RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 NPHP1O15259 732 aa24.58■■□□□ 1.52
SYNM-204ENST00000594047 RRP7BPQ9NSQ0 103 aa24.58■■□□□ 1.52
SYNM-204ENST00000594047 FKBP8Q14318 412 aa24.57■■□□□ 1.52
SYNM-204ENST00000594047 MLECQ14165 292 aa24.55■■□□□ 1.52
SYNM-204ENST00000594047 IRX6P78412 446 aaPredicted RBP24.55■■□□□ 1.52
SYNM-204ENST00000594047 UPF2Q9HAU5 1272 aaKnown RBP24.44■■□□□ 1.5
SYNM-204ENST00000594047 SOX12O15370 315 aa24.44■■□□□ 1.5
SYNM-204ENST00000594047 LAS1LQ9Y4W2 734 aaKnown RBP24.43■■□□□ 1.5
SYNM-204ENST00000594047 ANP32BQ92688 251 aaKnown RBP24.41■■□□□ 1.5
SYNM-204ENST00000594047 NCBP3Q53F19 620 aaKnown RBP24.4■■□□□ 1.5
SYNM-204ENST00000594047 MTUS2Q5JR59 1369 aa24.39■■□□□ 1.49
SYNM-204ENST00000594047 TNNT2P45379 298 aaPredicted RBP24.38■■□□□ 1.49
SYNM-204ENST00000594047 CDK11BP21127 795 aaKnown RBP24.36■■□□□ 1.49
SYNM-204ENST00000594047 NBR1Q14596 966 aa24.35■■□□□ 1.49
SYNM-204ENST00000594047 EIF5BO60841 1220 aaKnown RBP24.34■■□□□ 1.49
SYNM-204ENST00000594047 MYH16Q9H6N6 1097 aa24.34■■□□□ 1.49
SYNM-204ENST00000594047 NEUROD2Q15784 382 aa24.33■■□□□ 1.49
SYNM-204ENST00000594047 MRS2Q9HD23 443 aa24.32■■□□□ 1.48
SYNM-204ENST00000594047 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.31■■□□□ 1.48
SYNM-204ENST00000594047 CCDC136Q96JN2 1154 aa24.28■■□□□ 1.48
SYNM-204ENST00000594047 ERCC6Q03468 1493 aa24.25■■□□□ 1.47
SYNM-204ENST00000594047 PLEKHD1A6NEE1 506 aa24.25■■□□□ 1.47
SYNM-204ENST00000594047 SAFB2Q14151 953 aaKnown RBP eCLIP24.21■■□□□ 1.47
SYNM-204ENST00000594047 POGKQ9P215 609 aa24.2■■□□□ 1.47
SYNM-204ENST00000594047 AMER1Q5JTC6 1135 aaPredicted RBP24.1■■□□□ 1.45
SYNM-204ENST00000594047 ISY1Q9ULR0 285 aaKnown RBP24.06■■□□□ 1.44
SYNM-204ENST00000594047 CFDP1Q9UEE9 299 aaPredicted RBP24.06■■□□□ 1.44
SYNM-204ENST00000594047 ACIN1Q9UKV3 1341 aaKnown RBP24.06■■□□□ 1.44
SYNM-204ENST00000594047 NAP1L2Q9ULW6 460 aaPredicted RBP24.06■■□□□ 1.44
SYNM-204ENST00000594047 NCLP19338 710 aaKnown RBP24.05■■□□□ 1.44
SYNM-204ENST00000594047 CCDC9Q9Y3X0 531 aaKnown RBP24.05■■□□□ 1.44
SYNM-204ENST00000594047 ZNF330Q9Y3S2 320 aaPredicted RBP24.04■■□□□ 1.44
SYNM-204ENST00000594047 U2SURPO15042 1029 aaKnown RBP24.02■■□□□ 1.44
SYNM-204ENST00000594047 CLSTN1O94985 981 aa24.02■■□□□ 1.44
SYNM-204ENST00000594047 CC2D1BQ5T0F9 858 aaKnown RBP24.02■■□□□ 1.44
SYNM-204ENST00000594047 GOLGA2Q08379 1002 aa24■■□□□ 1.43
SYNM-204ENST00000594047 ZBTB4Q9P1Z0 1013 aaPredicted RBP24■■□□□ 1.43
SYNM-204ENST00000594047 OS9Q13438 667 aaPredicted RBP23.99■■□□□ 1.43
SYNM-204ENST00000594047 PAK3O75914 559 aaPredicted RBP23.99■■□□□ 1.43
SYNM-204ENST00000594047 STK26Q9P289 416 aa23.99■■□□□ 1.43
SYNM-204ENST00000594047 KNSTRNQ9Y448 316 aa23.98■■□□□ 1.43
SYNM-204ENST00000594047 CFAP53Q96M91 514 aa23.97■■□□□ 1.43
SYNM-204ENST00000594047 EIF4G2P78344 907 aaKnown RBP eCLIP23.96■■□□□ 1.43
SYNM-204ENST00000594047 FTSJ3Q8IY81 847 aaKnown RBP23.96■■□□□ 1.43
SYNM-204ENST00000594047 ZCCHC6Q5VYS8 1495 aaKnown RBP23.96■■□□□ 1.43
SYNM-204ENST00000594047 FRAT1Q92837 279 aaPredicted RBP23.94■■□□□ 1.42
SYNM-204ENST00000594047 CARD11Q9BXL7 1154 aa23.94■■□□□ 1.42
SYNM-204ENST00000594047 MAPK8IP3Q9UPT6 1336 aa23.93■■□□□ 1.42
SYNM-204ENST00000594047 GGT6Q6P531 493 aa23.92■■□□□ 1.42
SYNM-204ENST00000594047 EIF4G1Q04637 1599 aaKnown RBP23.89■■□□□ 1.41
SYNM-204ENST00000594047 SRPK2P78362 688 aaKnown RBP23.87■■□□□ 1.41
SYNM-204ENST00000594047 CSB-PGBD3P0DP91 1061 aa23.84■■□□□ 1.41
SYNM-204ENST00000594047 NUTM2DQ5VT03 806 aaPredicted RBP23.83■■□□□ 1.41
SYNM-204ENST00000594047 ZRSR1Q15695 479 aaKnown RBP23.82■■□□□ 1.4
SYNM-204ENST00000594047 MIER1Q8N108 512 aa23.82■■□□□ 1.4
SYNM-204ENST00000594047 CLIP1P30622 1438 aa23.82■■□□□ 1.4
SYNM-204ENST00000594047 FGD1P98174 961 aa23.82■■□□□ 1.4
SYNM-204ENST00000594047 PLCB2Q00722 1185 aa23.79■■□□□ 1.4
SYNM-204ENST00000594047 APBB1O00213 710 aa23.77■■□□□ 1.4
SYNM-204ENST00000594047 KCNJ4P48050 445 aa23.77■■□□□ 1.4
SYNM-204ENST00000594047 RGS3P49796 1198 aa23.76■■□□□ 1.39
SYNM-204ENST00000594047 CASC1Q6TDU7 716 aa23.76■■□□□ 1.39
SYNM-204ENST00000594047 NUTM2FA1L443 756 aa23.75■■□□□ 1.39
SYNM-204ENST00000594047 SIN3AQ96ST3 1273 aa23.75■■□□□ 1.39
SYNM-204ENST00000594047 NUDCQ9Y266 331 aa23.72■■□□□ 1.39
SYNM-204ENST00000594047 DCAF11Q8TEB1 546 aa23.72■■□□□ 1.39
SYNM-204ENST00000594047 RSF1Q96T23 1441 aaPredicted RBP23.69■■□□□ 1.38
SYNM-204ENST00000594047 AEBP2Q6ZN18 517 aaPredicted RBP23.69■■□□□ 1.38
SYNM-204ENST00000594047 PTMAP06454 111 aaKnown RBP23.67■■□□□ 1.38
SYNM-204ENST00000594047 FOXD1Q16676 465 aa23.64■■□□□ 1.38
SYNM-204ENST00000594047 CDCA8Q53HL2 280 aa23.64■■□□□ 1.38
SYNM-204ENST00000594047 SPRYD3Q8NCJ5 442 aa23.64■■□□□ 1.37
SYNM-204ENST00000594047 ANO8Q9HCE9 1232 aaPredicted RBP23.64■■□□□ 1.37
SYNM-204ENST00000594047 BAZ1BQ9UIG0 1483 aaKnown RBP23.63■■□□□ 1.37
SYNM-204ENST00000594047 BECN1Q14457 450 aa23.61■■□□□ 1.37
SYNM-204ENST00000594047 SUPT16HQ9Y5B9 1047 aaKnown RBP23.6■■□□□ 1.37
SYNM-204ENST00000594047 RTF1Q92541 710 aaKnown RBP23.58■■□□□ 1.37
SYNM-204ENST00000594047 CHMP3Q9Y3E7 222 aa23.58■■□□□ 1.37
SYNM-204ENST00000594047 DNTTIP2Q5QJE6 756 aaKnown RBP23.57■■□□□ 1.36
SYNM-204ENST00000594047 LTV1Q96GA3 475 aaPredicted RBP23.57■■□□□ 1.36
SYNM-204ENST00000594047 RB1CC1Q8TDY2 1594 aa23.57■■□□□ 1.36
SYNM-204ENST00000594047 MSH5O43196 834 aa23.56■■□□□ 1.36
SYNM-204ENST00000594047 TRIM44Q96DX7 344 aaPredicted RBP23.56■■□□□ 1.36
SYNM-204ENST00000594047 KANK1Q14678 1352 aa23.55■■□□□ 1.36
SYNM-204ENST00000594047 CCNB3Q8WWL7 1395 aa23.55■■□□□ 1.36
SYNM-204ENST00000594047 GOLGA6L22H0YM25 854 aa23.55■■□□□ 1.36
SYNM-204ENST00000594047 MORC1Q86VD1 984 aa23.54■■□□□ 1.36
SYNM-204ENST00000594047 HDGFP51858 240 aaKnown RBP23.53■■□□□ 1.36
SYNM-204ENST00000594047 G3V3G9 751 aa23.53■■□□□ 1.36
SYNM-204ENST00000594047 DCAF8Q5TAQ9 597 aa23.53■■□□□ 1.36
SYNM-204ENST00000594047 PDE4CQ08493 712 aa23.52■■□□□ 1.36
SYNM-204ENST00000594047 KLHL34Q8N239 644 aa23.52■■□□□ 1.36
SYNM-204ENST00000594047 TMX4Q9H1E5 349 aaPredicted RBP23.5■■□□□ 1.35
SYNM-204ENST00000594047 PHF23Q9BUL5 403 aaPredicted RBP23.49■■□□□ 1.35
SYNM-204ENST00000594047 HSP90AB1P08238 724 aaKnown RBP23.48■■□□□ 1.35
SYNM-204ENST00000594047 CEP162Q5TB80 1403 aa23.45■■□□□ 1.34
SYNM-204ENST00000594047 TMF1P82094 1093 aa23.44■■□□□ 1.34
SYNM-204ENST00000594047 PRM3Q9NNZ6 103 aa23.44■■□□□ 1.34
SYNM-204ENST00000594047 GNL2Q13823 731 aaKnown RBP23.42■■□□□ 1.34
SYNM-204ENST00000594047 ERICH6BQ5W0A0 696 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms