RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 GOLGA3Q08378 1498 aa19.46■□□□□ 0.71
SYMPK-215ENST00000600237 SCAF1Q9H7N4 1312 aaKnown RBP19.45■□□□□ 0.7
SYMPK-215ENST00000600237 KCNH8Q96L42 1107 aa19.42■□□□□ 0.7
SYMPK-215ENST00000600237 EIF4G2P78344 907 aaKnown RBP eCLIP19.41■□□□□ 0.72e-7■■■■■ 34.2
SYMPK-215ENST00000600237 SALL2Q9Y467 1007 aaPredicted RBP19.4■□□□□ 0.7
SYMPK-215ENST00000600237 WDR43Q15061 677 aaKnown RBP eCLIP19.4■□□□□ 0.73e-6■■■■□ 24.6
SYMPK-215ENST00000600237 CEP162Q5TB80 1403 aa19.4■□□□□ 0.7
SYMPK-215ENST00000600237 CECR2Q9BXF3 1484 aa19.38■□□□□ 0.69
SYMPK-215ENST00000600237 MYO15BQ96JP2 1530 aa19.37■□□□□ 0.69
SYMPK-215ENST00000600237 EIF5BO60841 1220 aaKnown RBP19.32■□□□□ 0.68
SYMPK-215ENST00000600237 CEP164Q9UPV0 1460 aa19.31■□□□□ 0.68
SYMPK-215ENST00000600237 KDM2AQ9Y2K7 1162 aa19.31■□□□□ 0.68
SYMPK-215ENST00000600237 TNIKQ9UKE5 1360 aa19.3■□□□□ 0.68
SYMPK-215ENST00000600237 RRP7BPQ9NSQ0 103 aa19.3■□□□□ 0.68
SYMPK-215ENST00000600237 CFDP1Q9UEE9 299 aaPredicted RBP19.27■□□□□ 0.67
SYMPK-215ENST00000600237 HIRIP3Q9BW71 556 aaPredicted RBP19.26■□□□□ 0.67
SYMPK-215ENST00000600237 NBR1Q14596 966 aa19.26■□□□□ 0.67
SYMPK-215ENST00000600237 IRX6P78412 446 aaPredicted RBP19.22■□□□□ 0.67
SYMPK-215ENST00000600237 PPP1R15AO75807 674 aaPredicted RBP19.18■□□□□ 0.66
SYMPK-215ENST00000600237 GLIPR1L2Q4G1C9 344 aa19.18■□□□□ 0.66
SYMPK-215ENST00000600237 DDRGK1Q96HY6 314 aa19.17■□□□□ 0.66
SYMPK-215ENST00000600237 CARMIL1Q5VZK9 1371 aa19.17■□□□□ 0.66
SYMPK-215ENST00000600237 CUX2O14529 1486 aa19.16■□□□□ 0.66
SYMPK-215ENST00000600237 SMARCA2P51531 1590 aa19.16■□□□□ 0.66
SYMPK-215ENST00000600237 MYH16Q9H6N6 1097 aa19.15■□□□□ 0.66
SYMPK-215ENST00000600237 ARID4BQ4LE39 1312 aaPredicted RBP19.13■□□□□ 0.65
SYMPK-215ENST00000600237 PDS5BQ9NTI5 1447 aa19.13■□□□□ 0.65
SYMPK-215ENST00000600237 BECN1Q14457 450 aa19.12■□□□□ 0.65
SYMPK-215ENST00000600237 MROH2BQ7Z745 1585 aa19.12■□□□□ 0.65
SYMPK-215ENST00000600237 CDCA8Q53HL2 280 aa19.12■□□□□ 0.65
SYMPK-215ENST00000600237 ANP32EQ9BTT0 268 aa19.1■□□□□ 0.65
SYMPK-215ENST00000600237 FHAD1B1AJZ9 1412 aa19.09■□□□□ 0.65
SYMPK-215ENST00000600237 CCDC88BA6NC98 1476 aa19.08■□□□□ 0.64
SYMPK-215ENST00000600237 RGL3Q3MIN7 710 aa19.07■□□□□ 0.64
SYMPK-215ENST00000600237 SUPT16HQ9Y5B9 1047 aaKnown RBP19.05■□□□□ 0.64
SYMPK-215ENST00000600237 EIF4G1Q04637 1599 aaKnown RBP19.05■□□□□ 0.64
SYMPK-215ENST00000600237 TIMELESSQ9UNS1 1208 aa19.04■□□□□ 0.64
SYMPK-215ENST00000600237 CCNB3Q8WWL7 1395 aa19.04■□□□□ 0.64
SYMPK-215ENST00000600237 CFAP53Q96M91 514 aa19.04■□□□□ 0.64
SYMPK-215ENST00000600237 KNSTRNQ9Y448 316 aa19.03■□□□□ 0.64
SYMPK-215ENST00000600237 CARD11Q9BXL7 1154 aa19.02■□□□□ 0.64
SYMPK-215ENST00000600237 SOGA1O94964 1423 aa19.01■□□□□ 0.63
SYMPK-215ENST00000600237 PPP4R2Q9NY27 417 aa19.01■□□□□ 0.63
SYMPK-215ENST00000600237 ARXQ96QS3 562 aa19.01■□□□□ 0.63
SYMPK-215ENST00000600237 SENP3Q9H4L4 574 aaPredicted RBP19.01■□□□□ 0.63
SYMPK-215ENST00000600237 C14orf37Q86TY3 774 aa19.01■□□□□ 0.63
SYMPK-215ENST00000600237 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
SYMPK-215ENST00000600237 GOLGA6L22H0YM25 854 aa18.97■□□□□ 0.63
SYMPK-215ENST00000600237 SIN3AQ96ST3 1273 aa18.96■□□□□ 0.63
SYMPK-215ENST00000600237 CARMIL2Q6F5E8 1435 aa18.94■□□□□ 0.62
SYMPK-215ENST00000600237 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
SYMPK-215ENST00000600237 CADPSQ9ULU8 1353 aa18.92■□□□□ 0.62
SYMPK-215ENST00000600237 TRIM44Q96DX7 344 aaPredicted RBP18.92■□□□□ 0.62
SYMPK-215ENST00000600237 NCLP19338 710 aaKnown RBP18.92■□□□□ 0.62
SYMPK-215ENST00000600237 TRHP20396 242 aaPredicted RBP18.89■□□□□ 0.62
SYMPK-215ENST00000600237 CCER2I3L3R5 266 aa18.89■□□□□ 0.61
SYMPK-215ENST00000600237 TOP2AP11388 1531 aaKnown RBP18.89■□□□□ 0.61
SYMPK-215ENST00000600237 ZBTB7CA1YPR0 619 aa18.88■□□□□ 0.61
SYMPK-215ENST00000600237 FTSJ3Q8IY81 847 aaKnown RBP18.87■□□□□ 0.61
SYMPK-215ENST00000600237 ABCC8Q09428 1581 aa18.86■□□□□ 0.61
SYMPK-215ENST00000600237 KANK1Q14678 1352 aa18.85■□□□□ 0.61
SYMPK-215ENST00000600237 NUDCQ9Y266 331 aa18.85■□□□□ 0.61
SYMPK-215ENST00000600237 PLEKHG5O94827 1062 aa18.85■□□□□ 0.61
SYMPK-215ENST00000600237 VPS8Q8N3P4 1428 aa18.84■□□□□ 0.61
SYMPK-215ENST00000600237 MAPK8IP3Q9UPT6 1336 aa18.83■□□□□ 0.6
SYMPK-215ENST00000600237 A0A0G2JS52 829 aa18.83■□□□□ 0.6
SYMPK-215ENST00000600237 POGKQ9P215 609 aa18.82■□□□□ 0.6
SYMPK-215ENST00000600237 ATAD2BQ9ULI0 1458 aa18.82■□□□□ 0.6
SYMPK-215ENST00000600237 CASC1Q6TDU7 716 aa18.82■□□□□ 0.6
SYMPK-215ENST00000600237 CHMP4BQ9H444 224 aaKnown RBP18.82■□□□□ 0.6
SYMPK-215ENST00000600237 MS4A1P11836 297 aa18.82■□□□□ 0.6
SYMPK-215ENST00000600237 NOP58Q9Y2X3 529 aaKnown RBP18.81■□□□□ 0.6
SYMPK-215ENST00000600237 ERICH6BQ5W0A0 696 aa18.81■□□□□ 0.6
SYMPK-215ENST00000600237 HAP1P54257 671 aaPredicted RBP18.81■□□□□ 0.6
SYMPK-215ENST00000600237 SENP3-EIF4A1A0A087X0R7 540 aa18.8■□□□□ 0.6
SYMPK-215ENST00000600237 SETD5Q9C0A6 1442 aa18.79■□□□□ 0.6
SYMPK-215ENST00000600237 WIZO95785 1651 aa18.79■□□□□ 0.6
SYMPK-215ENST00000600237 FMN1Q68DA7 1419 aa18.78■□□□□ 0.6
SYMPK-215ENST00000600237 HDGFP51858 240 aaKnown RBP18.77■□□□□ 0.6
SYMPK-215ENST00000600237 TMF1P82094 1093 aa18.77■□□□□ 0.6
SYMPK-215ENST00000600237 NEUROD2Q15784 382 aa18.77■□□□□ 0.6
SYMPK-215ENST00000600237 ARHGAP35Q9NRY4 1499 aa18.76■□□□□ 0.59
SYMPK-215ENST00000600237 MLECQ14165 292 aa18.76■□□□□ 0.59
SYMPK-215ENST00000600237 RGS3P49796 1198 aa18.76■□□□□ 0.59
SYMPK-215ENST00000600237 B4GALNT3Q6L9W6 998 aa18.75■□□□□ 0.59
SYMPK-215ENST00000600237 EFCAB2Q5VUJ9 269 aa18.74■□□□□ 0.59
SYMPK-215ENST00000600237 FRAT1Q92837 279 aaPredicted RBP18.72■□□□□ 0.59
SYMPK-215ENST00000600237 CC2D1BQ5T0F9 858 aaKnown RBP18.71■□□□□ 0.59
SYMPK-215ENST00000600237 DCAF11Q8TEB1 546 aa18.71■□□□□ 0.59
SYMPK-215ENST00000600237 PNNQ9H307 717 aaKnown RBP18.71■□□□□ 0.59
SYMPK-215ENST00000600237 GGT6Q6P531 493 aa18.71■□□□□ 0.59
SYMPK-215ENST00000600237 LAS1LQ9Y4W2 734 aaKnown RBP18.7■□□□□ 0.58
SYMPK-215ENST00000600237 PTMAP06454 111 aaKnown RBP18.7■□□□□ 0.58
SYMPK-215ENST00000600237 RAPGEF2Q9Y4G8 1499 aa18.69■□□□□ 0.58
SYMPK-215ENST00000600237 SMARCA4P51532 1647 aa18.69■□□□□ 0.58
SYMPK-215ENST00000600237 ZRSR1Q15695 479 aaKnown RBP18.68■□□□□ 0.58
SYMPK-215ENST00000600237 HSPA5P11021 654 aaKnown RBP18.68■□□□□ 0.58
SYMPK-215ENST00000600237 KANK4Q5T7N3 995 aaPredicted RBP18.68■□□□□ 0.58
SYMPK-215ENST00000600237 LMOD2Q6P5Q4 547 aa18.67■□□□□ 0.58
SYMPK-215ENST00000600237 CDK11BP21127 795 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms