RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 POTEGQ6S5H5 508 aa10.12□□□□□ -0.79
SGMS1-207ENST00000602619 METRNQ9UJH8 293 aa10.12□□□□□ -0.79
SGMS1-207ENST00000602619 EHMT2Q96KQ7 1210 aa10.1□□□□□ -0.79
SGMS1-207ENST00000602619 C7P10643 843 aa10.09□□□□□ -0.79
SGMS1-207ENST00000602619 SLC39A7Q92504 469 aa10.09□□□□□ -0.79
SGMS1-207ENST00000602619 TSPYL2Q9H2G4 693 aaPredicted RBP10.06□□□□□ -0.8
SGMS1-207ENST00000602619 ATN1P54259 1190 aaPredicted RBP10.03□□□□□ -0.8
SGMS1-207ENST00000602619 CCDC61Q9Y6R9 512 aa10.03□□□□□ -0.8
SGMS1-207ENST00000602619 PROM2Q8N271 834 aa10.01□□□□□ -0.81
SGMS1-207ENST00000602619 MAMSTRQ6ZN01 415 aa10□□□□□ -0.81
SGMS1-207ENST00000602619 KIF12Q96FN5 646 aa10□□□□□ -0.81
SGMS1-207ENST00000602619 LCE2DQ5TA82 110 aaPredicted RBP9.99□□□□□ -0.81
SGMS1-207ENST00000602619 PCDH10Q9P2E7 1040 aa9.98□□□□□ -0.81
SGMS1-207ENST00000602619 POTEFA5A3E0 1075 aa9.97□□□□□ -0.81
SGMS1-207ENST00000602619 TRPC6Q9Y210 931 aa9.97□□□□□ -0.81
SGMS1-207ENST00000602619 FAM163AQ96GL9 167 aaPredicted RBP9.96□□□□□ -0.82
SGMS1-207ENST00000602619 BMP2KQ9NSY1 1161 aaPredicted RBP9.95□□□□□ -0.82
SGMS1-207ENST00000602619 SCUBE2Q9NQ36 999 aa9.94□□□□□ -0.82
SGMS1-207ENST00000602619 MAP3K13O43283 966 aa9.92□□□□□ -0.82
SGMS1-207ENST00000602619 RASEFQ8IZ41 740 aa9.9□□□□□ -0.82
SGMS1-207ENST00000602619 TIE1P35590 1138 aa9.88□□□□□ -0.83
SGMS1-207ENST00000602619 MIER1Q8N108 512 aa9.88□□□□□ -0.83
SGMS1-207ENST00000602619 COLQQ9Y215 455 aaPredicted RBP9.86□□□□□ -0.83
SGMS1-207ENST00000602619 TTLL13PA6NNM8 815 aa9.85□□□□□ -0.83
SGMS1-207ENST00000602619 PLEKHG5O94827 1062 aa9.83□□□□□ -0.84
SGMS1-207ENST00000602619 SEC24BO95487 1268 aa9.81□□□□□ -0.84
SGMS1-207ENST00000602619 TRIM35Q9UPQ4 493 aa9.78□□□□□ -0.84
SGMS1-207ENST00000602619 SGIP1Q9BQI5 828 aa9.76□□□□□ -0.85
SGMS1-207ENST00000602619 PCDHB13Q9Y5F0 798 aa9.75□□□□□ -0.85
SGMS1-207ENST00000602619 IER5LQ5T953 404 aa9.74□□□□□ -0.85
SGMS1-207ENST00000602619 CDAN1Q8IWY9 1227 aa9.74□□□□□ -0.85
SGMS1-207ENST00000602619 NUBP1P53384 320 aa9.73□□□□□ -0.85
SGMS1-207ENST00000602619 PLCD3Q8N3E9 789 aa9.73□□□□□ -0.85
SGMS1-207ENST00000602619 IFNL1Q8IU54 200 aa9.71□□□□□ -0.86
SGMS1-207ENST00000602619 SLAIN1Q8ND83 568 aa9.69□□□□□ -0.86
SGMS1-207ENST00000602619 ST18O60284 1047 aa9.68□□□□□ -0.86
SGMS1-207ENST00000602619 TMEM106CQ9BVX2 250 aa9.67□□□□□ -0.86
SGMS1-207ENST00000602619 ZBTB47Q9UFB7 747 aaPredicted RBP9.65□□□□□ -0.86
SGMS1-207ENST00000602619 IRX5P78411 483 aaPredicted RBP9.63□□□□□ -0.87
SGMS1-207ENST00000602619 PLCG2P16885 1265 aa9.62□□□□□ -0.87
SGMS1-207ENST00000602619 FAM212AQ96EL1 285 aa9.61□□□□□ -0.87
SGMS1-207ENST00000602619 OCEL1Q9H607 264 aa9.57□□□□□ -0.88
SGMS1-207ENST00000602619 PYGBP11216 843 aa9.54□□□□□ -0.88
SGMS1-207ENST00000602619 DCAF8Q5TAQ9 597 aa9.53□□□□□ -0.88
SGMS1-207ENST00000602619 MMRN1Q13201 1228 aa9.51□□□□□ -0.89
SGMS1-207ENST00000602619 SPNS2Q8IVW8 549 aa9.51□□□□□ -0.89
SGMS1-207ENST00000602619 TMEM121BQ9BXQ6 578 aaPredicted RBP9.51□□□□□ -0.89
SGMS1-207ENST00000602619 PCDHB8Q9UN66 801 aa9.51□□□□□ -0.89
SGMS1-207ENST00000602619 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.5□□□□□ -0.89
SGMS1-207ENST00000602619 MARVELD3Q96A59 401 aa9.49□□□□□ -0.89
SGMS1-207ENST00000602619 SNPHO15079 494 aa9.48□□□□□ -0.89
SGMS1-207ENST00000602619 FKBP8Q14318 412 aa9.46□□□□□ -0.9
SGMS1-207ENST00000602619 PDCD7Q8N8D1 485 aaKnown RBP9.43□□□□□ -0.9
SGMS1-207ENST00000602619 POTEB3A0JP26 581 aa9.37□□□□□ -0.91
SGMS1-207ENST00000602619 POTEBQ6S5H4 581 aa9.37□□□□□ -0.91
SGMS1-207ENST00000602619 L3MBTL3Q96JM7 780 aaPredicted RBP9.37□□□□□ -0.91
SGMS1-207ENST00000602619 MKRN3Q13064 507 aaKnown RBP9.36□□□□□ -0.91
SGMS1-207ENST00000602619 C3orf67Q6ZVT6 689 aa9.36□□□□□ -0.91
SGMS1-207ENST00000602619 EMP3P54852 163 aa9.35□□□□□ -0.91
SGMS1-207ENST00000602619 ZNF467Q7Z7K2 595 aaPredicted RBP9.35□□□□□ -0.91
SGMS1-207ENST00000602619 GOLGA2Q08379 1002 aa9.34□□□□□ -0.91
SGMS1-207ENST00000602619 FBXO3Q9UK99 471 aa9.34□□□□□ -0.91
SGMS1-207ENST00000602619 GSE1Q14687 1217 aa9.33□□□□□ -0.92
SGMS1-207ENST00000602619 KRTAP3-3Q9BYR6 98 aa9.33□□□□□ -0.92
SGMS1-207ENST00000602619 KRTAP3-2Q9BYR7 98 aa9.33□□□□□ -0.92
SGMS1-207ENST00000602619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.33□□□□□ -0.92
SGMS1-207ENST00000602619 CHRM1P11229 460 aaPredicted RBP9.32□□□□□ -0.92
SGMS1-207ENST00000602619 HS3ST6Q96QI5 342 aa9.32□□□□□ -0.92
SGMS1-207ENST00000602619 FAM205CA6NFA0 338 aa9.31□□□□□ -0.92
SGMS1-207ENST00000602619 PSEN1P49768 467 aa9.31□□□□□ -0.92
SGMS1-207ENST00000602619 ILDR1Q86SU0 546 aaPredicted RBP9.3□□□□□ -0.92
SGMS1-207ENST00000602619 KLHL34Q8N239 644 aa9.3□□□□□ -0.92
SGMS1-207ENST00000602619 DPY19L2Q6NUT2 758 aa9.29□□□□□ -0.92
SGMS1-207ENST00000602619 VASPP50552 380 aaPredicted RBP9.25□□□□□ -0.93
SGMS1-207ENST00000602619 HOXB3P14651 431 aaPredicted RBP9.23□□□□□ -0.93
SGMS1-207ENST00000602619 PDAP1Q13442 181 aaKnown RBP9.22□□□□□ -0.93
SGMS1-207ENST00000602619 BOLA1Q9Y3E2 137 aa9.21□□□□□ -0.94
SGMS1-207ENST00000602619 CABP2Q9NPB3 220 aa9.2□□□□□ -0.94
SGMS1-207ENST00000602619 HOXB1P14653 301 aaPredicted RBP9.17□□□□□ -0.94
SGMS1-207ENST00000602619 G3V3G9 751 aa9.15□□□□□ -0.94
SGMS1-207ENST00000602619 ZNF710Q8N1W2 664 aa9.14□□□□□ -0.95
SGMS1-207ENST00000602619 ERBB3P21860 1342 aa9.13□□□□□ -0.95
SGMS1-207ENST00000602619 CIZ1Q9ULV3 898 aaPredicted RBP9.12□□□□□ -0.95
SGMS1-207ENST00000602619 DOK7Q18PE1 504 aa9.11□□□□□ -0.95
SGMS1-207ENST00000602619 IFNLR1Q8IU57 520 aaPredicted RBP9.11□□□□□ -0.95
SGMS1-207ENST00000602619 SPOCK2Q92563 424 aa9.1□□□□□ -0.95
SGMS1-207ENST00000602619 VARS2Q5ST30 1063 aaKnown RBP9.07□□□□□ -0.96
SGMS1-207ENST00000602619 EFCAB3Q8N7B9 438 aa9.07□□□□□ -0.96
SGMS1-207ENST00000602619 RNF166Q96A37 237 aaPredicted RBP9.06□□□□□ -0.96
SGMS1-207ENST00000602619 TMEM92Q6UXU6 159 aa9.05□□□□□ -0.96
SGMS1-207ENST00000602619 RIMBP2O15034 1052 aa9.03□□□□□ -0.96
SGMS1-207ENST00000602619 ZNF687Q8N1G0 1237 aa9.02□□□□□ -0.97
SGMS1-207ENST00000602619 GPR153Q6NV75 609 aa9.01□□□□□ -0.97
SGMS1-207ENST00000602619 MICALL2Q8IY33 904 aa9.01□□□□□ -0.97
SGMS1-207ENST00000602619 MYT1LQ9UL68 1186 aa9.01□□□□□ -0.97
SGMS1-207ENST00000602619 ZSWIM6Q9HCJ5 1215 aa9□□□□□ -0.97
SGMS1-207ENST00000602619 MS4A4AQ96JQ5 239 aa8.95□□□□□ -0.98
SGMS1-207ENST00000602619 SOX12O15370 315 aa8.94□□□□□ -0.98
SGMS1-207ENST00000602619 ARSIQ5FYB1 569 aa8.93□□□□□ -0.98
SGMS1-207ENST00000602619 TRIM41Q8WV44 630 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms