RNA–Protein interactions for RNA: ENST00000591994.1

RPRD1A-210, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 2

Gene RPRD1A, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-210ENST00000591994 CCDC61Q9Y6R9 512 aa7.73□□□□□ -1.17
RPRD1A-210ENST00000591994 SGIP1Q9BQI5 828 aa7.7□□□□□ -1.18
RPRD1A-210ENST00000591994 KIF12Q96FN5 646 aa7.69□□□□□ -1.18
RPRD1A-210ENST00000591994 RASEFQ8IZ41 740 aa7.69□□□□□ -1.18
RPRD1A-210ENST00000591994 MS4A3Q96HJ5 214 aa7.69□□□□□ -1.18
RPRD1A-210ENST00000591994 FAM212AQ96EL1 285 aa7.68□□□□□ -1.18
RPRD1A-210ENST00000591994 NUBP1P53384 320 aa7.68□□□□□ -1.18
RPRD1A-210ENST00000591994 ASTLQ6HA08 431 aaPredicted RBP7.67□□□□□ -1.18
RPRD1A-210ENST00000591994 SLC39A7Q92504 469 aa7.66□□□□□ -1.18
RPRD1A-210ENST00000591994 C7P10643 843 aa7.64□□□□□ -1.19
RPRD1A-210ENST00000591994 ATMINO43313 823 aaPredicted RBP7.64□□□□□ -1.19
RPRD1A-210ENST00000591994 TIE1P35590 1138 aa7.63□□□□□ -1.19
RPRD1A-210ENST00000591994 VASPP50552 380 aaPredicted RBP7.63□□□□□ -1.19
RPRD1A-210ENST00000591994 MAP3K13O43283 966 aa7.61□□□□□ -1.19
RPRD1A-210ENST00000591994 GSE1Q14687 1217 aa7.6□□□□□ -1.19
RPRD1A-210ENST00000591994 KLHL34Q8N239 644 aa7.6□□□□□ -1.19
RPRD1A-210ENST00000591994 DCAF8Q5TAQ9 597 aa7.59□□□□□ -1.19
RPRD1A-210ENST00000591994 PCDHB13Q9Y5F0 798 aa7.58□□□□□ -1.2
RPRD1A-210ENST00000591994 MAMSTRQ6ZN01 415 aa7.58□□□□□ -1.2
RPRD1A-210ENST00000591994 PELP1Q8IZL8 1130 aaKnown RBP7.57□□□□□ -1.2
RPRD1A-210ENST00000591994 METRNQ9UJH8 293 aa7.57□□□□□ -1.2
RPRD1A-210ENST00000591994 BMP2KQ9NSY1 1161 aaPredicted RBP7.57□□□□□ -1.2
RPRD1A-210ENST00000591994 ATN1P54259 1190 aaPredicted RBP7.55□□□□□ -1.2
RPRD1A-210ENST00000591994 IER5LQ5T953 404 aa7.55□□□□□ -1.2
RPRD1A-210ENST00000591994 CHRM1P11229 460 aaPredicted RBP7.53□□□□□ -1.2
RPRD1A-210ENST00000591994 SPOCK2Q92563 424 aa7.53□□□□□ -1.2
RPRD1A-210ENST00000591994 TTLL13PA6NNM8 815 aa7.52□□□□□ -1.21
RPRD1A-210ENST00000591994 IFNL1Q8IU54 200 aa7.51□□□□□ -1.21
RPRD1A-210ENST00000591994 ZNF467Q7Z7K2 595 aaPredicted RBP7.5□□□□□ -1.21
RPRD1A-210ENST00000591994 TRPC6Q9Y210 931 aa7.49□□□□□ -1.21
RPRD1A-210ENST00000591994 OTUD5Q96G74 571 aa7.48□□□□□ -1.21
RPRD1A-210ENST00000591994 TMEM106CQ9BVX2 250 aa7.48□□□□□ -1.21
RPRD1A-210ENST00000591994 SCUBE2Q9NQ36 999 aa7.48□□□□□ -1.21
RPRD1A-210ENST00000591994 SEC24BO95487 1268 aa7.47□□□□□ -1.21
RPRD1A-210ENST00000591994 POTEB2H3BUK9 544 aa7.47□□□□□ -1.21
RPRD1A-210ENST00000591994 PYGBP11216 843 aa7.47□□□□□ -1.21
RPRD1A-210ENST00000591994 TRIM41Q8WV44 630 aa7.46□□□□□ -1.21
RPRD1A-210ENST00000591994 TRIM35Q9UPQ4 493 aa7.46□□□□□ -1.21
RPRD1A-210ENST00000591994 IFNLR1Q8IU57 520 aaPredicted RBP7.44□□□□□ -1.22
RPRD1A-210ENST00000591994 PLCG2P16885 1265 aa7.42□□□□□ -1.22
RPRD1A-210ENST00000591994 PCDHB8Q9UN66 801 aa7.41□□□□□ -1.22
RPRD1A-210ENST00000591994 POTEFA5A3E0 1075 aa7.4□□□□□ -1.22
RPRD1A-210ENST00000591994 CIZ1Q9ULV3 898 aaPredicted RBP7.4□□□□□ -1.22
RPRD1A-210ENST00000591994 POTEJP0CG39 1038 aa7.39□□□□□ -1.23
RPRD1A-210ENST00000591994 OCEL1Q9H607 264 aa7.39□□□□□ -1.23
RPRD1A-210ENST00000591994 GOLGA2Q08379 1002 aa7.38□□□□□ -1.23
RPRD1A-210ENST00000591994 COLQQ9Y215 455 aaPredicted RBP7.38□□□□□ -1.23
RPRD1A-210ENST00000591994 IRX5P78411 483 aaPredicted RBP7.38□□□□□ -1.23
RPRD1A-210ENST00000591994 PDAP1Q13442 181 aaKnown RBP7.38□□□□□ -1.23
RPRD1A-210ENST00000591994 PSEN1P49768 467 aa7.37□□□□□ -1.23
RPRD1A-210ENST00000591994 MKRN3Q13064 507 aaKnown RBP7.36□□□□□ -1.23
RPRD1A-210ENST00000591994 L3MBTL3Q96JM7 780 aaPredicted RBP7.33□□□□□ -1.24
RPRD1A-210ENST00000591994 PCDH10Q9P2E7 1040 aa7.32□□□□□ -1.24
RPRD1A-210ENST00000591994 TAOK2Q9UL54 1235 aa7.3□□□□□ -1.24
RPRD1A-210ENST00000591994 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.29□□□□□ -1.24
RPRD1A-210ENST00000591994 SNPHO15079 494 aa7.28□□□□□ -1.24
RPRD1A-210ENST00000591994 SLAIN1Q8ND83 568 aa7.28□□□□□ -1.24
RPRD1A-210ENST00000591994 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.28□□□□□ -1.244e-7■□□□□ 9.8
RPRD1A-210ENST00000591994 PLSCR2Q9NRY7 297 aa7.26□□□□□ -1.25
RPRD1A-210ENST00000591994 POTEMA6NI47 508 aa7.26□□□□□ -1.25
RPRD1A-210ENST00000591994 ILDR1Q86SU0 546 aaPredicted RBP7.26□□□□□ -1.25
RPRD1A-210ENST00000591994 FAM163AQ96GL9 167 aaPredicted RBP7.26□□□□□ -1.25
RPRD1A-210ENST00000591994 RIOK3O14730 519 aaKnown RBP7.25□□□□□ -1.25
RPRD1A-210ENST00000591994 POTEGQ6S5H5 508 aa7.25□□□□□ -1.25
RPRD1A-210ENST00000591994 PDCD7Q8N8D1 485 aaKnown RBP7.25□□□□□ -1.25
RPRD1A-210ENST00000591994 G3V3G9 751 aa7.24□□□□□ -1.25
RPRD1A-210ENST00000591994 VGFO15240 615 aaPredicted RBP7.24□□□□□ -1.25
RPRD1A-210ENST00000591994 CABP2Q9NPB3 220 aa7.24□□□□□ -1.25
RPRD1A-210ENST00000591994 C3orf67Q6ZVT6 689 aa7.23□□□□□ -1.25
RPRD1A-210ENST00000591994 SOX12O15370 315 aa7.21□□□□□ -1.26
RPRD1A-210ENST00000591994 TMEM121BQ9BXQ6 578 aaPredicted RBP7.19□□□□□ -1.26
RPRD1A-210ENST00000591994 BOLA1Q9Y3E2 137 aa7.18□□□□□ -1.26
RPRD1A-210ENST00000591994 LCE2DQ5TA82 110 aaPredicted RBP7.17□□□□□ -1.26
RPRD1A-210ENST00000591994 EFCAB3Q8N7B9 438 aa7.16□□□□□ -1.26
RPRD1A-210ENST00000591994 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.15□□□□□ -1.26
RPRD1A-210ENST00000591994 ZFP91Q96JP5 570 aaPredicted RBP7.15□□□□□ -1.26
RPRD1A-210ENST00000591994 ST18O60284 1047 aa7.13□□□□□ -1.27
RPRD1A-210ENST00000591994 ECM2O94769 699 aaPredicted RBP7.13□□□□□ -1.27
RPRD1A-210ENST00000591994 RNF25Q96BH1 459 aaPredicted RBP7.13□□□□□ -1.27
RPRD1A-210ENST00000591994 NLRP6P59044 892 aa7.12□□□□□ -1.27
RPRD1A-210ENST00000591994 DPY19L2Q6NUT2 758 aa7.11□□□□□ -1.27
RPRD1A-210ENST00000591994 DOK7Q18PE1 504 aa7.07□□□□□ -1.28
RPRD1A-210ENST00000591994 BCL11BQ9C0K0 894 aaPredicted RBP7.07□□□□□ -1.28
RPRD1A-210ENST00000591994 STK24Q9Y6E0 443 aa7.07□□□□□ -1.28
RPRD1A-210ENST00000591994 CDAN1Q8IWY9 1227 aa7.07□□□□□ -1.28
RPRD1A-210ENST00000591994 PKD2Q13563 968 aa7.06□□□□□ -1.28
RPRD1A-210ENST00000591994 MICALL2Q8IY33 904 aa7.06□□□□□ -1.28
RPRD1A-210ENST00000591994 STK25O00506 426 aa7.05□□□□□ -1.28
RPRD1A-210ENST00000591994 RIMBP2O15034 1052 aa7.05□□□□□ -1.28
RPRD1A-210ENST00000591994 PHF8Q9UPP1 1060 aa7.05□□□□□ -1.28
RPRD1A-210ENST00000591994 MS4A4AQ96JQ5 239 aa7.04□□□□□ -1.28
RPRD1A-210ENST00000591994 ZSWIM6Q9HCJ5 1215 aa7.03□□□□□ -1.28
RPRD1A-210ENST00000591994 EMP3P54852 163 aa7.03□□□□□ -1.28
RPRD1A-210ENST00000591994 ZNF710Q8N1W2 664 aa7.03□□□□□ -1.28
RPRD1A-210ENST00000591994 FBXO22Q8NEZ5 403 aa7.02□□□□□ -1.29
RPRD1A-210ENST00000591994 RGL2O15211 777 aa7.01□□□□□ -1.29
RPRD1A-210ENST00000591994 HOXB3P14651 431 aaPredicted RBP7.01□□□□□ -1.29
RPRD1A-210ENST00000591994 HOXB1P14653 301 aaPredicted RBP7□□□□□ -1.29
RPRD1A-210ENST00000591994 MFRPQ9BY79 579 aa6.99□□□□□ -1.29
RPRD1A-210ENST00000591994 MARVELD3Q96A59 401 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms