
HMGB1P24-202ENST00000615653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.07□□□□□ -0.8
HMGB1P24-202ENST00000615653 GOLGA2Q08379 1002 aa10.06□□□□□ -0.8
HMGB1P24-202ENST00000615653 ILDR1Q86SU0 546 aaPredicted RBP10.06□□□□□ -0.8
HMGB1P24-202ENST00000615653 MYT1LQ9UL68 1186 aa10.05□□□□□ -0.8
HMGB1P24-202ENST00000615653 ERBB3P21860 1342 aa10.04□□□□□ -0.8
HMGB1P24-202ENST00000615653 ZNF467Q7Z7K2 595 aaPredicted RBP10.02□□□□□ -0.81
HMGB1P24-202ENST00000615653 ZNF710Q8N1W2 664 aa10□□□□□ -0.81
HMGB1P24-202ENST00000615653 DPY19L2Q6NUT2 758 aa9.99□□□□□ -0.81
HMGB1P24-202ENST00000615653 DOK7Q18PE1 504 aa9.98□□□□□ -0.81
HMGB1P24-202ENST00000615653 PTGER2P43116 358 aa9.95□□□□□ -0.82
HMGB1P24-202ENST00000615653 PSEN1P49768 467 aa9.95□□□□□ -0.82
HMGB1P24-202ENST00000615653 VARS2Q5ST30 1063 aaKnown RBP9.95□□□□□ -0.82
HMGB1P24-202ENST00000615653 BOLA1Q9Y3E2 137 aa9.95□□□□□ -0.82
HMGB1P24-202ENST00000615653 ZNF687Q8N1G0 1237 aa9.94□□□□□ -0.82
HMGB1P24-202ENST00000615653 CHRM1P11229 460 aaPredicted RBP9.93□□□□□ -0.82
HMGB1P24-202ENST00000615653 G3V3G9 751 aa9.92□□□□□ -0.82
HMGB1P24-202ENST00000615653 RIMBP2O15034 1052 aa9.9□□□□□ -0.82
HMGB1P24-202ENST00000615653 GSE1Q14687 1217 aa9.9□□□□□ -0.82
HMGB1P24-202ENST00000615653 ZSWIM6Q9HCJ5 1215 aa9.86□□□□□ -0.83
HMGB1P24-202ENST00000615653 PDAP1Q13442 181 aaKnown RBP9.84□□□□□ -0.83
HMGB1P24-202ENST00000615653 CABP2Q9NPB3 220 aa9.82□□□□□ -0.84
HMGB1P24-202ENST00000615653 GPR153Q6NV75 609 aa9.81□□□□□ -0.84
HMGB1P24-202ENST00000615653 ANKRD13DQ6ZTN6 518 aa9.78□□□□□ -0.84
HMGB1P24-202ENST00000615653 TMEM92Q6UXU6 159 aa9.75□□□□□ -0.85
HMGB1P24-202ENST00000615653 PLA2G2EQ9NZK7 142 aa9.75□□□□□ -0.85
HMGB1P24-202ENST00000615653 LSM11P83369 360 aaKnown RBP eCLIP9.73□□□□□ -0.85
HMGB1P24-202ENST00000615653 KLHL34Q8N239 644 aa9.7□□□□□ -0.86
HMGB1P24-202ENST00000615653 FBXO3Q9UK99 471 aa9.7□□□□□ -0.86
HMGB1P24-202ENST00000615653 ZNF316A6NFI3 1004 aaPredicted RBP9.69□□□□□ -0.86
HMGB1P24-202ENST00000615653 MICALL2Q8IY33 904 aa9.68□□□□□ -0.86
HMGB1P24-202ENST00000615653 FKBP8Q14318 412 aa9.67□□□□□ -0.86
HMGB1P24-202ENST00000615653 ARSIQ5FYB1 569 aa9.67□□□□□ -0.86
HMGB1P24-202ENST00000615653 HCSTQ9UBK5 93 aa9.67□□□□□ -0.86
HMGB1P24-202ENST00000615653 EFCAB3Q8N7B9 438 aa9.64□□□□□ -0.87
HMGB1P24-202ENST00000615653 PBX2P40425 430 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms