RNA–Protein interactions for RNA: ENST00000591764.1

DNMT1-224, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 341 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-224ENST00000591764 PIP4P2Q8N4L2 257 aa15.64■□□□□ 0.09
DNMT1-224ENST00000591764 TRIM41Q8WV44 630 aa15.64■□□□□ 0.09
DNMT1-224ENST00000591764 FANCD2Q9BXW9 1451 aa15.61■□□□□ 0.09
DNMT1-224ENST00000591764 ZNF692Q9BU19 519 aaPredicted RBP15.6■□□□□ 0.09
DNMT1-224ENST00000591764 SSUH2Q9Y2M2 353 aa15.59■□□□□ 0.09
DNMT1-224ENST00000591764 CFTRP13569 1480 aa15.56■□□□□ 0.08
DNMT1-224ENST00000591764 FXR2P51116 673 aaKnown RBP eCLIP15.54■□□□□ 0.082e-6■■■□□ 15.9
DNMT1-224ENST00000591764 TOP2AP11388 1531 aaKnown RBP15.52■□□□□ 0.07
DNMT1-224ENST00000591764 RSF1Q96T23 1441 aaPredicted RBP15.48■□□□□ 0.07
DNMT1-224ENST00000591764 CLEC11AQ9Y240 323 aa15.46■□□□□ 0.07
DNMT1-224ENST00000591764 PRDM2Q13029 1718 aa15.46■□□□□ 0.06
DNMT1-224ENST00000591764 URB2Q14146 1524 aaKnown RBP15.45■□□□□ 0.06
DNMT1-224ENST00000591764 SPDYE1Q8NFV5 336 aaPredicted RBP15.44■□□□□ 0.06
DNMT1-224ENST00000591764 IFT140Q96RY7 1462 aa15.36■□□□□ 0.05
DNMT1-224ENST00000591764 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
DNMT1-224ENST00000591764 PRKAR2AP13861 404 aaKnown RBP15.31■□□□□ 0.04
DNMT1-224ENST00000591764 RIMBP3CA6NJZ7 1639 aa15.3■□□□□ 0.04
DNMT1-224ENST00000591764 RIMBP3BA6NNM3 1639 aa15.3■□□□□ 0.04
DNMT1-224ENST00000591764 HAX1O00165 279 aa15.3■□□□□ 0.04
DNMT1-224ENST00000591764 SP7Q8TDD2 431 aaPredicted RBP15.3■□□□□ 0.04
DNMT1-224ENST00000591764 RIMBP3Q9UFD9 1639 aa15.3■□□□□ 0.04
DNMT1-224ENST00000591764 CCDC88BA6NC98 1476 aa15.29■□□□□ 0.04
DNMT1-224ENST00000591764 TOPBP1Q92547 1522 aa15.28■□□□□ 0.04
DNMT1-224ENST00000591764 ZNF608Q9ULD9 1512 aaPredicted RBP15.27■□□□□ 0.04
DNMT1-224ENST00000591764 ARHGEF11O15085 1522 aa15.25■□□□□ 0.03
DNMT1-224ENST00000591764 EIF4G3O43432 1585 aaKnown RBP15.24■□□□□ 0.03
DNMT1-224ENST00000591764 DNMBPQ6XZF7 1577 aa15.24■□□□□ 0.03
DNMT1-224ENST00000591764 CHADLQ6NUI6 762 aa15.22■□□□□ 0.03
DNMT1-224ENST00000591764 EVX2Q03828 476 aa15.21■□□□□ 0.03
DNMT1-224ENST00000591764 PRR29P0C7W0 189 aa15.19■□□□□ 0.02
DNMT1-224ENST00000591764 CHD1O14646 1710 aa15.15■□□□□ 0.02
DNMT1-224ENST00000591764 TARBP1Q13395 1621 aaKnown RBP15.14■□□□□ 0.01
DNMT1-224ENST00000591764 SPDYE4A6NLX3 237 aa15.12■□□□□ 0.01
DNMT1-224ENST00000591764 CYB5RLQ6IPT4 315 aa15.12■□□□□ 0.01
DNMT1-224ENST00000591764 AQRO60306 1485 aaKnown RBP eCLIP15.12■□□□□ 0.014e-14■■■■■ 38.1
DNMT1-224ENST00000591764 POLA1P09884 1462 aaPredicted RBP15.11■□□□□ 0.01
DNMT1-224ENST00000591764 WDR97A6NE52 1622 aa15.09■□□□□ 0.01
DNMT1-224ENST00000591764 ARAP1Q96P48 1450 aa15.06■□□□□ 0
DNMT1-224ENST00000591764 C19orf67A6NJJ6 358 aa15.05■□□□□ -0
DNMT1-224ENST00000591764 SOGA1O94964 1423 aa15.05■□□□□ -0
DNMT1-224ENST00000591764 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
DNMT1-224ENST00000591764 SYNJ1O43426 1573 aa15.01□□□□□ -0.01
DNMT1-224ENST00000591764 SNAPC4Q5SXM2 1469 aa15.01□□□□□ -0.01
DNMT1-224ENST00000591764 MAGI1Q96QZ7 1491 aaPredicted RBP15.01□□□□□ -0.01
DNMT1-224ENST00000591764 TDRD9Q8NDG6 1382 aaKnown RBP15□□□□□ -0.01
DNMT1-224ENST00000591764 FGD5Q6ZNL6 1462 aa15□□□□□ -0.01
DNMT1-224ENST00000591764 CHMP7Q8WUX9 453 aaPredicted RBP14.99□□□□□ -0.01
DNMT1-224ENST00000591764 GRIN2BQ13224 1484 aa14.97□□□□□ -0.01
DNMT1-224ENST00000591764 CLASP1Q7Z460 1538 aa14.97□□□□□ -0.01
DNMT1-224ENST00000591764 SYNJ2O15056 1496 aa14.94□□□□□ -0.02
DNMT1-224ENST00000591764 CUX1P39880 1505 aa14.93□□□□□ -0.02
DNMT1-224ENST00000591764 FARP1Q9Y4F1 1045 aaPredicted RBP14.93□□□□□ -0.02
DNMT1-224ENST00000591764 STAG3Q9UJ98 1225 aa14.92□□□□□ -0.02
DNMT1-224ENST00000591764 CREBZFQ9NS37 354 aa14.89□□□□□ -0.03
DNMT1-224ENST00000591764 PBRM1Q86U86 1689 aa14.89□□□□□ -0.03
DNMT1-224ENST00000591764 GAPVD1Q14C86 1478 aa14.88□□□□□ -0.03
DNMT1-224ENST00000591764 ABCA10Q8WWZ4 1543 aa14.83□□□□□ -0.04
DNMT1-224ENST00000591764 ABCA5Q8WWZ7 1642 aa14.82□□□□□ -0.04
DNMT1-224ENST00000591764 CD44P16070 742 aaKnown RBP14.82□□□□□ -0.04
DNMT1-224ENST00000591764 GABBR2O75899 941 aa14.81□□□□□ -0.04
DNMT1-224ENST00000591764 PROM2Q8N271 834 aa14.79□□□□□ -0.04
DNMT1-224ENST00000591764 WRNQ14191 1432 aaPredicted RBP eCLIP14.77□□□□□ -0.04
DNMT1-224ENST00000591764 GRIN2AQ12879 1464 aa14.76□□□□□ -0.05
DNMT1-224ENST00000591764 ADAMTS12P58397 1594 aa14.73□□□□□ -0.05
DNMT1-224ENST00000591764 NUP160Q12769 1436 aa14.7□□□□□ -0.06
DNMT1-224ENST00000591764 CEP170Q5SW79 1584 aa14.69□□□□□ -0.06
DNMT1-224ENST00000591764 FHAD1B1AJZ9 1412 aa14.69□□□□□ -0.06
DNMT1-224ENST00000591764 TOP2BQ02880 1626 aa14.69□□□□□ -0.06
DNMT1-224ENST00000591764 BIVM-ERCC5R4GMW8 1640 aa14.68□□□□□ -0.06
DNMT1-224ENST00000591764 ERICH3Q5RHP9 1530 aa14.67□□□□□ -0.06
DNMT1-224ENST00000591764 SUPT5HO00267 1087 aaKnown RBP14.67□□□□□ -0.06
DNMT1-224ENST00000591764 MNX1P50219 401 aaPredicted RBP14.66□□□□□ -0.06
DNMT1-224ENST00000591764 SHROOM2Q13796 1616 aa14.66□□□□□ -0.06
DNMT1-224ENST00000591764 ERCC6L2Q5T890 1561 aa14.64□□□□□ -0.07
DNMT1-224ENST00000591764 ZRANB1Q9UGI0 708 aa14.63□□□□□ -0.07
DNMT1-224ENST00000591764 ZNF579Q8NAF0 562 aaKnown RBP14.59□□□□□ -0.07
DNMT1-224ENST00000591764 PRG4Q92954 1404 aaPredicted RBP14.58□□□□□ -0.08
DNMT1-224ENST00000591764 POTEIP0CG38 1075 aa14.55□□□□□ -0.08
DNMT1-224ENST00000591764 NPM1P06748 294 aaKnown RBP eCLIP14.54□□□□□ -0.08
DNMT1-224ENST00000591764 JPH4Q96JJ6 628 aa14.54□□□□□ -0.08
DNMT1-224ENST00000591764 KIF13AQ9H1H9 1805 aa14.54□□□□□ -0.08
DNMT1-224ENST00000591764 RUSC2Q8N2Y8 1516 aa14.53□□□□□ -0.08
DNMT1-224ENST00000591764 FKBP8Q14318 412 aa14.51□□□□□ -0.09
DNMT1-224ENST00000591764 MAPKBP1O60336 1514 aa14.5□□□□□ -0.09
DNMT1-224ENST00000591764 PHF12Q96QT6 1004 aa14.48□□□□□ -0.09
DNMT1-224ENST00000591764 ABCC10Q5T3U5 1492 aa14.48□□□□□ -0.09
DNMT1-224ENST00000591764 CLCN6P51797 869 aa14.47□□□□□ -0.09
DNMT1-224ENST00000591764 FAM69CQ0P6D2 419 aa14.47□□□□□ -0.09
DNMT1-224ENST00000591764 CUL7Q14999 1698 aa14.46□□□□□ -0.1
DNMT1-224ENST00000591764 PAK3O75914 559 aaPredicted RBP14.45□□□□□ -0.1
DNMT1-224ENST00000591764 GALR2O43603 387 aaPredicted RBP14.44□□□□□ -0.1
DNMT1-224ENST00000591764 KIAA0586Q9BVV6 1533 aa14.44□□□□□ -0.1
DNMT1-224ENST00000591764 DIP2BQ9P265 1576 aa14.43□□□□□ -0.1
DNMT1-224ENST00000591764 ADCY10Q96PN6 1610 aa14.43□□□□□ -0.1
DNMT1-224ENST00000591764 KIF27Q86VH2 1401 aa14.42□□□□□ -0.1
DNMT1-224ENST00000591764 MIER1Q8N108 512 aa14.4□□□□□ -0.1
DNMT1-224ENST00000591764 KDM6BO15054 1643 aa14.4□□□□□ -0.1
DNMT1-224ENST00000591764 DCBLD2Q96PD2 775 aa14.38□□□□□ -0.11
DNMT1-224ENST00000591764 IGF1RP08069 1367 aa14.36□□□□□ -0.11
DNMT1-224ENST00000591764 CARMIL2Q6F5E8 1435 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms