RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 HIRIP3Q9BW71 556 aaPredicted RBP26.65■■□□□ 1.86
COL15A1-205ENST00000610452 P3H3Q8IVL6 736 aa26.64■■□□□ 1.86
COL15A1-205ENST00000610452 NCLP19338 710 aaKnown RBP26.64■■□□□ 1.86
COL15A1-205ENST00000610452 L1TD1Q5T7N2 865 aaKnown RBP26.57■■□□□ 1.84
COL15A1-205ENST00000610452 B4GALNT3Q6L9W6 998 aa26.55■■□□□ 1.84
COL15A1-205ENST00000610452 SLC24A1O60721 1099 aa26.55■■□□□ 1.84
COL15A1-205ENST00000610452 AMER1Q5JTC6 1135 aaPredicted RBP26.52■■□□□ 1.84
COL15A1-205ENST00000610452 ARID4BQ4LE39 1312 aaPredicted RBP26.52■■□□□ 1.84
COL15A1-205ENST00000610452 ZCCHC6Q5VYS8 1495 aaKnown RBP26.49■■□□□ 1.83
COL15A1-205ENST00000610452 WDR43Q15061 677 aaKnown RBP eCLIP26.47■■□□□ 1.83
COL15A1-205ENST00000610452 PNNQ9H307 717 aaKnown RBP26.46■■□□□ 1.83
COL15A1-205ENST00000610452 MSNP26038 577 aaKnown RBP26.38■■□□□ 1.81
COL15A1-205ENST00000610452 EIF4G2P78344 907 aaKnown RBP eCLIP26.38■■□□□ 1.81
COL15A1-205ENST00000610452 ARID3CA6NKF2 412 aa26.37■■□□□ 1.81
COL15A1-205ENST00000610452 VSIG10Q8N0Z9 540 aa26.37■■□□□ 1.81
COL15A1-205ENST00000610452 RSPH6AQ9H0K4 717 aa26.33■■□□□ 1.81
COL15A1-205ENST00000610452 HSP90AA2PQ14568 343 aaPredicted RBP26.3■■□□□ 1.8
COL15A1-205ENST00000610452 RGS3P49796 1198 aa26.3■■□□□ 1.8
COL15A1-205ENST00000610452 SENP3-EIF4A1A0A087X0R7 540 aa26.28■■□□□ 1.8
COL15A1-205ENST00000610452 MYH16Q9H6N6 1097 aa26.25■■□□□ 1.79
COL15A1-205ENST00000610452 ZNF777Q9ULD5 760 aaPredicted RBP26.23■■□□□ 1.79
COL15A1-205ENST00000610452 CHAF1AQ13111 956 aaPredicted RBP26.22■■□□□ 1.79
COL15A1-205ENST00000610452 IPO9Q96P70 1041 aaKnown RBP26.22■■□□□ 1.79
COL15A1-205ENST00000610452 PRKCSHP14314 528 aaPredicted RBP26.2■■□□□ 1.78
COL15A1-205ENST00000610452 ARID3AQ99856 593 aa26.2■■□□□ 1.78
COL15A1-205ENST00000610452 PLCB2Q00722 1185 aa26.19■■□□□ 1.78
COL15A1-205ENST00000610452 SCRIBQ14160 1630 aa26.18■■□□□ 1.78
COL15A1-205ENST00000610452 FBLN2P98095 1184 aa26.15■■□□□ 1.78
COL15A1-205ENST00000610452 CLIP1P30622 1438 aa26.14■■□□□ 1.78
COL15A1-205ENST00000610452 CCER2I3L3R5 266 aa26.13■■□□□ 1.77
COL15A1-205ENST00000610452 HSP90AB1P08238 724 aaKnown RBP26.13■■□□□ 1.77
COL15A1-205ENST00000610452 TPRNQ4KMQ1 711 aa26.1■■□□□ 1.77
COL15A1-205ENST00000610452 CHIC2Q9UKJ5 165 aa26.09■■□□□ 1.77
COL15A1-205ENST00000610452 CEP162Q5TB80 1403 aa26.08■■□□□ 1.77
COL15A1-205ENST00000610452 USP35Q9P2H5 1018 aa26.08■■□□□ 1.77
COL15A1-205ENST00000610452 TNNT3P45378 269 aaPredicted RBP26.06■■□□□ 1.76
COL15A1-205ENST00000610452 ZRSR1Q15695 479 aaKnown RBP26.05■■□□□ 1.76
COL15A1-205ENST00000610452 HSCBQ8IWL3 235 aa26.04■■□□□ 1.76
COL15A1-205ENST00000610452 GOLGA6L3A6NEY3 463 aa26.04■■□□□ 1.76
COL15A1-205ENST00000610452 GZF1Q9H116 711 aaPredicted RBP26.04■■□□□ 1.76
COL15A1-205ENST00000610452 TCERG1O14776 1098 aaKnown RBP26.01■■□□□ 1.75
COL15A1-205ENST00000610452 SPRYD3Q8NCJ5 442 aa26■■□□□ 1.75
COL15A1-205ENST00000610452 KDM2AQ9Y2K7 1162 aa26■■□□□ 1.75
COL15A1-205ENST00000610452 TIMELESSQ9UNS1 1208 aa25.98■■□□□ 1.75
COL15A1-205ENST00000610452 CASC1Q6TDU7 716 aa25.98■■□□□ 1.75
COL15A1-205ENST00000610452 FANCIQ9NVI1 1328 aa25.97■■□□□ 1.75
COL15A1-205ENST00000610452 PKNOX2Q96KN3 472 aa25.95■■□□□ 1.75
COL15A1-205ENST00000610452 ANO8Q9HCE9 1232 aaPredicted RBP25.95■■□□□ 1.74
COL15A1-205ENST00000610452 GOLGA6L6A8MZA4 724 aa25.95■■□□□ 1.74
COL15A1-205ENST00000610452 GSE1Q14687 1217 aa25.94■■□□□ 1.74
COL15A1-205ENST00000610452 SLKQ9H2G2 1235 aaPredicted RBP25.93■■□□□ 1.74
COL15A1-205ENST00000610452 FTSJ3Q8IY81 847 aaKnown RBP25.92■■□□□ 1.74
COL15A1-205ENST00000610452 ZBTB7CA1YPR0 619 aa25.92■■□□□ 1.74
COL15A1-205ENST00000610452 KIAA2012Q0VF49 1180 aa25.91■■□□□ 1.74
COL15A1-205ENST00000610452 NRDCO43847 1150 aa25.91■■□□□ 1.74
COL15A1-205ENST00000610452 RSF1Q96T23 1441 aaPredicted RBP25.9■■□□□ 1.74
COL15A1-205ENST00000610452 EEA1Q15075 1411 aa25.89■■□□□ 1.74
COL15A1-205ENST00000610452 GOLGA3Q08378 1498 aa25.89■■□□□ 1.74
COL15A1-205ENST00000610452 GBP4Q96PP9 640 aa25.88■■□□□ 1.73
COL15A1-205ENST00000610452 PTMSP20962 102 aa25.88■■□□□ 1.73
COL15A1-205ENST00000610452 MTUS2Q5JR59 1369 aa25.86■■□□□ 1.73
COL15A1-205ENST00000610452 SIN3AQ96ST3 1273 aa25.85■■□□□ 1.73
COL15A1-205ENST00000610452 TNIKQ9UKE5 1360 aa25.84■■□□□ 1.73
COL15A1-205ENST00000610452 FRAT1Q92837 279 aaPredicted RBP25.82■■□□□ 1.72
COL15A1-205ENST00000610452 DRC7Q8IY82 874 aa25.78■■□□□ 1.72
COL15A1-205ENST00000610452 RRP7BPQ9NSQ0 103 aa25.77■■□□□ 1.72
COL15A1-205ENST00000610452 A0A0U1RQG5 324 aaPredicted RBP25.74■■□□□ 1.71
COL15A1-205ENST00000610452 CHGAP10645 457 aaKnown RBP25.74■■□□□ 1.71
COL15A1-205ENST00000610452 PODXL2Q9NZ53 605 aa25.7■■□□□ 1.71
COL15A1-205ENST00000610452 KNSTRNQ9Y448 316 aa25.7■■□□□ 1.7
COL15A1-205ENST00000610452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.69■■□□□ 1.7
COL15A1-205ENST00000610452 GOLGA6L4A6NEF3 574 aa25.69■■□□□ 1.7
COL15A1-205ENST00000610452 MS4A1P11836 297 aa25.66■■□□□ 1.7
COL15A1-205ENST00000610452 NEUROD2Q15784 382 aa25.66■■□□□ 1.7
COL15A1-205ENST00000610452 RCAN3Q9UKA8 241 aa25.66■■□□□ 1.7
COL15A1-205ENST00000610452 TSPY4P0CV99 314 aa25.66■■□□□ 1.7
COL15A1-205ENST00000610452 TSPY10P0CW01 314 aa25.66■■□□□ 1.7
COL15A1-205ENST00000610452 CFAP53Q96M91 514 aa25.62■■□□□ 1.69
COL15A1-205ENST00000610452 CARD11Q9BXL7 1154 aa25.61■■□□□ 1.69
COL15A1-205ENST00000610452 CHMP4BQ9H444 224 aaKnown RBP25.6■■□□□ 1.69
COL15A1-205ENST00000610452 WRNQ14191 1432 aaPredicted RBP eCLIP25.58■■□□□ 1.69
COL15A1-205ENST00000610452 CEP164Q9UPV0 1460 aa25.58■■□□□ 1.69
COL15A1-205ENST00000610452 NUDCQ9Y266 331 aa25.57■■□□□ 1.68
COL15A1-205ENST00000610452 SYAP1Q96A49 352 aaPredicted RBP25.57■■□□□ 1.68
COL15A1-205ENST00000610452 PDE4AP27815 886 aa25.57■■□□□ 1.68
COL15A1-205ENST00000610452 FAM13BQ9NYF5 915 aa25.56■■□□□ 1.68
COL15A1-205ENST00000610452 CALD1Q05682 793 aaKnown RBP25.56■■□□□ 1.68
COL15A1-205ENST00000610452 SLC4A3P48751 1232 aa25.55■■□□□ 1.68
COL15A1-205ENST00000610452 ZNF771Q7L3S4 317 aaPredicted RBP25.54■■□□□ 1.68
COL15A1-205ENST00000610452 IL27Q8NEV9 243 aa25.53■■□□□ 1.68
COL15A1-205ENST00000610452 CDCA8Q53HL2 280 aa25.53■■□□□ 1.68
COL15A1-205ENST00000610452 DDX11L8A8MPP1 907 aa25.52■■□□□ 1.68
COL15A1-205ENST00000610452 CC2D1BQ5T0F9 858 aaKnown RBP25.51■■□□□ 1.67
COL15A1-205ENST00000610452 CFAP44Q96MT7 982 aa25.5■■□□□ 1.67
COL15A1-205ENST00000610452 MCCP23508 829 aa25.47■■□□□ 1.67
COL15A1-205ENST00000610452 KCNH8Q96L42 1107 aa25.47■■□□□ 1.67
COL15A1-205ENST00000610452 HSPA5P11021 654 aaKnown RBP25.46■■□□□ 1.67
COL15A1-205ENST00000610452 FAM43AQ8N2R8 423 aa25.44■■□□□ 1.66
COL15A1-205ENST00000610452 CCNB3Q8WWL7 1395 aa25.44■■□□□ 1.66
COL15A1-205ENST00000610452 MFAP1P55081 439 aaKnown RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms