RNA–Protein interactions for RNA: ENST00000598346.5

FARP1-223, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-223ENST00000598346 SPOCK2Q92563 424 aa14.88□□□□□ -0.03
FARP1-223ENST00000598346 PHF12Q96QT6 1004 aa14.87□□□□□ -0.03
FARP1-223ENST00000598346 GALR2O43603 387 aaPredicted RBP14.86□□□□□ -0.03
FARP1-223ENST00000598346 LHX8Q68G74 356 aa14.86□□□□□ -0.03
FARP1-223ENST00000598346 ZBTB47Q9UFB7 747 aaPredicted RBP14.86□□□□□ -0.03
FARP1-223ENST00000598346 TSPYL2Q9H2G4 693 aaPredicted RBP14.82□□□□□ -0.04
FARP1-223ENST00000598346 PKD2Q13563 968 aa14.81□□□□□ -0.04
FARP1-223ENST00000598346 CCDC61Q9Y6R9 512 aa14.75□□□□□ -0.05
FARP1-223ENST00000598346 MS4A3Q96HJ5 214 aa14.7□□□□□ -0.06
FARP1-223ENST00000598346 RASEFQ8IZ41 740 aa14.68□□□□□ -0.06
FARP1-223ENST00000598346 SLC24A1O60721 1099 aa14.66□□□□□ -0.06
FARP1-223ENST00000598346 KIF12Q96FN5 646 aa14.66□□□□□ -0.06
FARP1-223ENST00000598346 ASTLQ6HA08 431 aaPredicted RBP14.62□□□□□ -0.07
FARP1-223ENST00000598346 ECM2O94769 699 aaPredicted RBP14.61□□□□□ -0.07
FARP1-223ENST00000598346 NUBP1P53384 320 aa14.6□□□□□ -0.07
FARP1-223ENST00000598346 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
FARP1-223ENST00000598346 FAM212AQ96EL1 285 aa14.59□□□□□ -0.07
FARP1-223ENST00000598346 CIZ1Q9ULV3 898 aaPredicted RBP14.58□□□□□ -0.08
FARP1-223ENST00000598346 ATMINO43313 823 aaPredicted RBP14.57□□□□□ -0.08
FARP1-223ENST00000598346 MAP3K13O43283 966 aa14.56□□□□□ -0.08
FARP1-223ENST00000598346 SGIP1Q9BQI5 828 aa14.56□□□□□ -0.08
FARP1-223ENST00000598346 SLC39A7Q92504 469 aa14.55□□□□□ -0.08
FARP1-223ENST00000598346 C7P10643 843 aa14.54□□□□□ -0.08
FARP1-223ENST00000598346 PELP1Q8IZL8 1130 aaKnown RBP14.53□□□□□ -0.08
FARP1-223ENST00000598346 TIE1P35590 1138 aa14.5□□□□□ -0.09
FARP1-223ENST00000598346 METRNQ9UJH8 293 aa14.49□□□□□ -0.09
FARP1-223ENST00000598346 RGL2O15211 777 aa14.48□□□□□ -0.09
FARP1-223ENST00000598346 GSE1Q14687 1217 aa14.47□□□□□ -0.09
FARP1-223ENST00000598346 PCDHB13Q9Y5F0 798 aa14.47□□□□□ -0.09
FARP1-223ENST00000598346 ATN1P54259 1190 aaPredicted RBP14.45□□□□□ -0.1
FARP1-223ENST00000598346 TRIM41Q8WV44 630 aa14.45□□□□□ -0.1
FARP1-223ENST00000598346 BMP2KQ9NSY1 1161 aaPredicted RBP14.45□□□□□ -0.1
FARP1-223ENST00000598346 DCAF8Q5TAQ9 597 aa14.44□□□□□ -0.1
FARP1-223ENST00000598346 POTEB2H3BUK9 544 aa14.39□□□□□ -0.11
FARP1-223ENST00000598346 TRPC6Q9Y210 931 aa14.39□□□□□ -0.11
FARP1-223ENST00000598346 TTLL13PA6NNM8 815 aa14.37□□□□□ -0.11
FARP1-223ENST00000598346 OTUD5Q96G74 571 aa14.37□□□□□ -0.11
FARP1-223ENST00000598346 PLCB2Q00722 1185 aa14.36□□□□□ -0.11
FARP1-223ENST00000598346 MAMSTRQ6ZN01 415 aa14.36□□□□□ -0.11
FARP1-223ENST00000598346 IFNL1Q8IU54 200 aa14.35□□□□□ -0.11
FARP1-223ENST00000598346 IER5LQ5T953 404 aa14.31□□□□□ -0.12
FARP1-223ENST00000598346 RNF25Q96BH1 459 aaPredicted RBP14.3□□□□□ -0.12
FARP1-223ENST00000598346 PYGBP11216 843 aa14.29□□□□□ -0.12
FARP1-223ENST00000598346 SEC24BO95487 1268 aa14.28□□□□□ -0.12
FARP1-223ENST00000598346 TRIM35Q9UPQ4 493 aa14.28□□□□□ -0.12
FARP1-223ENST00000598346 BBXQ8WY36 941 aaPredicted RBP14.27□□□□□ -0.13
FARP1-223ENST00000598346 TMEM106CQ9BVX2 250 aa14.27□□□□□ -0.13
FARP1-223ENST00000598346 SCUBE2Q9NQ36 999 aa14.25□□□□□ -0.13
FARP1-223ENST00000598346 CHRM1P11229 460 aaPredicted RBP14.24□□□□□ -0.13
FARP1-223ENST00000598346 CHGAP10645 457 aaKnown RBP14.23□□□□□ -0.13
FARP1-223ENST00000598346 RIOK3O14730 519 aaKnown RBP14.21□□□□□ -0.13
FARP1-223ENST00000598346 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.21□□□□□ -0.13
FARP1-223ENST00000598346 POTEFA5A3E0 1075 aa14.2□□□□□ -0.14
FARP1-223ENST00000598346 POTEJP0CG39 1038 aa14.2□□□□□ -0.14
FARP1-223ENST00000598346 ZNF467Q7Z7K2 595 aaPredicted RBP14.2□□□□□ -0.14
FARP1-223ENST00000598346 HS6ST3Q8IZP7 471 aa14.16□□□□□ -0.14
FARP1-223ENST00000598346 PCDHB8Q9UN66 801 aa14.16□□□□□ -0.14
FARP1-223ENST00000598346 COLQQ9Y215 455 aaPredicted RBP14.16□□□□□ -0.14
FARP1-223ENST00000598346 TAOK2Q9UL54 1235 aa14.15□□□□□ -0.14
FARP1-223ENST00000598346 PLCG2P16885 1265 aa14.12□□□□□ -0.15
FARP1-223ENST00000598346 HAP1P54257 671 aaPredicted RBP14.12□□□□□ -0.15
FARP1-223ENST00000598346 PAXIP1Q6ZW49 1069 aaPredicted RBP14.12□□□□□ -0.15
FARP1-223ENST00000598346 VGFO15240 615 aaPredicted RBP14.11□□□□□ -0.15
FARP1-223ENST00000598346 CFAP44Q96MT7 982 aa14.08□□□□□ -0.16
FARP1-223ENST00000598346 IRX5P78411 483 aaPredicted RBP14.06□□□□□ -0.16
FARP1-223ENST00000598346 SPRYD3Q8NCJ5 442 aa14.06□□□□□ -0.16
FARP1-223ENST00000598346 OCEL1Q9H607 264 aa14.06□□□□□ -0.16
FARP1-223ENST00000598346 DNAJC5Q9H3Z4 198 aa14.05□□□□□ -0.16
FARP1-223ENST00000598346 STK25O00506 426 aa14.04□□□□□ -0.16
FARP1-223ENST00000598346 GOLGA2Q08379 1002 aa14.04□□□□□ -0.16
FARP1-223ENST00000598346 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.01□□□□□ -0.17
FARP1-223ENST00000598346 PSEN1P49768 467 aa14.01□□□□□ -0.17
FARP1-223ENST00000598346 ZFP91Q96JP5 570 aaPredicted RBP14.01□□□□□ -0.17
FARP1-223ENST00000598346 MKRN3Q13064 507 aaKnown RBP14□□□□□ -0.17
FARP1-223ENST00000598346 PDAP1Q13442 181 aaKnown RBP13.99□□□□□ -0.17
FARP1-223ENST00000598346 NKX1-1Q15270 411 aaPredicted RBP13.97□□□□□ -0.17
FARP1-223ENST00000598346 BCL11BQ9C0K0 894 aaPredicted RBP13.97□□□□□ -0.17
FARP1-223ENST00000598346 POTEMA6NI47 508 aa13.96□□□□□ -0.17
FARP1-223ENST00000598346 STK24Q9Y6E0 443 aa13.95□□□□□ -0.18
FARP1-223ENST00000598346 POTEGQ6S5H5 508 aa13.93□□□□□ -0.18
FARP1-223ENST00000598346 VSIG10Q8N0Z9 540 aa13.93□□□□□ -0.18
FARP1-223ENST00000598346 FAM163AQ96GL9 167 aaPredicted RBP13.93□□□□□ -0.18
FARP1-223ENST00000598346 SLAIN1Q8ND83 568 aa13.92□□□□□ -0.18
FARP1-223ENST00000598346 L3MBTL3Q96JM7 780 aaPredicted RBP13.88□□□□□ -0.19
FARP1-223ENST00000598346 TSHZ2Q9NRE2 1034 aa13.88□□□□□ -0.19
FARP1-223ENST00000598346 PCDH10Q9P2E7 1040 aa13.88□□□□□ -0.19
FARP1-223ENST00000598346 GTPBP6O43824 516 aaPredicted RBP13.87□□□□□ -0.19
FARP1-223ENST00000598346 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.87□□□□□ -0.19
FARP1-223ENST00000598346 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.87□□□□□ -0.19
FARP1-223ENST00000598346 PDCD7Q8N8D1 485 aaKnown RBP13.85□□□□□ -0.19
FARP1-223ENST00000598346 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
FARP1-223ENST00000598346 CABP2Q9NPB3 220 aa13.82□□□□□ -0.2
FARP1-223ENST00000598346 LCE2DQ5TA82 110 aaPredicted RBP13.81□□□□□ -0.2
FARP1-223ENST00000598346 SNPHO15079 494 aa13.79□□□□□ -0.2
FARP1-223ENST00000598346 C3orf67Q6ZVT6 689 aa13.79□□□□□ -0.2
FARP1-223ENST00000598346 ILDR1Q86SU0 546 aaPredicted RBP13.79□□□□□ -0.2
FARP1-223ENST00000598346 RYDENQ9NUL5 291 aaKnown RBP13.77□□□□□ -0.21
FARP1-223ENST00000598346 PLSCR2Q9NRY7 297 aa13.75□□□□□ -0.21
FARP1-223ENST00000598346 G3V3G9 751 aa13.73□□□□□ -0.21
FARP1-223ENST00000598346 ST18O60284 1047 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms