RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 TRIM52Q96A61 297 aa17.67■□□□□ 0.42
CTCFL-218ENST00000608440 BIVM-ERCC5R4GMW8 1640 aa17.67■□□□□ 0.42
CTCFL-218ENST00000608440 LAMC3Q9Y6N6 1575 aa17.65■□□□□ 0.42
CTCFL-218ENST00000608440 PAK3O75914 559 aaPredicted RBP17.64■□□□□ 0.41
CTCFL-218ENST00000608440 IRX6P78412 446 aaPredicted RBP17.64■□□□□ 0.41
CTCFL-218ENST00000608440 NOP58Q9Y2X3 529 aaKnown RBP17.63■□□□□ 0.41
CTCFL-218ENST00000608440 PLEKHG5O94827 1062 aa17.63■□□□□ 0.41
CTCFL-218ENST00000608440 RTL5Q5HYW3 569 aaPredicted RBP17.61■□□□□ 0.41
CTCFL-218ENST00000608440 EEA1Q15075 1411 aa17.59■□□□□ 0.41
CTCFL-218ENST00000608440 CEP164Q9UPV0 1460 aa17.57■□□□□ 0.4
CTCFL-218ENST00000608440 PDS5BQ9NTI5 1447 aa17.55■□□□□ 0.4
CTCFL-218ENST00000608440 FGD5Q6ZNL6 1462 aa17.52■□□□□ 0.4
CTCFL-218ENST00000608440 CEP162Q5TB80 1403 aa17.5■□□□□ 0.39
CTCFL-218ENST00000608440 DNMBPQ6XZF7 1577 aa17.5■□□□□ 0.39
CTCFL-218ENST00000608440 TOPBP1Q92547 1522 aa17.49■□□□□ 0.39
CTCFL-218ENST00000608440 KIF21AQ7Z4S6 1674 aa17.49■□□□□ 0.39
CTCFL-218ENST00000608440 SLC24A1O60721 1099 aa17.49■□□□□ 0.39
CTCFL-218ENST00000608440 URB2Q14146 1524 aaKnown RBP17.47■□□□□ 0.39
CTCFL-218ENST00000608440 DDX10Q13206 875 aaKnown RBP17.46■□□□□ 0.39
CTCFL-218ENST00000608440 TIMELESSQ9UNS1 1208 aa17.46■□□□□ 0.39
CTCFL-218ENST00000608440 PODXL2Q9NZ53 605 aa17.44■□□□□ 0.38
CTCFL-218ENST00000608440 KIF27Q86VH2 1401 aa17.44■□□□□ 0.38
CTCFL-218ENST00000608440 CUX2O14529 1486 aa17.43■□□□□ 0.38
CTCFL-218ENST00000608440 POLA1P09884 1462 aaPredicted RBP17.42■□□□□ 0.38
CTCFL-218ENST00000608440 GOLGA3Q08378 1498 aa17.42■□□□□ 0.38
CTCFL-218ENST00000608440 RAD54L2Q9Y4B4 1467 aa17.41■□□□□ 0.38
CTCFL-218ENST00000608440 UBTFP17480 764 aaKnown RBP17.41■□□□□ 0.38
CTCFL-218ENST00000608440 KIF21BO75037 1637 aa17.38■□□□□ 0.37
CTCFL-218ENST00000608440 RAPGEF2Q9Y4G8 1499 aa17.37■□□□□ 0.37
CTCFL-218ENST00000608440 BRPF3Q9ULD4 1205 aa17.36■□□□□ 0.37
CTCFL-218ENST00000608440 B4GALNT3Q6L9W6 998 aa17.35■□□□□ 0.37
CTCFL-218ENST00000608440 DHX57Q6P158 1386 aaKnown RBP17.34■□□□□ 0.37
CTCFL-218ENST00000608440 ZBTB47Q9UFB7 747 aaPredicted RBP17.34■□□□□ 0.37
CTCFL-218ENST00000608440 MRC2Q9UBG0 1479 aa17.34■□□□□ 0.37
CTCFL-218ENST00000608440 TNIKQ9UKE5 1360 aa17.34■□□□□ 0.37
CTCFL-218ENST00000608440 ERCC6Q03468 1493 aa17.33■□□□□ 0.37
CTCFL-218ENST00000608440 PRXQ9BXM0 1461 aa17.31■□□□□ 0.36
CTCFL-218ENST00000608440 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
CTCFL-218ENST00000608440 IPO9Q96P70 1041 aaKnown RBP17.3■□□□□ 0.36
CTCFL-218ENST00000608440 PPP4R2Q9NY27 417 aa17.3■□□□□ 0.36
CTCFL-218ENST00000608440 ANP32AP39687 249 aaKnown RBP17.29■□□□□ 0.36
CTCFL-218ENST00000608440 ZMYND15Q9H091 742 aa17.29■□□□□ 0.36
CTCFL-218ENST00000608440 VSIG10Q8N0Z9 540 aa17.28■□□□□ 0.36
CTCFL-218ENST00000608440 IGF1RP08069 1367 aa17.28■□□□□ 0.36
CTCFL-218ENST00000608440 NEFMP07197 916 aa17.26■□□□□ 0.35
CTCFL-218ENST00000608440 WASHC2AQ641Q2 1341 aa17.26■□□□□ 0.35
CTCFL-218ENST00000608440 LAS1LQ9Y4W2 734 aaKnown RBP17.26■□□□□ 0.35
CTCFL-218ENST00000608440 ERICH3Q5RHP9 1530 aa17.25■□□□□ 0.35
CTCFL-218ENST00000608440 HNRNPUQ00839 825 aaKnown RBP eCLIP17.25■□□□□ 0.35
CTCFL-218ENST00000608440 TDRD9Q8NDG6 1382 aaKnown RBP17.25■□□□□ 0.35
CTCFL-218ENST00000608440 C11orf95C9JLR9 678 aaPredicted RBP17.24■□□□□ 0.35
CTCFL-218ENST00000608440 ANP32CO43423 234 aa17.24■□□□□ 0.35
CTCFL-218ENST00000608440 RANGAP1P46060 587 aaPredicted RBP17.23■□□□□ 0.35
CTCFL-218ENST00000608440 HIRIP3Q9BW71 556 aaPredicted RBP17.23■□□□□ 0.35
CTCFL-218ENST00000608440 WDR97A6NE52 1622 aa17.23■□□□□ 0.35
CTCFL-218ENST00000608440 WDR62O43379 1518 aa17.23■□□□□ 0.35
CTCFL-218ENST00000608440 GLIPR1L2Q4G1C9 344 aa17.21■□□□□ 0.35
CTCFL-218ENST00000608440 CCER2I3L3R5 266 aa17.21■□□□□ 0.35
CTCFL-218ENST00000608440 DAXXQ9UER7 740 aaPredicted RBP17.21■□□□□ 0.35
CTCFL-218ENST00000608440 CARMIL1Q5VZK9 1371 aa17.2■□□□□ 0.34
CTCFL-218ENST00000608440 TARBP1Q13395 1621 aaKnown RBP17.2■□□□□ 0.34
CTCFL-218ENST00000608440 WASHC2CQ9Y4E1 1318 aa17.19■□□□□ 0.34
CTCFL-218ENST00000608440 THOC2Q8NI27 1593 aaKnown RBP17.18■□□□□ 0.34
CTCFL-218ENST00000608440 RSPH6AQ9H0K4 717 aa17.18■□□□□ 0.34
CTCFL-218ENST00000608440 PPP1R15AO75807 674 aaPredicted RBP17.17■□□□□ 0.34
CTCFL-218ENST00000608440 ABCA5Q8WWZ7 1642 aa17.17■□□□□ 0.34
CTCFL-218ENST00000608440 CLIP1P30622 1438 aa17.17■□□□□ 0.34
CTCFL-218ENST00000608440 GAPVD1Q14C86 1478 aa17.16■□□□□ 0.34
CTCFL-218ENST00000608440 NPM2Q86SE8 214 aaKnown RBP17.14■□□□□ 0.33
CTCFL-218ENST00000608440 AQRO60306 1485 aaKnown RBP eCLIP17.12■□□□□ 0.333e-6■■■□□ 17.1
CTCFL-218ENST00000608440 IFT140Q96RY7 1462 aa17.11■□□□□ 0.33
CTCFL-218ENST00000608440 ZNF608Q9ULD9 1512 aaPredicted RBP17.1■□□□□ 0.33
CTCFL-218ENST00000608440 CUL7Q14999 1698 aa17.09■□□□□ 0.33
CTCFL-218ENST00000608440 USP35Q9P2H5 1018 aa17.08■□□□□ 0.33
CTCFL-218ENST00000608440 SIN3AQ96ST3 1273 aa17.07■□□□□ 0.32
CTCFL-218ENST00000608440 GSE1Q14687 1217 aa17.06■□□□□ 0.32
CTCFL-218ENST00000608440 A0A0U1RQG5 324 aaPredicted RBP17.04■□□□□ 0.32
CTCFL-218ENST00000608440 PBRM1Q86U86 1689 aa17.03■□□□□ 0.32
CTCFL-218ENST00000608440 GRIN2BQ13224 1484 aa17.01■□□□□ 0.31
CTCFL-218ENST00000608440 EIF4G3O43432 1585 aaKnown RBP17■□□□□ 0.31
CTCFL-218ENST00000608440 FRAT1Q92837 279 aaPredicted RBP17■□□□□ 0.31
CTCFL-218ENST00000608440 VPS8Q8N3P4 1428 aa16.99■□□□□ 0.31
CTCFL-218ENST00000608440 ARAP1Q96P48 1450 aa16.99■□□□□ 0.31
CTCFL-218ENST00000608440 ADAMTS12P58397 1594 aa16.97■□□□□ 0.31
CTCFL-218ENST00000608440 ARHGAP35Q9NRY4 1499 aa16.97■□□□□ 0.31
CTCFL-218ENST00000608440 PPM1GO15355 546 aaPredicted RBP16.97■□□□□ 0.31
CTCFL-218ENST00000608440 FAM43AQ8N2R8 423 aa16.96■□□□□ 0.31
CTCFL-218ENST00000608440 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.31
CTCFL-218ENST00000608440 SNAPC4Q5SXM2 1469 aa16.95■□□□□ 0.3
CTCFL-218ENST00000608440 HSP90AA2PQ14568 343 aaPredicted RBP16.91■□□□□ 0.3
CTCFL-218ENST00000608440 CTTNBP2Q8WZ74 1663 aa16.91■□□□□ 0.3
CTCFL-218ENST00000608440 P3H3Q8IVL6 736 aa16.9■□□□□ 0.3
CTCFL-218ENST00000608440 DCAF11Q8TEB1 546 aa16.9■□□□□ 0.3
CTCFL-218ENST00000608440 NFKBIBQ15653 356 aa16.87■□□□□ 0.29
CTCFL-218ENST00000608440 RBM10P98175 930 aaKnown RBP16.86■□□□□ 0.29
CTCFL-218ENST00000608440 FAM9BQ8IZU0 186 aa16.85■□□□□ 0.29
CTCFL-218ENST00000608440 FHOD3Q2V2M9 1422 aa16.85■□□□□ 0.29
CTCFL-218ENST00000608440 MAGI1Q96QZ7 1491 aaPredicted RBP16.85■□□□□ 0.29
CTCFL-218ENST00000608440 NAP1L5Q96NT1 182 aaPredicted RBP16.84■□□□□ 0.29
CTCFL-218ENST00000608440 FBLN2P98095 1184 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms