RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 SLC4A2P04920 1241 aa10.64□□□□□ -0.71
TUBE1-207ENST00000604689 VASPP50552 380 aaPredicted RBP10.63□□□□□ -0.71
TUBE1-207ENST00000604689 ZEB1P37275 1124 aaPredicted RBP10.59□□□□□ -0.71
TUBE1-207ENST00000604689 ANP32EQ9BTT0 268 aa10.59□□□□□ -0.71
TUBE1-207ENST00000604689 ATF5Q9Y2D1 282 aaPredicted RBP10.54□□□□□ -0.72
TUBE1-207ENST00000604689 IGSF3O75054 1194 aa10.54□□□□□ -0.72
TUBE1-207ENST00000604689 RGL2O15211 777 aa10.53□□□□□ -0.72
TUBE1-207ENST00000604689 ECM2O94769 699 aaPredicted RBP10.53□□□□□ -0.72
TUBE1-207ENST00000604689 BRPF1P55201 1214 aaPredicted RBP10.53□□□□□ -0.72
TUBE1-207ENST00000604689 ARID3CA6NKF2 412 aa10.51□□□□□ -0.73
TUBE1-207ENST00000604689 IRX6P78412 446 aaPredicted RBP10.51□□□□□ -0.73
TUBE1-207ENST00000604689 NEUROD1Q13562 356 aa10.5□□□□□ -0.73
TUBE1-207ENST00000604689 CHGAP10645 457 aaKnown RBP10.49□□□□□ -0.73
TUBE1-207ENST00000604689 MAPK8IP2Q13387 824 aaPredicted RBP10.49□□□□□ -0.73
TUBE1-207ENST00000604689 TAF7LQ5H9L4 462 aa10.46□□□□□ -0.73
TUBE1-207ENST00000604689 CDK11BP21127 795 aaKnown RBP10.46□□□□□ -0.73
TUBE1-207ENST00000604689 NECTIN2Q92692 538 aa10.46□□□□□ -0.73
TUBE1-207ENST00000604689 CDK11AQ9UQ88 783 aaPredicted RBP10.46□□□□□ -0.73
TUBE1-207ENST00000604689 SALL2Q9Y467 1007 aaPredicted RBP10.46□□□□□ -0.74
TUBE1-207ENST00000604689 SMARCA2P51531 1590 aa10.45□□□□□ -0.74
TUBE1-207ENST00000604689 NEUROD2Q15784 382 aa10.45□□□□□ -0.74
TUBE1-207ENST00000604689 C1orf115Q9H7X2 142 aa10.45□□□□□ -0.74
TUBE1-207ENST00000604689 ZNF428Q96B54 188 aa10.42□□□□□ -0.74
TUBE1-207ENST00000604689 CCDC9Q9Y3X0 531 aaKnown RBP10.41□□□□□ -0.74
TUBE1-207ENST00000604689 ACIN1Q9UKV3 1341 aaKnown RBP10.39□□□□□ -0.75
TUBE1-207ENST00000604689 MYCNP04198 464 aaPredicted RBP10.38□□□□□ -0.75
TUBE1-207ENST00000604689 BRD2P25440 801 aaKnown RBP10.38□□□□□ -0.75
TUBE1-207ENST00000604689 ATXN8OSP0DMR3 200 aa10.38□□□□□ -0.75
TUBE1-207ENST00000604689 MYT1LQ9UL68 1186 aa10.38□□□□□ -0.75
TUBE1-207ENST00000604689 FGD1P98174 961 aa10.36□□□□□ -0.75
TUBE1-207ENST00000604689 DEKP35659 375 aaKnown RBP10.35□□□□□ -0.75
TUBE1-207ENST00000604689 SAMD1Q6SPF0 538 aaPredicted RBP10.35□□□□□ -0.75
TUBE1-207ENST00000604689 TRIM41Q8WV44 630 aa10.33□□□□□ -0.76
TUBE1-207ENST00000604689 NAP1L5Q96NT1 182 aaPredicted RBP10.33□□□□□ -0.76
TUBE1-207ENST00000604689 CLSPNQ9HAW4 1339 aa10.33□□□□□ -0.76
TUBE1-207ENST00000604689 ZBTB7CA1YPR0 619 aa10.32□□□□□ -0.76
TUBE1-207ENST00000604689 GLIPR1L2Q4G1C9 344 aa10.31□□□□□ -0.76
TUBE1-207ENST00000604689 SPDYE4A6NLX3 237 aa10.3□□□□□ -0.76
TUBE1-207ENST00000604689 YTHDC1Q96MU7 727 aaKnown RBP10.29□□□□□ -0.76
TUBE1-207ENST00000604689 HMGXB3Q12766 1538 aa10.29□□□□□ -0.76
TUBE1-207ENST00000604689 DNAJC5Q9H3Z4 198 aa10.29□□□□□ -0.76
TUBE1-207ENST00000604689 LMOD2Q6P5Q4 547 aa10.27□□□□□ -0.77
TUBE1-207ENST00000604689 ABCC9O60706 1549 aa10.26□□□□□ -0.77
TUBE1-207ENST00000604689 APBB1O00213 710 aa10.26□□□□□ -0.77
TUBE1-207ENST00000604689 ZMYND15Q9H091 742 aa10.25□□□□□ -0.77
TUBE1-207ENST00000604689 EIF4G1Q04637 1599 aaKnown RBP10.24□□□□□ -0.77
TUBE1-207ENST00000604689 FOXD4L5Q5VV16 416 aaPredicted RBP10.24□□□□□ -0.77
TUBE1-207ENST00000604689 FOXD4L4Q8WXT5 416 aaPredicted RBP10.24□□□□□ -0.77
TUBE1-207ENST00000604689 RSPH6AQ9H0K4 717 aa10.24□□□□□ -0.77
TUBE1-207ENST00000604689 RAD21O60216 631 aa10.23□□□□□ -0.77
TUBE1-207ENST00000604689 SLC24A3Q9HC58 644 aa10.23□□□□□ -0.77
TUBE1-207ENST00000604689 KCTD17Q8N5Z5 321 aa10.23□□□□□ -0.77
TUBE1-207ENST00000604689 RBM10P98175 930 aaKnown RBP10.21□□□□□ -0.77
TUBE1-207ENST00000604689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.21□□□□□ -0.78
TUBE1-207ENST00000604689 RBM25P49756 843 aaKnown RBP10.19□□□□□ -0.78
TUBE1-207ENST00000604689 WDR97A6NE52 1622 aa10.19□□□□□ -0.78
TUBE1-207ENST00000604689 AEBP1Q8IUX7 1158 aa10.18□□□□□ -0.78
TUBE1-207ENST00000604689 MTMR7Q9Y216 660 aa10.15□□□□□ -0.78
TUBE1-207ENST00000604689 AAMPQ13685 434 aa10.15□□□□□ -0.78
TUBE1-207ENST00000604689 DIEXFQ68CQ4 756 aaKnown RBP10.15□□□□□ -0.78
TUBE1-207ENST00000604689 GPBP1L1Q9HC44 474 aaPredicted RBP10.15□□□□□ -0.79
TUBE1-207ENST00000604689 ZNF326Q5BKZ1 582 aaKnown RBP10.14□□□□□ -0.79
TUBE1-207ENST00000604689 IL27Q8NEV9 243 aa10.14□□□□□ -0.79
TUBE1-207ENST00000604689 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.13□□□□□ -0.79
TUBE1-207ENST00000604689 ZNF526Q8TF50 670 aaPredicted RBP10.12□□□□□ -0.79
TUBE1-207ENST00000604689 RNF216Q9NWF9 866 aaPredicted RBP10.11□□□□□ -0.79
TUBE1-207ENST00000604689 DNAJC5BQ9UF47 199 aa10.11□□□□□ -0.79
TUBE1-207ENST00000604689 NKX1-1Q15270 411 aaPredicted RBP10.1□□□□□ -0.79
TUBE1-207ENST00000604689 CCER1Q8TC90 406 aaPredicted RBP10.09□□□□□ -0.79
TUBE1-207ENST00000604689 PRDM10Q9NQV6 1147 aa10.09□□□□□ -0.79
TUBE1-207ENST00000604689 CIZ1Q9ULV3 898 aaPredicted RBP10.09□□□□□ -0.79
TUBE1-207ENST00000604689 HSP90B1P14625 803 aaKnown RBP10.08□□□□□ -0.8
TUBE1-207ENST00000604689 SPOCK2Q92563 424 aa10.08□□□□□ -0.8
TUBE1-207ENST00000604689 SMARCA4P51532 1647 aa10.06□□□□□ -0.8
TUBE1-207ENST00000604689 CCDC82Q8N4S0 544 aa10.06□□□□□ -0.8
TUBE1-207ENST00000604689 USP35Q9P2H5 1018 aa10.05□□□□□ -0.8
TUBE1-207ENST00000604689 MKRN3Q13064 507 aaKnown RBP10.03□□□□□ -0.8
TUBE1-207ENST00000604689 KCNV2Q8TDN2 545 aa10.03□□□□□ -0.8
TUBE1-207ENST00000604689 ZC3H15Q8WU90 426 aaKnown RBP10.02□□□□□ -0.8
TUBE1-207ENST00000604689 BAZ1AQ9NRL2 1556 aaPredicted RBP10□□□□□ -0.81
TUBE1-207ENST00000604689 ERICH6BQ5W0A0 696 aa9.99□□□□□ -0.81
TUBE1-207ENST00000604689 CHMP4BQ9H444 224 aaKnown RBP9.99□□□□□ -0.81
TUBE1-207ENST00000604689 MKRN4PQ13434 485 aaPredicted RBP9.98□□□□□ -0.81
TUBE1-207ENST00000604689 NAP1L2Q9ULW6 460 aaPredicted RBP9.98□□□□□ -0.81
TUBE1-207ENST00000604689 BRPF3Q9ULD4 1205 aa9.98□□□□□ -0.81
TUBE1-207ENST00000604689 GTPBP6O43824 516 aaPredicted RBP9.96□□□□□ -0.81
TUBE1-207ENST00000604689 RGS22Q8NE09 1264 aa9.95□□□□□ -0.82
TUBE1-207ENST00000604689 PROM2Q8N271 834 aa9.95□□□□□ -0.82
TUBE1-207ENST00000604689 WDR70Q9NW82 654 aa9.95□□□□□ -0.82
TUBE1-207ENST00000604689 SCRIBQ14160 1630 aa9.95□□□□□ -0.82
TUBE1-207ENST00000604689 MIER1Q8N108 512 aa9.94□□□□□ -0.82
TUBE1-207ENST00000604689 CNPY4Q8N129 248 aa9.94□□□□□ -0.82
TUBE1-207ENST00000604689 ZNF592Q92610 1267 aa9.94□□□□□ -0.82
TUBE1-207ENST00000604689 RNF25Q96BH1 459 aaPredicted RBP9.93□□□□□ -0.82
TUBE1-207ENST00000604689 RTL5Q5HYW3 569 aaPredicted RBP9.93□□□□□ -0.82
TUBE1-207ENST00000604689 THOC2Q8NI27 1593 aaKnown RBP9.93□□□□□ -0.82
TUBE1-207ENST00000604689 GZF1Q9H116 711 aaPredicted RBP9.92□□□□□ -0.82
TUBE1-207ENST00000604689 MFAP1P55081 439 aaKnown RBP9.91□□□□□ -0.82
TUBE1-207ENST00000604689 WWC1Q8IX03 1113 aa9.91□□□□□ -0.82
TUBE1-207ENST00000604689 CLUAP1Q96AJ1 413 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms