RNA–Protein interactions for RNA: ENST00000598249.5

SPTBN4-212, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPTBN4, Length 8,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-212ENST00000598249 ERCC6Q03468 1493 aa22.67■■□□□ 1.22
SPTBN4-212ENST00000598249 CHIC2Q9UKJ5 165 aa22.66■■□□□ 1.22
SPTBN4-212ENST00000598249 LMOD2Q6P5Q4 547 aa22.66■■□□□ 1.22
SPTBN4-212ENST00000598249 FAM9BQ8IZU0 186 aa22.65■■□□□ 1.22
SPTBN4-212ENST00000598249 TRIM44Q96DX7 344 aaPredicted RBP22.63■■□□□ 1.21
SPTBN4-212ENST00000598249 MTUS2Q5JR59 1369 aa22.63■■□□□ 1.21
SPTBN4-212ENST00000598249 FKBP8Q14318 412 aa22.59■■□□□ 1.21
SPTBN4-212ENST00000598249 ZRSR1Q15695 479 aaKnown RBP22.58■■□□□ 1.21
SPTBN4-212ENST00000598249 GOLGA2Q08379 1002 aa22.58■■□□□ 1.2
SPTBN4-212ENST00000598249 HNRNPUQ00839 825 aaKnown RBP eCLIP22.57■■□□□ 1.2
SPTBN4-212ENST00000598249 ANP32EQ9BTT0 268 aa22.56■■□□□ 1.2
SPTBN4-212ENST00000598249 NCLP19338 710 aaKnown RBP22.54■■□□□ 1.2
SPTBN4-212ENST00000598249 CCDC180Q9P1Z9 1646 aa22.54■■□□□ 1.2
SPTBN4-212ENST00000598249 RB1CC1Q8TDY2 1594 aa22.53■■□□□ 1.2
SPTBN4-212ENST00000598249 PPM1GO15355 546 aaPredicted RBP22.52■■□□□ 1.2
SPTBN4-212ENST00000598249 CASC1Q6TDU7 716 aa22.51■■□□□ 1.19
SPTBN4-212ENST00000598249 PLEKHD1A6NEE1 506 aa22.49■■□□□ 1.19
SPTBN4-212ENST00000598249 CFAP53Q96M91 514 aa22.48■■□□□ 1.19
SPTBN4-212ENST00000598249 CCDC136Q96JN2 1154 aa22.46■■□□□ 1.19
SPTBN4-212ENST00000598249 EIF4G2P78344 907 aaKnown RBP eCLIP22.42■■□□□ 1.18
SPTBN4-212ENST00000598249 NCBP3Q53F19 620 aaKnown RBP22.41■■□□□ 1.18
SPTBN4-212ENST00000598249 CDCA8Q53HL2 280 aa22.41■■□□□ 1.18
SPTBN4-212ENST00000598249 POGKQ9P215 609 aa22.4■■□□□ 1.18
SPTBN4-212ENST00000598249 ERICH6BQ5W0A0 696 aa22.38■■□□□ 1.17
SPTBN4-212ENST00000598249 HDGFP51858 240 aaKnown RBP22.38■■□□□ 1.17
SPTBN4-212ENST00000598249 DDX10Q13206 875 aaKnown RBP22.38■■□□□ 1.17
SPTBN4-212ENST00000598249 RSF1Q96T23 1441 aaPredicted RBP22.37■■□□□ 1.17
SPTBN4-212ENST00000598249 KAT6BQ8WYB5 2073 aa22.36■■□□□ 1.17
SPTBN4-212ENST00000598249 FTSJ3Q8IY81 847 aaKnown RBP22.34■■□□□ 1.17
SPTBN4-212ENST00000598249 TMX4Q9H1E5 349 aaPredicted RBP22.34■■□□□ 1.17
SPTBN4-212ENST00000598249 DDRGK1Q96HY6 314 aa22.33■■□□□ 1.16
SPTBN4-212ENST00000598249 LAS1LQ9Y4W2 734 aaKnown RBP22.32■■□□□ 1.16
SPTBN4-212ENST00000598249 BECN1Q14457 450 aa22.32■■□□□ 1.16
SPTBN4-212ENST00000598249 CLSTN1O94985 981 aa22.32■■□□□ 1.16
SPTBN4-212ENST00000598249 RGL3Q3MIN7 710 aa22.32■■□□□ 1.16
SPTBN4-212ENST00000598249 GOLGA6L22H0YM25 854 aa22.32■■□□□ 1.16
SPTBN4-212ENST00000598249 DNTTIP2Q5QJE6 756 aaKnown RBP22.32■■□□□ 1.16
SPTBN4-212ENST00000598249 MRS2Q9HD23 443 aa22.31■■□□□ 1.16
SPTBN4-212ENST00000598249 KNSTRNQ9Y448 316 aa22.3■■□□□ 1.16
SPTBN4-212ENST00000598249 OS9Q13438 667 aaPredicted RBP22.3■■□□□ 1.16
SPTBN4-212ENST00000598249 TAOK2Q9UL54 1235 aa22.28■■□□□ 1.16
SPTBN4-212ENST00000598249 TPRNQ4KMQ1 711 aa22.28■■□□□ 1.16
SPTBN4-212ENST00000598249 FGD1P98174 961 aa22.28■■□□□ 1.16
SPTBN4-212ENST00000598249 MAPK8IP3Q9UPT6 1336 aa22.27■■□□□ 1.16
SPTBN4-212ENST00000598249 NAP1L5Q96NT1 182 aaPredicted RBP22.27■■□□□ 1.16
SPTBN4-212ENST00000598249 PNNQ9H307 717 aaKnown RBP22.26■■□□□ 1.15
SPTBN4-212ENST00000598249 PTMAP06454 111 aaKnown RBP22.25■■□□□ 1.15
SPTBN4-212ENST00000598249 ISY1Q9ULR0 285 aaKnown RBP22.25■■□□□ 1.15
SPTBN4-212ENST00000598249 RRP7BPQ9NSQ0 103 aa22.24■■□□□ 1.15
SPTBN4-212ENST00000598249 NUDCQ9Y266 331 aa22.24■■□□□ 1.15
SPTBN4-212ENST00000598249 KANK1Q14678 1352 aa22.21■■□□□ 1.15
SPTBN4-212ENST00000598249 NAP1L2Q9ULW6 460 aaPredicted RBP22.2■■□□□ 1.14
SPTBN4-212ENST00000598249 MLECQ14165 292 aa22.2■■□□□ 1.14
SPTBN4-212ENST00000598249 KCNJ4P48050 445 aa22.19■■□□□ 1.14
SPTBN4-212ENST00000598249 AMER1Q5JTC6 1135 aaPredicted RBP22.19■■□□□ 1.14
SPTBN4-212ENST00000598249 CFDP1Q9UEE9 299 aaPredicted RBP22.19■■□□□ 1.14
SPTBN4-212ENST00000598249 CHMP4BQ9H444 224 aaKnown RBP22.16■■□□□ 1.14
SPTBN4-212ENST00000598249 IRX6P78412 446 aaPredicted RBP22.14■■□□□ 1.13
SPTBN4-212ENST00000598249 GOLGA6L6A8MZA4 724 aa22.12■■□□□ 1.13
SPTBN4-212ENST00000598249 CCDC9Q9Y3X0 531 aaKnown RBP22.1■■□□□ 1.13
SPTBN4-212ENST00000598249 ZCCHC6Q5VYS8 1495 aaKnown RBP22.09■■□□□ 1.13
SPTBN4-212ENST00000598249 BAZ1BQ9UIG0 1483 aaKnown RBP22.08■■□□□ 1.13
SPTBN4-212ENST00000598249 RTN4Q9NQC3 1192 aaKnown RBP22.06■■□□□ 1.12
SPTBN4-212ENST00000598249 AEBP2Q6ZN18 517 aaPredicted RBP22.05■■□□□ 1.12
SPTBN4-212ENST00000598249 G3V3G9 751 aa22.05■■□□□ 1.12
SPTBN4-212ENST00000598249 DCAF8Q5TAQ9 597 aa22.05■■□□□ 1.12
SPTBN4-212ENST00000598249 SOX12O15370 315 aa22.05■■□□□ 1.12
SPTBN4-212ENST00000598249 EIF4G1Q04637 1599 aaKnown RBP22.04■■□□□ 1.12
SPTBN4-212ENST00000598249 CLIP1P30622 1438 aa22.04■■□□□ 1.12
SPTBN4-212ENST00000598249 U2SURPO15042 1029 aaKnown RBP22.03■■□□□ 1.12
SPTBN4-212ENST00000598249 PAK3O75914 559 aaPredicted RBP22.03■■□□□ 1.12
SPTBN4-212ENST00000598249 NEUROD2Q15784 382 aa22.03■■□□□ 1.12
SPTBN4-212ENST00000598249 CHAF1AQ13111 956 aaPredicted RBP22.02■■□□□ 1.12
SPTBN4-212ENST00000598249 RTF1Q92541 710 aaKnown RBP22.02■■□□□ 1.12
SPTBN4-212ENST00000598249 NRDCO43847 1150 aa22.02■■□□□ 1.11
SPTBN4-212ENST00000598249 CARD11Q9BXL7 1154 aa22■■□□□ 1.11
SPTBN4-212ENST00000598249 SRPK2P78362 688 aaKnown RBP22■■□□□ 1.11
SPTBN4-212ENST00000598249 PRM3Q9NNZ6 103 aa21.99■■□□□ 1.11
SPTBN4-212ENST00000598249 MS4A1P11836 297 aa21.99■■□□□ 1.11
SPTBN4-212ENST00000598249 CSB-PGBD3P0DP91 1061 aa21.98■■□□□ 1.11
SPTBN4-212ENST00000598249 GNL2Q13823 731 aaKnown RBP21.97■■□□□ 1.11
SPTBN4-212ENST00000598249 PLCB2Q00722 1185 aa21.96■■□□□ 1.11
SPTBN4-212ENST00000598249 NACADO15069 1562 aa21.95■■□□□ 1.1
SPTBN4-212ENST00000598249 HIRIP3Q9BW71 556 aaPredicted RBP21.93■■□□□ 1.1
SPTBN4-212ENST00000598249 ZNF330Q9Y3S2 320 aaPredicted RBP21.92■■□□□ 1.1
SPTBN4-212ENST00000598249 GOLGA6L4A6NEF3 574 aa21.91■■□□□ 1.1
SPTBN4-212ENST00000598249 KIAA2012Q0VF49 1180 aa21.91■■□□□ 1.1
SPTBN4-212ENST00000598249 L1TD1Q5T7N2 865 aaKnown RBP21.91■■□□□ 1.1
SPTBN4-212ENST00000598249 KIF27Q86VH2 1401 aa21.9■■□□□ 1.1
SPTBN4-212ENST00000598249 KRI1Q8N9T8 703 aaKnown RBP21.89■■□□□ 1.09
SPTBN4-212ENST00000598249 MCCP23508 829 aa21.88■■□□□ 1.09
SPTBN4-212ENST00000598249 HSP90AB1P08238 724 aaKnown RBP21.87■■□□□ 1.09
SPTBN4-212ENST00000598249 TNNT3P45378 269 aaPredicted RBP21.87■■□□□ 1.09
SPTBN4-212ENST00000598249 FRAT1Q92837 279 aaPredicted RBP21.87■■□□□ 1.09
SPTBN4-212ENST00000598249 MSNP26038 577 aaKnown RBP21.84■■□□□ 1.09
SPTBN4-212ENST00000598249 DCAF8L1A6NGE4 600 aa21.84■■□□□ 1.09
SPTBN4-212ENST00000598249 GOLGA3Q08378 1498 aa21.84■■□□□ 1.09
SPTBN4-212ENST00000598249 EID1Q9Y6B2 187 aa21.82■■□□□ 1.08
SPTBN4-212ENST00000598249 CCNB3Q8WWL7 1395 aa21.82■■□□□ 1.08
SPTBN4-212ENST00000598249 TAF7LQ5H9L4 462 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms