RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 WASHC2AQ641Q2 1341 aa23.76■■□□□ 1.39
CDK11B-205ENST00000611150 WASHC2CQ9Y4E1 1318 aa23.75■■□□□ 1.39
CDK11B-205ENST00000611150 WIZO95785 1651 aa23.73■■□□□ 1.39
CDK11B-205ENST00000611150 USP35Q9P2H5 1018 aa23.66■■□□□ 1.38
CDK11B-205ENST00000611150 RSF1Q96T23 1441 aaPredicted RBP23.64■■□□□ 1.38
CDK11B-205ENST00000611150 ERCC6Q03468 1493 aa23.64■■□□□ 1.37
CDK11B-205ENST00000611150 NESP48681 1621 aa23.64■■□□□ 1.37
CDK11B-205ENST00000611150 BRPF3Q9ULD4 1205 aa23.64■■□□□ 1.37
CDK11B-205ENST00000611150 BCL11BQ9C0K0 894 aaPredicted RBP23.63■■□□□ 1.37
CDK11B-205ENST00000611150 RANGAP1P46060 587 aaPredicted RBP23.59■■□□□ 1.37
CDK11B-205ENST00000611150 KCNH8Q96L42 1107 aa23.59■■□□□ 1.37
CDK11B-205ENST00000611150 IPO9Q96P70 1041 aaKnown RBP23.58■■□□□ 1.37
CDK11B-205ENST00000611150 ZBTB47Q9UFB7 747 aaPredicted RBP23.58■■□□□ 1.37
CDK11B-205ENST00000611150 LAMC3Q9Y6N6 1575 aa23.56■■□□□ 1.36
CDK11B-205ENST00000611150 NEFMP07197 916 aa23.55■■□□□ 1.36
CDK11B-205ENST00000611150 FAM43AQ8N2R8 423 aa23.55■■□□□ 1.36
CDK11B-205ENST00000611150 ANP32AP39687 249 aaKnown RBP23.54■■□□□ 1.36
CDK11B-205ENST00000611150 RRP9O43818 475 aaKnown RBP23.52■■□□□ 1.36
CDK11B-205ENST00000611150 HSP90AA2PQ14568 343 aaPredicted RBP23.51■■□□□ 1.35
CDK11B-205ENST00000611150 TAF7LQ5H9L4 462 aa23.5■■□□□ 1.35
CDK11B-205ENST00000611150 EHMT2Q96KQ7 1210 aa23.49■■□□□ 1.35
CDK11B-205ENST00000611150 CUX2O14529 1486 aa23.47■■□□□ 1.35
CDK11B-205ENST00000611150 TOP2AP11388 1531 aaKnown RBP23.47■■□□□ 1.35
CDK11B-205ENST00000611150 CADPSQ9ULU8 1353 aa23.45■■□□□ 1.34
CDK11B-205ENST00000611150 KLHL34Q8N239 644 aa23.43■■□□□ 1.34
CDK11B-205ENST00000611150 PDS5BQ9NTI5 1447 aa23.42■■□□□ 1.34
CDK11B-205ENST00000611150 PPP4R2Q9NY27 417 aa23.4■■□□□ 1.34
CDK11B-205ENST00000611150 NCBP3Q53F19 620 aaKnown RBP23.38■■□□□ 1.33
CDK11B-205ENST00000611150 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
CDK11B-205ENST00000611150 GSE1Q14687 1217 aa23.37■■□□□ 1.33
CDK11B-205ENST00000611150 KIF21AQ7Z4S6 1674 aa23.37■■□□□ 1.33
CDK11B-205ENST00000611150 THOC2Q8NI27 1593 aaKnown RBP23.33■■□□□ 1.33
CDK11B-205ENST00000611150 AEBP2Q6ZN18 517 aaPredicted RBP23.33■■□□□ 1.33
CDK11B-205ENST00000611150 TRIM52Q96A61 297 aa23.32■■□□□ 1.32
CDK11B-205ENST00000611150 HSP90AA1P07900 732 aaKnown RBP23.3■■□□□ 1.32
CDK11B-205ENST00000611150 PPM1GO15355 546 aaPredicted RBP23.29■■□□□ 1.32
CDK11B-205ENST00000611150 ARXQ96QS3 562 aa23.27■■□□□ 1.32
CDK11B-205ENST00000611150 CFTRP13569 1480 aa23.26■■□□□ 1.31
CDK11B-205ENST00000611150 IRX6P78412 446 aaPredicted RBP23.23■■□□□ 1.31
CDK11B-205ENST00000611150 CCDC88BA6NC98 1476 aa23.19■■□□□ 1.3
CDK11B-205ENST00000611150 CCER2I3L3R5 266 aa23.18■■□□□ 1.3
CDK11B-205ENST00000611150 MRC2Q9UBG0 1479 aa23.18■■□□□ 1.3
CDK11B-205ENST00000611150 FANCD2Q9BXW9 1451 aa23.17■■□□□ 1.3
CDK11B-205ENST00000611150 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
CDK11B-205ENST00000611150 LAS1LQ9Y4W2 734 aaKnown RBP23.16■■□□□ 1.3
CDK11B-205ENST00000611150 CALD1Q05682 793 aaKnown RBP23.14■■□□□ 1.29
CDK11B-205ENST00000611150 HNRNPUL2Q1KMD3 747 aaKnown RBP23.13■■□□□ 1.29
CDK11B-205ENST00000611150 PRDM4Q9UKN5 801 aa23.12■■□□□ 1.29
CDK11B-205ENST00000611150 ZNF326Q5BKZ1 582 aaKnown RBP23.11■■□□□ 1.29
CDK11B-205ENST00000611150 WDR62O43379 1518 aa23.11■■□□□ 1.29
CDK11B-205ENST00000611150 NAP1L5Q96NT1 182 aaPredicted RBP23.1■■□□□ 1.29
CDK11B-205ENST00000611150 FRAT1Q92837 279 aaPredicted RBP23.09■■□□□ 1.29
CDK11B-205ENST00000611150 B4GALNT3Q6L9W6 998 aa23.08■■□□□ 1.29
CDK11B-205ENST00000611150 NAP1L2Q9ULW6 460 aaPredicted RBP23.08■■□□□ 1.29
CDK11B-205ENST00000611150 PRDM2Q13029 1718 aa23.08■■□□□ 1.28
CDK11B-205ENST00000611150 EEA1Q15075 1411 aa23.05■■□□□ 1.28
CDK11B-205ENST00000611150 CENPJQ9HC77 1338 aaPredicted RBP23.04■■□□□ 1.28
CDK11B-205ENST00000611150 BBXQ8WY36 941 aaPredicted RBP23.03■■□□□ 1.28
CDK11B-205ENST00000611150 DNAJC5Q9H3Z4 198 aa23.01■■□□□ 1.27
CDK11B-205ENST00000611150 RSPH4AQ5TD94 716 aa23■■□□□ 1.27
CDK11B-205ENST00000611150 PAXIP1Q6ZW49 1069 aaPredicted RBP23■■□□□ 1.27
CDK11B-205ENST00000611150 RGS3P49796 1198 aa22.98■■□□□ 1.27
CDK11B-205ENST00000611150 PNNQ9H307 717 aaKnown RBP22.97■■□□□ 1.27
CDK11B-205ENST00000611150 RRAGDQ9NQL2 400 aaPredicted RBP22.97■■□□□ 1.27
CDK11B-205ENST00000611150 URB2Q14146 1524 aaKnown RBP22.95■■□□□ 1.27
CDK11B-205ENST00000611150 DCAF11Q8TEB1 546 aa22.94■■□□□ 1.26
CDK11B-205ENST00000611150 PDCL3Q9H2J4 239 aa22.94■■□□□ 1.26
CDK11B-205ENST00000611150 ANP32CO43423 234 aa22.94■■□□□ 1.26
CDK11B-205ENST00000611150 DDX10Q13206 875 aaKnown RBP22.93■■□□□ 1.26
CDK11B-205ENST00000611150 IPO4Q8TEX9 1081 aaKnown RBP22.9■■□□□ 1.26
CDK11B-205ENST00000611150 CHMP4BQ9H444 224 aaKnown RBP22.9■■□□□ 1.26
CDK11B-205ENST00000611150 CANXP27824 592 aaKnown RBP22.89■■□□□ 1.25
CDK11B-205ENST00000611150 NFKBIBQ15653 356 aa22.89■■□□□ 1.25
CDK11B-205ENST00000611150 GTF2E1P29083 439 aaPredicted RBP22.88■■□□□ 1.25
CDK11B-205ENST00000611150 DHX57Q6P158 1386 aaKnown RBP22.87■■□□□ 1.25
CDK11B-205ENST00000611150 HNRNPUQ00839 825 aaKnown RBP eCLIP22.85■■□□□ 1.25
CDK11B-205ENST00000611150 CEP162Q5TB80 1403 aa22.84■■□□□ 1.25
CDK11B-205ENST00000611150 NPM2Q86SE8 214 aaKnown RBP22.83■■□□□ 1.24
CDK11B-205ENST00000611150 CNGB1Q14028 1251 aaPredicted RBP22.82■■□□□ 1.24
CDK11B-205ENST00000611150 CLCN1P35523 988 aa22.82■■□□□ 1.24
CDK11B-205ENST00000611150 PPP1R15AO75807 674 aaPredicted RBP22.81■■□□□ 1.24
CDK11B-205ENST00000611150 NCLP19338 710 aaKnown RBP22.79■■□□□ 1.24
CDK11B-205ENST00000611150 BRD2P25440 801 aaKnown RBP22.79■■□□□ 1.24
CDK11B-205ENST00000611150 STAC3Q96MF2 364 aa22.79■■□□□ 1.24
CDK11B-205ENST00000611150 TOPBP1Q92547 1522 aa22.78■■□□□ 1.24
CDK11B-205ENST00000611150 ABCC8Q09428 1581 aa22.78■■□□□ 1.24
CDK11B-205ENST00000611150 DDRGK1Q96HY6 314 aa22.75■■□□□ 1.23
CDK11B-205ENST00000611150 DNMBPQ6XZF7 1577 aa22.74■■□□□ 1.23
CDK11B-205ENST00000611150 TPM2P07951 284 aa22.7■■□□□ 1.22
CDK11B-205ENST00000611150 IFT140Q96RY7 1462 aa22.69■■□□□ 1.22
CDK11B-205ENST00000611150 L1TD1Q5T7N2 865 aaKnown RBP22.69■■□□□ 1.22
CDK11B-205ENST00000611150 DHX37Q8IY37 1157 aaKnown RBP22.62■■□□□ 1.21
CDK11B-205ENST00000611150 SMAP1Q8IYB5 467 aaPredicted RBP22.62■■□□□ 1.21
CDK11B-205ENST00000611150 ZNF608Q9ULD9 1512 aaPredicted RBP22.6■■□□□ 1.21
CDK11B-205ENST00000611150 CHMP4AQ9BY43 222 aa22.6■■□□□ 1.21
CDK11B-205ENST00000611150 FTSJ3Q8IY81 847 aaKnown RBP22.58■■□□□ 1.21
CDK11B-205ENST00000611150 TNIKQ9UKE5 1360 aa22.58■■□□□ 1.21
CDK11B-205ENST00000611150 TCERG1O14776 1098 aaKnown RBP22.58■■□□□ 1.21
CDK11B-205ENST00000611150 POLA1P09884 1462 aaPredicted RBP22.57■■□□□ 1.2
CDK11B-205ENST00000611150 PDE4AP27815 886 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms