RNA–Protein interactions for RNA: ENST00000610335.4

LINC02340-201, Transcript of long intergenic non-protein coding RNA 2340, humanhuman

TSL 3 BASIC

Gene LINC02340, Length 626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02340-201ENST00000610335 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
LINC02340-201ENST00000610335 POTEGQ6S5H5 508 aa13.28□□□□□ -0.28
LINC02340-201ENST00000610335 PLCD3Q8N3E9 789 aa13.28□□□□□ -0.28
LINC02340-201ENST00000610335 ABCC9O60706 1549 aa13.26□□□□□ -0.29
LINC02340-201ENST00000610335 PELP1Q8IZL8 1130 aaKnown RBP13.26□□□□□ -0.29
LINC02340-201ENST00000610335 VASPP50552 380 aaPredicted RBP13.21□□□□□ -0.29
LINC02340-201ENST00000610335 ZBTB47Q9UFB7 747 aaPredicted RBP13.21□□□□□ -0.29
LINC02340-201ENST00000610335 PAK3O75914 559 aaPredicted RBP13.16□□□□□ -0.3
LINC02340-201ENST00000610335 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
LINC02340-201ENST00000610335 METRNQ9UJH8 293 aa13.1□□□□□ -0.31
LINC02340-201ENST00000610335 LCE2DQ5TA82 110 aaPredicted RBP13.07□□□□□ -0.32
LINC02340-201ENST00000610335 MS4A3Q96HJ5 214 aa13.07□□□□□ -0.32
LINC02340-201ENST00000610335 NUBP1P53384 320 aa13.03□□□□□ -0.32
LINC02340-201ENST00000610335 ASTLQ6HA08 431 aaPredicted RBP13.03□□□□□ -0.32
LINC02340-201ENST00000610335 RASEFQ8IZ41 740 aa13.03□□□□□ -0.32
LINC02340-201ENST00000610335 ATMINO43313 823 aaPredicted RBP13.02□□□□□ -0.33
LINC02340-201ENST00000610335 KLHL34Q8N239 644 aa13□□□□□ -0.33
LINC02340-201ENST00000610335 TSPYL2Q9H2G4 693 aaPredicted RBP13□□□□□ -0.33
LINC02340-201ENST00000610335 SLC39A7Q92504 469 aa12.97□□□□□ -0.33
LINC02340-201ENST00000610335 CCDC61Q9Y6R9 512 aa12.97□□□□□ -0.33
LINC02340-201ENST00000610335 IFNLR1Q8IU57 520 aaPredicted RBP12.96□□□□□ -0.33
LINC02340-201ENST00000610335 FAM212AQ96EL1 285 aa12.96□□□□□ -0.33
LINC02340-201ENST00000610335 FAM163AQ96GL9 167 aaPredicted RBP12.96□□□□□ -0.33
LINC02340-201ENST00000610335 C7P10643 843 aa12.95□□□□□ -0.34
LINC02340-201ENST00000610335 PCDH10Q9P2E7 1040 aa12.94□□□□□ -0.34
LINC02340-201ENST00000610335 ATN1P54259 1190 aaPredicted RBP12.9□□□□□ -0.34
LINC02340-201ENST00000610335 SPOCK2Q92563 424 aa12.9□□□□□ -0.34
LINC02340-201ENST00000610335 MAMSTRQ6ZN01 415 aa12.87□□□□□ -0.35
LINC02340-201ENST00000610335 POTEFA5A3E0 1075 aa12.86□□□□□ -0.35
LINC02340-201ENST00000610335 KIF12Q96FN5 646 aa12.85□□□□□ -0.35
LINC02340-201ENST00000610335 SCUBE2Q9NQ36 999 aa12.84□□□□□ -0.35
LINC02340-201ENST00000610335 TRPC6Q9Y210 931 aa12.84□□□□□ -0.35
LINC02340-201ENST00000610335 GSE1Q14687 1217 aa12.83□□□□□ -0.36
LINC02340-201ENST00000610335 DCAF8Q5TAQ9 597 aa12.83□□□□□ -0.36
LINC02340-201ENST00000610335 BMP2KQ9NSY1 1161 aaPredicted RBP12.79□□□□□ -0.36
LINC02340-201ENST00000610335 MAP3K13O43283 966 aa12.78□□□□□ -0.36
LINC02340-201ENST00000610335 SGIP1Q9BQI5 828 aa12.78□□□□□ -0.36
LINC02340-201ENST00000610335 AMER1Q5JTC6 1135 aaPredicted RBP12.75□□□□□ -0.37
LINC02340-201ENST00000610335 PCDHB13Q9Y5F0 798 aa12.73□□□□□ -0.37
LINC02340-201ENST00000610335 PYGBP11216 843 aa12.71□□□□□ -0.37
LINC02340-201ENST00000610335 COLQQ9Y215 455 aaPredicted RBP12.71□□□□□ -0.37
LINC02340-201ENST00000610335 CDAN1Q8IWY9 1227 aa12.7□□□□□ -0.38
LINC02340-201ENST00000610335 CIZ1Q9ULV3 898 aaPredicted RBP12.7□□□□□ -0.38
LINC02340-201ENST00000610335 NISCHQ9Y2I1 1504 aa12.69□□□□□ -0.38
LINC02340-201ENST00000610335 CHRM1P11229 460 aaPredicted RBP12.68□□□□□ -0.38
LINC02340-201ENST00000610335 TIE1P35590 1138 aa12.66□□□□□ -0.38
LINC02340-201ENST00000610335 IFNL1Q8IU54 200 aa12.66□□□□□ -0.38
LINC02340-201ENST00000610335 TRIM41Q8WV44 630 aa12.66□□□□□ -0.38
LINC02340-201ENST00000610335 RTN4Q9NQC3 1192 aaKnown RBP12.63□□□□□ -0.39
LINC02340-201ENST00000610335 ZNF467Q7Z7K2 595 aaPredicted RBP12.62□□□□□ -0.39
LINC02340-201ENST00000610335 TTLL13PA6NNM8 815 aa12.61□□□□□ -0.39
LINC02340-201ENST00000610335 SEC24BO95487 1268 aa12.6□□□□□ -0.39
LINC02340-201ENST00000610335 PCDHB8Q9UN66 801 aa12.57□□□□□ -0.4
LINC02340-201ENST00000610335 ST18O60284 1047 aa12.54□□□□□ -0.4
LINC02340-201ENST00000610335 TRIM35Q9UPQ4 493 aa12.54□□□□□ -0.4
LINC02340-201ENST00000610335 TMEM106CQ9BVX2 250 aa12.52□□□□□ -0.41
LINC02340-201ENST00000610335 SLAIN1Q8ND83 568 aa12.51□□□□□ -0.41
LINC02340-201ENST00000610335 SLC24A1O60721 1099 aa12.48□□□□□ -0.41
LINC02340-201ENST00000610335 PDAP1Q13442 181 aaKnown RBP12.47□□□□□ -0.41
LINC02340-201ENST00000610335 IER5LQ5T953 404 aa12.45□□□□□ -0.42
LINC02340-201ENST00000610335 PSEN1P49768 467 aa12.44□□□□□ -0.42
LINC02340-201ENST00000610335 MMRN1Q13201 1228 aa12.44□□□□□ -0.42
LINC02340-201ENST00000610335 PKD2Q13563 968 aa12.43□□□□□ -0.42
LINC02340-201ENST00000610335 RIOK3O14730 519 aaKnown RBP12.42□□□□□ -0.42
LINC02340-201ENST00000610335 RNF25Q96BH1 459 aaPredicted RBP12.42□□□□□ -0.42
LINC02340-201ENST00000610335 ECM2O94769 699 aaPredicted RBP12.4□□□□□ -0.42
LINC02340-201ENST00000610335 SPNS2Q8IVW8 549 aa12.4□□□□□ -0.42
LINC02340-201ENST00000610335 VGFO15240 615 aaPredicted RBP12.36□□□□□ -0.43
LINC02340-201ENST00000610335 MARVELD3Q96A59 401 aa12.35□□□□□ -0.43
LINC02340-201ENST00000610335 PLCG2P16885 1265 aa12.34□□□□□ -0.43
LINC02340-201ENST00000610335 GOLGA2Q08379 1002 aa12.34□□□□□ -0.43
LINC02340-201ENST00000610335 TAOK2Q9UL54 1235 aa12.34□□□□□ -0.43
LINC02340-201ENST00000610335 IRX5P78411 483 aaPredicted RBP12.31□□□□□ -0.44
LINC02340-201ENST00000610335 MKRN3Q13064 507 aaKnown RBP12.3□□□□□ -0.44
LINC02340-201ENST00000610335 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.28□□□□□ -0.44
LINC02340-201ENST00000610335 RGL2O15211 777 aa12.28□□□□□ -0.44
LINC02340-201ENST00000610335 ZFP91Q96JP5 570 aaPredicted RBP12.28□□□□□ -0.44
LINC02340-201ENST00000610335 CABP2Q9NPB3 220 aa12.28□□□□□ -0.44
LINC02340-201ENST00000610335 OCEL1Q9H607 264 aa12.26□□□□□ -0.45
LINC02340-201ENST00000610335 TMEM121BQ9BXQ6 578 aaPredicted RBP12.24□□□□□ -0.45
LINC02340-201ENST00000610335 ILDR1Q86SU0 546 aaPredicted RBP12.21□□□□□ -0.45
LINC02340-201ENST00000610335 PDCD7Q8N8D1 485 aaKnown RBP12.21□□□□□ -0.45
LINC02340-201ENST00000610335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.2□□□□□ -0.46
LINC02340-201ENST00000610335 BCL11BQ9C0K0 894 aaPredicted RBP12.19□□□□□ -0.46
LINC02340-201ENST00000610335 EFCAB3Q8N7B9 438 aa12.18□□□□□ -0.46
LINC02340-201ENST00000610335 STK25O00506 426 aa12.17□□□□□ -0.46
LINC02340-201ENST00000610335 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.17□□□□□ -0.46
LINC02340-201ENST00000610335 POTEB3A0JP26 581 aa12.15□□□□□ -0.46
LINC02340-201ENST00000610335 POTEBQ6S5H4 581 aa12.15□□□□□ -0.46
LINC02340-201ENST00000610335 STK24Q9Y6E0 443 aa12.15□□□□□ -0.46
LINC02340-201ENST00000610335 SOX12O15370 315 aa12.14□□□□□ -0.47
LINC02340-201ENST00000610335 SNPHO15079 494 aa12.13□□□□□ -0.47
LINC02340-201ENST00000610335 KRTAP3-3Q9BYR6 98 aa12.12□□□□□ -0.47
LINC02340-201ENST00000610335 KRTAP3-2Q9BYR7 98 aa12.12□□□□□ -0.47
LINC02340-201ENST00000610335 EMP3P54852 163 aa12.11□□□□□ -0.47
LINC02340-201ENST00000610335 L3MBTL3Q96JM7 780 aaPredicted RBP12.1□□□□□ -0.47
LINC02340-201ENST00000610335 HS6ST3Q8IZP7 471 aa12.09□□□□□ -0.47
LINC02340-201ENST00000610335 HS3ST6Q96QI5 342 aa12.08□□□□□ -0.48
LINC02340-201ENST00000610335 FAM205CA6NFA0 338 aa12.06□□□□□ -0.48
LINC02340-201ENST00000610335 PHF8Q9UPP1 1060 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms