RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 FBXO3Q9UK99 471 aa17.12■□□□□ 0.33
LINC00458-206ENST00000607494 NUBP1P53384 320 aa17.1■□□□□ 0.33
LINC00458-206ENST00000607494 LHX8Q68G74 356 aa17.08■□□□□ 0.32
LINC00458-206ENST00000607494 KIF12Q96FN5 646 aa17.06■□□□□ 0.32
LINC00458-206ENST00000607494 ZBTB47Q9UFB7 747 aaPredicted RBP17.06■□□□□ 0.32
LINC00458-206ENST00000607494 VASPP50552 380 aaPredicted RBP17.03■□□□□ 0.32
LINC00458-206ENST00000607494 MAP3K13O43283 966 aa17.01■□□□□ 0.31
LINC00458-206ENST00000607494 PELP1Q8IZL8 1130 aaKnown RBP17.01■□□□□ 0.31
LINC00458-206ENST00000607494 TRPC6Q9Y210 931 aa17■□□□□ 0.31
LINC00458-206ENST00000607494 ATMINO43313 823 aaPredicted RBP16.92■□□□□ 0.3
LINC00458-206ENST00000607494 ASTLQ6HA08 431 aaPredicted RBP16.92■□□□□ 0.3
LINC00458-206ENST00000607494 FAM212AQ96EL1 285 aa16.92■□□□□ 0.3
LINC00458-206ENST00000607494 KLHL34Q8N239 644 aa16.88■□□□□ 0.29
LINC00458-206ENST00000607494 ATN1P54259 1190 aaPredicted RBP16.86■□□□□ 0.29
LINC00458-206ENST00000607494 BMP2KQ9NSY1 1161 aaPredicted RBP16.86■□□□□ 0.29
LINC00458-206ENST00000607494 PCDHB13Q9Y5F0 798 aa16.85■□□□□ 0.29
LINC00458-206ENST00000607494 POTEB2H3BUK9 544 aa16.84■□□□□ 0.29
LINC00458-206ENST00000607494 DCAF8Q5TAQ9 597 aa16.84■□□□□ 0.29
LINC00458-206ENST00000607494 METRNQ9UJH8 293 aa16.81■□□□□ 0.28
LINC00458-206ENST00000607494 PYGBP11216 843 aa16.79■□□□□ 0.28
LINC00458-206ENST00000607494 IFNL1Q8IU54 200 aa16.79■□□□□ 0.28
LINC00458-206ENST00000607494 IFNLR1Q8IU57 520 aaPredicted RBP16.78■□□□□ 0.28
LINC00458-206ENST00000607494 TIE1P35590 1138 aa16.76■□□□□ 0.27
LINC00458-206ENST00000607494 TTLL13PA6NNM8 815 aa16.74■□□□□ 0.27
LINC00458-206ENST00000607494 SLC39A7Q92504 469 aa16.74■□□□□ 0.27
LINC00458-206ENST00000607494 SGIP1Q9BQI5 828 aa16.73■□□□□ 0.27
LINC00458-206ENST00000607494 C7P10643 843 aa16.69■□□□□ 0.26
LINC00458-206ENST00000607494 OTUD5Q96G74 571 aa16.67■□□□□ 0.26
LINC00458-206ENST00000607494 POTEFA5A3E0 1075 aa16.65■□□□□ 0.26
LINC00458-206ENST00000607494 POTEJP0CG39 1038 aa16.64■□□□□ 0.25
LINC00458-206ENST00000607494 PCDHB8Q9UN66 801 aa16.64■□□□□ 0.25
LINC00458-206ENST00000607494 TRIM35Q9UPQ4 493 aa16.64■□□□□ 0.25
LINC00458-206ENST00000607494 SPOCK2Q92563 424 aa16.62■□□□□ 0.25
LINC00458-206ENST00000607494 TMEM106CQ9BVX2 250 aa16.62■□□□□ 0.25
LINC00458-206ENST00000607494 GSE1Q14687 1217 aa16.61■□□□□ 0.25
LINC00458-206ENST00000607494 COLQQ9Y215 455 aaPredicted RBP16.58■□□□□ 0.24
LINC00458-206ENST00000607494 CIZ1Q9ULV3 898 aaPredicted RBP16.54■□□□□ 0.24
LINC00458-206ENST00000607494 SEC24BO95487 1268 aa16.48■□□□□ 0.23
LINC00458-206ENST00000607494 CHRM1P11229 460 aaPredicted RBP16.44■□□□□ 0.22
LINC00458-206ENST00000607494 IER5LQ5T953 404 aa16.44■□□□□ 0.22
LINC00458-206ENST00000607494 ZNF467Q7Z7K2 595 aaPredicted RBP16.43■□□□□ 0.22
LINC00458-206ENST00000607494 IRX5P78411 483 aaPredicted RBP16.37■□□□□ 0.21
LINC00458-206ENST00000607494 SCUBE2Q9NQ36 999 aa16.36■□□□□ 0.21
LINC00458-206ENST00000607494 PSEN1P49768 467 aa16.35■□□□□ 0.21
LINC00458-206ENST00000607494 MAMSTRQ6ZN01 415 aa16.35■□□□□ 0.21
LINC00458-206ENST00000607494 PLCG2P16885 1265 aa16.34■□□□□ 0.21
LINC00458-206ENST00000607494 PDAP1Q13442 181 aaKnown RBP16.26■□□□□ 0.19
LINC00458-206ENST00000607494 OCEL1Q9H607 264 aa16.25■□□□□ 0.19
LINC00458-206ENST00000607494 GOLGA2Q08379 1002 aa16.22■□□□□ 0.19
LINC00458-206ENST00000607494 MKRN3Q13064 507 aaKnown RBP16.2■□□□□ 0.18
LINC00458-206ENST00000607494 PDCD7Q8N8D1 485 aaKnown RBP16.19■□□□□ 0.18
LINC00458-206ENST00000607494 RNF25Q96BH1 459 aaPredicted RBP16.19■□□□□ 0.18
LINC00458-206ENST00000607494 CABP2Q9NPB3 220 aa16.18■□□□□ 0.18
LINC00458-206ENST00000607494 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
LINC00458-206ENST00000607494 LCE2DQ5TA82 110 aaPredicted RBP16.15■□□□□ 0.18
LINC00458-206ENST00000607494 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.13■□□□□ 0.17
LINC00458-206ENST00000607494 SLAIN1Q8ND83 568 aa16.12■□□□□ 0.17
LINC00458-206ENST00000607494 FAM163AQ96GL9 167 aaPredicted RBP16.11■□□□□ 0.17
LINC00458-206ENST00000607494 POTEMA6NI47 508 aa16.09■□□□□ 0.17
LINC00458-206ENST00000607494 DPY19L2Q6NUT2 758 aa16.07■□□□□ 0.16
LINC00458-206ENST00000607494 RIOK3O14730 519 aaKnown RBP16.06■□□□□ 0.16
LINC00458-206ENST00000607494 POTEGQ6S5H5 508 aa16.06■□□□□ 0.16
LINC00458-206ENST00000607494 ILDR1Q86SU0 546 aaPredicted RBP16.03■□□□□ 0.16
LINC00458-206ENST00000607494 EFCAB3Q8N7B9 438 aa16.03■□□□□ 0.16
LINC00458-206ENST00000607494 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.02■□□□□ 0.16
LINC00458-206ENST00000607494 ZFP91Q96JP5 570 aaPredicted RBP16.02■□□□□ 0.16
LINC00458-206ENST00000607494 PLSCR2Q9NRY7 297 aa16■□□□□ 0.15
LINC00458-206ENST00000607494 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.99■□□□□ 0.15
LINC00458-206ENST00000607494 VGFO15240 615 aaPredicted RBP15.96■□□□□ 0.15
LINC00458-206ENST00000607494 C3orf67Q6ZVT6 689 aa15.95■□□□□ 0.14
LINC00458-206ENST00000607494 L3MBTL3Q96JM7 780 aaPredicted RBP15.95■□□□□ 0.14
LINC00458-206ENST00000607494 ECM2O94769 699 aaPredicted RBP15.93■□□□□ 0.14
LINC00458-206ENST00000607494 PKD2Q13563 968 aa15.93■□□□□ 0.14
LINC00458-206ENST00000607494 ST18O60284 1047 aa15.88■□□□□ 0.13
LINC00458-206ENST00000607494 PCDH10Q9P2E7 1040 aa15.87■□□□□ 0.13
LINC00458-206ENST00000607494 BOLA1Q9Y3E2 137 aa15.87■□□□□ 0.13
LINC00458-206ENST00000607494 RGL2O15211 777 aa15.86■□□□□ 0.13
LINC00458-206ENST00000607494 BCL11BQ9C0K0 894 aaPredicted RBP15.84■□□□□ 0.13
LINC00458-206ENST00000607494 PHF8Q9UPP1 1060 aa15.84■□□□□ 0.13
LINC00458-206ENST00000607494 MS4A4AQ96JQ5 239 aa15.83■□□□□ 0.12
LINC00458-206ENST00000607494 STK24Q9Y6E0 443 aa15.81■□□□□ 0.12
LINC00458-206ENST00000607494 G3V3G9 751 aa15.8■□□□□ 0.12
LINC00458-206ENST00000607494 STK25O00506 426 aa15.77■□□□□ 0.12
LINC00458-206ENST00000607494 SOX12O15370 315 aa15.77■□□□□ 0.12
LINC00458-206ENST00000607494 TMEM121BQ9BXQ6 578 aaPredicted RBP15.74■□□□□ 0.11
LINC00458-206ENST00000607494 MICALL2Q8IY33 904 aa15.73■□□□□ 0.11
LINC00458-206ENST00000607494 SNPHO15079 494 aa15.72■□□□□ 0.11
LINC00458-206ENST00000607494 TAOK2Q9UL54 1235 aa15.72■□□□□ 0.11
LINC00458-206ENST00000607494 MARVELD3Q96A59 401 aa15.71■□□□□ 0.11
LINC00458-206ENST00000607494 FBXO22Q8NEZ5 403 aa15.69■□□□□ 0.1
LINC00458-206ENST00000607494 TMEM92Q6UXU6 159 aa15.68■□□□□ 0.1
LINC00458-206ENST00000607494 MFRPQ9BY79 579 aa15.68■□□□□ 0.1
LINC00458-206ENST00000607494 NLRP6P59044 892 aa15.64■□□□□ 0.09
LINC00458-206ENST00000607494 CDAN1Q8IWY9 1227 aa15.64■□□□□ 0.09
LINC00458-206ENST00000607494 HOXB3P14651 431 aaPredicted RBP15.62■□□□□ 0.09
LINC00458-206ENST00000607494 EMP3P54852 163 aa15.54■□□□□ 0.08
LINC00458-206ENST00000607494 POTEB3A0JP26 581 aa15.5■□□□□ 0.07
LINC00458-206ENST00000607494 POTEBQ6S5H4 581 aa15.5■□□□□ 0.07
LINC00458-206ENST00000607494 FAM205CA6NFA0 338 aa15.47■□□□□ 0.07
LINC00458-206ENST00000607494 PPP1R37O75864 691 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms