RNA–Protein interactions for RNA: ENST00000612396.4

LARP4B-211, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LARP4B, Length 8,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-211ENST00000612396 CDCA8Q53HL2 280 aa21.55■■□□□ 1.04
LARP4B-211ENST00000612396 MS4A1P11836 297 aa21.55■■□□□ 1.04
LARP4B-211ENST00000612396 EIF4G2P78344 907 aaKnown RBP eCLIP21.51■■□□□ 1.034e-8■■□□□ 13.7
LARP4B-211ENST00000612396 CFAP53Q96M91 514 aa21.5■■□□□ 1.03
LARP4B-211ENST00000612396 CCDC180Q9P1Z9 1646 aa21.5■■□□□ 1.03
LARP4B-211ENST00000612396 MSNP26038 577 aaKnown RBP21.47■■□□□ 1.03
LARP4B-211ENST00000612396 NOP58Q9Y2X3 529 aaKnown RBP21.47■■□□□ 1.03
LARP4B-211ENST00000612396 CHGAP10645 457 aaKnown RBP21.45■■□□□ 1.02
LARP4B-211ENST00000612396 FTSJ3Q8IY81 847 aaKnown RBP21.44■■□□□ 1.02
LARP4B-211ENST00000612396 USP35Q9P2H5 1018 aa21.43■■□□□ 1.02
LARP4B-211ENST00000612396 SALL2Q9Y467 1007 aaPredicted RBP21.43■■□□□ 1.02
LARP4B-211ENST00000612396 SCAF1Q9H7N4 1312 aaKnown RBP21.41■■□□□ 1.02
LARP4B-211ENST00000612396 PPP4R2Q9NY27 417 aa21.39■■□□□ 1.02
LARP4B-211ENST00000612396 TSPY4P0CV99 314 aa21.39■■□□□ 1.02
LARP4B-211ENST00000612396 TSPY10P0CW01 314 aa21.39■■□□□ 1.02
LARP4B-211ENST00000612396 NPM1P06748 294 aaKnown RBP eCLIP21.36■■□□□ 1.01
LARP4B-211ENST00000612396 RSF1Q96T23 1441 aaPredicted RBP21.35■■□□□ 1.01
LARP4B-211ENST00000612396 HSP90AB1P08238 724 aaKnown RBP21.35■■□□□ 1.01
LARP4B-211ENST00000612396 P3H3Q8IVL6 736 aa21.35■■□□□ 1.01
LARP4B-211ENST00000612396 PNNQ9H307 717 aaKnown RBP21.34■■□□□ 1.01
LARP4B-211ENST00000612396 MTUS2Q5JR59 1369 aa21.33■■□□□ 1.01
LARP4B-211ENST00000612396 HSCBQ8IWL3 235 aa21.32■■□□□ 1
LARP4B-211ENST00000612396 GOLGA6L4A6NEF3 574 aa21.31■■□□□ 1
LARP4B-211ENST00000612396 MCCP23508 829 aa21.31■■□□□ 1
LARP4B-211ENST00000612396 KNSTRNQ9Y448 316 aa21.29■■□□□ 1
LARP4B-211ENST00000612396 EEA1Q15075 1411 aa21.28■■□□□ 1
LARP4B-211ENST00000612396 ARID4BQ4LE39 1312 aaPredicted RBP21.28■■□□□ 1
LARP4B-211ENST00000612396 MIER1Q8N108 512 aa21.28■■□□□ 1
LARP4B-211ENST00000612396 KIAA2012Q0VF49 1180 aa21.26■□□□□ 0.99
LARP4B-211ENST00000612396 HAP1P54257 671 aaPredicted RBP21.24■□□□□ 0.99
LARP4B-211ENST00000612396 NUDCQ9Y266 331 aa21.23■□□□□ 0.99
LARP4B-211ENST00000612396 FGD1P98174 961 aa21.22■□□□□ 0.99
LARP4B-211ENST00000612396 MAPK8IP3Q9UPT6 1336 aa21.22■□□□□ 0.99
LARP4B-211ENST00000612396 SYAP1Q96A49 352 aaPredicted RBP21.22■□□□□ 0.99
LARP4B-211ENST00000612396 PLCB2Q00722 1185 aa21.21■□□□□ 0.99
LARP4B-211ENST00000612396 IRX6P78412 446 aaPredicted RBP21.2■□□□□ 0.98
LARP4B-211ENST00000612396 HTATSF1O43719 755 aaKnown RBP21.2■□□□□ 0.98
LARP4B-211ENST00000612396 GBP4Q96PP9 640 aa21.2■□□□□ 0.98
LARP4B-211ENST00000612396 ARID3CA6NKF2 412 aa21.19■□□□□ 0.98
LARP4B-211ENST00000612396 TNNT3P45378 269 aaPredicted RBP21.18■□□□□ 0.98
LARP4B-211ENST00000612396 DRC7Q8IY82 874 aa21.17■□□□□ 0.98
LARP4B-211ENST00000612396 CLIP1P30622 1438 aa21.17■□□□□ 0.98
LARP4B-211ENST00000612396 GOLGA6L1Q8N7Z2 621 aa21.16■□□□□ 0.98
LARP4B-211ENST00000612396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.15■□□□□ 0.989e-8■□□□□ 8.3
LARP4B-211ENST00000612396 ABCC9O60706 1549 aa21.15■□□□□ 0.98
LARP4B-211ENST00000612396 KCNJ4P48050 445 aa21.14■□□□□ 0.98
LARP4B-211ENST00000612396 KDM2AQ9Y2K7 1162 aa21.14■□□□□ 0.97
LARP4B-211ENST00000612396 CCDC34Q96HJ3 373 aa21.14■□□□□ 0.97
LARP4B-211ENST00000612396 LAS1LQ9Y4W2 734 aaKnown RBP21.13■□□□□ 0.97
LARP4B-211ENST00000612396 PABPN1Q86U42 306 aaKnown RBP eCLIP21.11■□□□□ 0.974e-8■■■■■ 28.7
LARP4B-211ENST00000612396 TPM4P67936 248 aa21.11■□□□□ 0.97
LARP4B-211ENST00000612396 SUPT16HQ9Y5B9 1047 aaKnown RBP21.1■□□□□ 0.97
LARP4B-211ENST00000612396 GOLGA3Q08378 1498 aa21.09■□□□□ 0.97
LARP4B-211ENST00000612396 PPP1R15AO75807 674 aaPredicted RBP21.08■□□□□ 0.97
LARP4B-211ENST00000612396 DEKP35659 375 aaKnown RBP21.07■□□□□ 0.96
LARP4B-211ENST00000612396 NOC3LQ8WTT2 800 aaKnown RBP21.07■□□□□ 0.96
LARP4B-211ENST00000612396 OS9Q13438 667 aaPredicted RBP21.07■□□□□ 0.96
LARP4B-211ENST00000612396 CHIC2Q9UKJ5 165 aa21.06■□□□□ 0.96
LARP4B-211ENST00000612396 CSPP1Q1MSJ5 1256 aa21.06■□□□□ 0.96
LARP4B-211ENST00000612396 SETQ01105 290 aaPredicted RBP21.05■□□□□ 0.96
LARP4B-211ENST00000612396 RTN4Q9NQC3 1192 aaKnown RBP21.03■□□□□ 0.96
LARP4B-211ENST00000612396 PHF14O94880 888 aa21.02■□□□□ 0.96
LARP4B-211ENST00000612396 CHMP4AQ9BY43 222 aa21.02■□□□□ 0.96
LARP4B-211ENST00000612396 RGS3P49796 1198 aa21.02■□□□□ 0.96
LARP4B-211ENST00000612396 TIMELESSQ9UNS1 1208 aa21.02■□□□□ 0.96
LARP4B-211ENST00000612396 GOLGA2Q08379 1002 aa21.02■□□□□ 0.95
LARP4B-211ENST00000612396 CCER2I3L3R5 266 aa20.99■□□□□ 0.95
LARP4B-211ENST00000612396 GNL2Q13823 731 aaKnown RBP20.98■□□□□ 0.95
LARP4B-211ENST00000612396 SCRIBQ14160 1630 aa20.98■□□□□ 0.95
LARP4B-211ENST00000612396 C14orf37Q86TY3 774 aa20.96■□□□□ 0.95
LARP4B-211ENST00000612396 KIAA1211Q6ZU35 1233 aa20.95■□□□□ 0.95
LARP4B-211ENST00000612396 IPO8O15397 1037 aaKnown RBP20.95■□□□□ 0.94
LARP4B-211ENST00000612396 CARD11Q9BXL7 1154 aa20.95■□□□□ 0.94
LARP4B-211ENST00000612396 RSPH6AQ9H0K4 717 aa20.94■□□□□ 0.94
LARP4B-211ENST00000612396 CALD1Q05682 793 aaKnown RBP20.94■□□□□ 0.94
LARP4B-211ENST00000612396 A0A0G2JS52 829 aa20.94■□□□□ 0.94
LARP4B-211ENST00000612396 TCERG1O14776 1098 aaKnown RBP20.92■□□□□ 0.94
LARP4B-211ENST00000612396 NAP1L2Q9ULW6 460 aaPredicted RBP20.91■□□□□ 0.94
LARP4B-211ENST00000612396 TPRNQ4KMQ1 711 aa20.91■□□□□ 0.94
LARP4B-211ENST00000612396 FRAT1Q92837 279 aaPredicted RBP20.91■□□□□ 0.94
LARP4B-211ENST00000612396 GOLGA6L3A6NEY3 463 aa20.9■□□□□ 0.94
LARP4B-211ENST00000612396 HDAC5Q9UQL6 1122 aa20.89■□□□□ 0.93
LARP4B-211ENST00000612396 ZCCHC6Q5VYS8 1495 aaKnown RBP20.88■□□□□ 0.93
LARP4B-211ENST00000612396 TULP1O00294 542 aaPredicted RBP20.88■□□□□ 0.93
LARP4B-211ENST00000612396 A0A0U1RQG5 324 aaPredicted RBP20.87■□□□□ 0.93
LARP4B-211ENST00000612396 CEP162Q5TB80 1403 aa20.87■□□□□ 0.93
LARP4B-211ENST00000612396 CHMP4CQ96CF2 233 aa20.86■□□□□ 0.93
LARP4B-211ENST00000612396 GPS2Q13227 327 aa20.85■□□□□ 0.93
LARP4B-211ENST00000612396 CEP164Q9UPV0 1460 aa20.84■□□□□ 0.93
LARP4B-211ENST00000612396 NPHP1O15259 732 aa20.84■□□□□ 0.93
LARP4B-211ENST00000612396 PLEKHD1A6NEE1 506 aa20.84■□□□□ 0.93
LARP4B-211ENST00000612396 CALRP27797 417 aaKnown RBP20.83■□□□□ 0.93
LARP4B-211ENST00000612396 TMF1P82094 1093 aa20.83■□□□□ 0.93
LARP4B-211ENST00000612396 RWDD1Q9H446 243 aaPredicted RBP20.83■□□□□ 0.93
LARP4B-211ENST00000612396 KIF3AQ9Y496 699 aa20.83■□□□□ 0.93
LARP4B-211ENST00000612396 ZBTB7CA1YPR0 619 aa20.83■□□□□ 0.92
LARP4B-211ENST00000612396 CLSTN1O94985 981 aa20.82■□□□□ 0.92
LARP4B-211ENST00000612396 GPATCH3Q96I76 525 aa20.82■□□□□ 0.92
LARP4B-211ENST00000612396 DDX11L8A8MPP1 907 aa20.81■□□□□ 0.92
LARP4B-211ENST00000612396 TPM3P06753 285 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms