RNA–Protein interactions for RNA: ENST00000611273.1

FMR1-214, Transcript of fragile X mental retardation 1, humanhuman

TSL 2

Gene FMR1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-214ENST00000611273 TSPYL2Q9H2G4 693 aaPredicted RBP13.32□□□□□ -0.28
FMR1-214ENST00000611273 POTEMA6NI47 508 aa13.22□□□□□ -0.29
FMR1-214ENST00000611273 PELP1Q8IZL8 1130 aaKnown RBP13.19□□□□□ -0.3
FMR1-214ENST00000611273 MS4A3Q96HJ5 214 aa13.19□□□□□ -0.3
FMR1-214ENST00000611273 ZBTB47Q9UFB7 747 aaPredicted RBP13.18□□□□□ -0.3
FMR1-214ENST00000611273 POTEGQ6S5H5 508 aa13.17□□□□□ -0.3
FMR1-214ENST00000611273 CCDC61Q9Y6R9 512 aa13.13□□□□□ -0.31
FMR1-214ENST00000611273 RASEFQ8IZ41 740 aa13.12□□□□□ -0.31
FMR1-214ENST00000611273 POTEJP0CG39 1038 aa13.11□□□□□ -0.31
FMR1-214ENST00000611273 FBXO3Q9UK99 471 aa13.09□□□□□ -0.31
FMR1-214ENST00000611273 KIF12Q96FN5 646 aa13.07□□□□□ -0.32
FMR1-214ENST00000611273 LCE2DQ5TA82 110 aaPredicted RBP13.05□□□□□ -0.32
FMR1-214ENST00000611273 MAP3K13O43283 966 aa13.02□□□□□ -0.33
FMR1-214ENST00000611273 ATMINO43313 823 aaPredicted RBP13.02□□□□□ -0.33
FMR1-214ENST00000611273 ASTLQ6HA08 431 aaPredicted RBP13.02□□□□□ -0.33
FMR1-214ENST00000611273 FAM212AQ96EL1 285 aa13.01□□□□□ -0.33
FMR1-214ENST00000611273 SLC39A7Q92504 469 aa13□□□□□ -0.33
FMR1-214ENST00000611273 METRNQ9UJH8 293 aa13□□□□□ -0.33
FMR1-214ENST00000611273 NUBP1P53384 320 aa12.98□□□□□ -0.33
FMR1-214ENST00000611273 C7P10643 843 aa12.96□□□□□ -0.33
FMR1-214ENST00000611273 ATN1P54259 1190 aaPredicted RBP12.95□□□□□ -0.34
FMR1-214ENST00000611273 PCDHB13Q9Y5F0 798 aa12.95□□□□□ -0.34
FMR1-214ENST00000611273 KLHL34Q8N239 644 aa12.94□□□□□ -0.34
FMR1-214ENST00000611273 PCDH10Q9P2E7 1040 aa12.94□□□□□ -0.34
FMR1-214ENST00000611273 BMP2KQ9NSY1 1161 aaPredicted RBP12.93□□□□□ -0.34
FMR1-214ENST00000611273 TRPC6Q9Y210 931 aa12.93□□□□□ -0.34
FMR1-214ENST00000611273 DCAF8Q5TAQ9 597 aa12.92□□□□□ -0.34
FMR1-214ENST00000611273 TIE1P35590 1138 aa12.9□□□□□ -0.34
FMR1-214ENST00000611273 VASPP50552 380 aaPredicted RBP12.89□□□□□ -0.35
FMR1-214ENST00000611273 SGIP1Q9BQI5 828 aa12.87□□□□□ -0.35
FMR1-214ENST00000611273 TTLL13PA6NNM8 815 aa12.84□□□□□ -0.35
FMR1-214ENST00000611273 POTEFA5A3E0 1075 aa12.83□□□□□ -0.36
FMR1-214ENST00000611273 SEC24BO95487 1268 aa12.82□□□□□ -0.36
FMR1-214ENST00000611273 PYGBP11216 843 aa12.82□□□□□ -0.36
FMR1-214ENST00000611273 IFNL1Q8IU54 200 aa12.82□□□□□ -0.36
FMR1-214ENST00000611273 MAMSTRQ6ZN01 415 aa12.8□□□□□ -0.36
FMR1-214ENST00000611273 FAM163AQ96GL9 167 aaPredicted RBP12.8□□□□□ -0.36
FMR1-214ENST00000611273 TRIM35Q9UPQ4 493 aa12.79□□□□□ -0.36
FMR1-214ENST00000611273 TMEM106CQ9BVX2 250 aa12.78□□□□□ -0.36
FMR1-214ENST00000611273 SCUBE2Q9NQ36 999 aa12.78□□□□□ -0.36
FMR1-214ENST00000611273 GSE1Q14687 1217 aa12.75□□□□□ -0.37
FMR1-214ENST00000611273 IER5LQ5T953 404 aa12.7□□□□□ -0.38
FMR1-214ENST00000611273 PCDHB8Q9UN66 801 aa12.69□□□□□ -0.38
FMR1-214ENST00000611273 COLQQ9Y215 455 aaPredicted RBP12.69□□□□□ -0.38
FMR1-214ENST00000611273 PLCG2P16885 1265 aa12.66□□□□□ -0.38
FMR1-214ENST00000611273 SPOCK2Q92563 424 aa12.64□□□□□ -0.39
FMR1-214ENST00000611273 CIZ1Q9ULV3 898 aaPredicted RBP12.64□□□□□ -0.39
FMR1-214ENST00000611273 ZNF467Q7Z7K2 595 aaPredicted RBP12.63□□□□□ -0.39
FMR1-214ENST00000611273 IFNLR1Q8IU57 520 aaPredicted RBP12.61□□□□□ -0.39
FMR1-214ENST00000611273 GOLGA2Q08379 1002 aa12.6□□□□□ -0.39
FMR1-214ENST00000611273 CDAN1Q8IWY9 1227 aa12.59□□□□□ -0.39
FMR1-214ENST00000611273 CHRM1P11229 460 aaPredicted RBP12.53□□□□□ -0.4
FMR1-214ENST00000611273 OCEL1Q9H607 264 aa12.53□□□□□ -0.4
FMR1-214ENST00000611273 IRX5P78411 483 aaPredicted RBP12.52□□□□□ -0.41
FMR1-214ENST00000611273 MKRN3Q13064 507 aaKnown RBP12.52□□□□□ -0.41
FMR1-214ENST00000611273 PSEN1P49768 467 aa12.51□□□□□ -0.41
FMR1-214ENST00000611273 SLAIN1Q8ND83 568 aa12.51□□□□□ -0.41
FMR1-214ENST00000611273 ST18O60284 1047 aa12.46□□□□□ -0.41
FMR1-214ENST00000611273 PDAP1Q13442 181 aaKnown RBP12.46□□□□□ -0.41
FMR1-214ENST00000611273 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.427e-13■■■□□ 14.6
FMR1-214ENST00000611273 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.42□□□□□ -0.42
FMR1-214ENST00000611273 CABP2Q9NPB3 220 aa12.39□□□□□ -0.43
FMR1-214ENST00000611273 C3orf67Q6ZVT6 689 aa12.38□□□□□ -0.43
FMR1-214ENST00000611273 TRIM41Q8WV44 630 aa12.38□□□□□ -0.43
FMR1-214ENST00000611273 L3MBTL3Q96JM7 780 aaPredicted RBP12.36□□□□□ -0.43
FMR1-214ENST00000611273 MMRN1Q13201 1228 aa12.35□□□□□ -0.43
FMR1-214ENST00000611273 PDCD7Q8N8D1 485 aaKnown RBP12.34□□□□□ -0.43
FMR1-214ENST00000611273 G3V3G9 751 aa12.33□□□□□ -0.44
FMR1-214ENST00000611273 SPNS2Q8IVW8 549 aa12.33□□□□□ -0.44
FMR1-214ENST00000611273 SNPHO15079 494 aa12.29□□□□□ -0.44
FMR1-214ENST00000611273 DPY19L2Q6NUT2 758 aa12.24□□□□□ -0.45
FMR1-214ENST00000611273 RIOK3O14730 519 aaKnown RBP12.22□□□□□ -0.45
FMR1-214ENST00000611273 EFCAB3Q8N7B9 438 aa12.21□□□□□ -0.45
FMR1-214ENST00000611273 BOLA1Q9Y3E2 137 aa12.2□□□□□ -0.46
FMR1-214ENST00000611273 MARVELD3Q96A59 401 aa12.19□□□□□ -0.46
FMR1-214ENST00000611273 TMEM121BQ9BXQ6 578 aaPredicted RBP12.19□□□□□ -0.46
FMR1-214ENST00000611273 VGFO15240 615 aaPredicted RBP12.17□□□□□ -0.46
FMR1-214ENST00000611273 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.16□□□□□ -0.46
FMR1-214ENST00000611273 ILDR1Q86SU0 546 aaPredicted RBP12.16□□□□□ -0.46
FMR1-214ENST00000611273 ZFP91Q96JP5 570 aaPredicted RBP12.16□□□□□ -0.46
FMR1-214ENST00000611273 RNF25Q96BH1 459 aaPredicted RBP12.14□□□□□ -0.47
FMR1-214ENST00000611273 TAOK2Q9UL54 1235 aa12.13□□□□□ -0.47
FMR1-214ENST00000611273 POTEB3A0JP26 581 aa12.09□□□□□ -0.47
FMR1-214ENST00000611273 POTEBQ6S5H4 581 aa12.09□□□□□ -0.47
FMR1-214ENST00000611273 SOX12O15370 315 aa12.08□□□□□ -0.48
FMR1-214ENST00000611273 ECM2O94769 699 aaPredicted RBP12.08□□□□□ -0.48
FMR1-214ENST00000611273 EMP3P54852 163 aa12.08□□□□□ -0.48
FMR1-214ENST00000611273 KRTAP3-3Q9BYR6 98 aa12.08□□□□□ -0.48
FMR1-214ENST00000611273 KRTAP3-2Q9BYR7 98 aa12.08□□□□□ -0.48
FMR1-214ENST00000611273 ZNF710Q8N1W2 664 aa12.04□□□□□ -0.48
FMR1-214ENST00000611273 BCL11BQ9C0K0 894 aaPredicted RBP12.04□□□□□ -0.48
FMR1-214ENST00000611273 PHF8Q9UPP1 1060 aa12.04□□□□□ -0.48
FMR1-214ENST00000611273 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
FMR1-214ENST00000611273 MICALL2Q8IY33 904 aa12.01□□□□□ -0.49
FMR1-214ENST00000611273 STK25O00506 426 aa12□□□□□ -0.49
FMR1-214ENST00000611273 FAM205CA6NFA0 338 aa11.99□□□□□ -0.49
FMR1-214ENST00000611273 NLRP6P59044 892 aa11.98□□□□□ -0.49
FMR1-214ENST00000611273 DOK7Q18PE1 504 aa11.98□□□□□ -0.49
FMR1-214ENST00000611273 MS4A4AQ96JQ5 239 aa11.97□□□□□ -0.49
FMR1-214ENST00000611273 HS3ST6Q96QI5 342 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms