RNA–Protein interactions for RNA: ENST00000589887.1

E2F3P1-201, Transcript of E2F transcription factor 3 pseudogene 1, humanhuman

BASIC

Gene E2F3P1, Length 1,230 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3P1-201ENST00000589887 KIF21AQ7Z4S6 1674 aa17.37■□□□□ 0.37
E2F3P1-201ENST00000589887 PRKAR2AP13861 404 aaKnown RBP17.35■□□□□ 0.37
E2F3P1-201ENST00000589887 PRR29P0C7W0 189 aa17.34■□□□□ 0.37
E2F3P1-201ENST00000589887 PROM2Q8N271 834 aa17.34■□□□□ 0.37
E2F3P1-201ENST00000589887 STAG3Q9UJ98 1225 aa17.28■□□□□ 0.36
E2F3P1-201ENST00000589887 WIZO95785 1651 aa17.21■□□□□ 0.35
E2F3P1-201ENST00000589887 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.34
E2F3P1-201ENST00000589887 CHADLQ6NUI6 762 aa17.19■□□□□ 0.34
E2F3P1-201ENST00000589887 HAX1O00165 279 aa17.18■□□□□ 0.34
E2F3P1-201ENST00000589887 SP7Q8TDD2 431 aaPredicted RBP17.17■□□□□ 0.34
E2F3P1-201ENST00000589887 CADPSQ9ULU8 1353 aa17.16■□□□□ 0.34
E2F3P1-201ENST00000589887 WDR62O43379 1518 aa17.14■□□□□ 0.33
E2F3P1-201ENST00000589887 MRC2Q9UBG0 1479 aa17.13■□□□□ 0.33
E2F3P1-201ENST00000589887 C19orf67A6NJJ6 358 aa17.13■□□□□ 0.33
E2F3P1-201ENST00000589887 EVX2Q03828 476 aa17.09■□□□□ 0.33
E2F3P1-201ENST00000589887 CREBZFQ9NS37 354 aa17.08■□□□□ 0.32
E2F3P1-201ENST00000589887 FARP1Q9Y4F1 1045 aaPredicted RBP17.06■□□□□ 0.32
E2F3P1-201ENST00000589887 CEP164Q9UPV0 1460 aa17.01■□□□□ 0.31
E2F3P1-201ENST00000589887 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
E2F3P1-201ENST00000589887 CFTRP13569 1480 aa16.99■□□□□ 0.31
E2F3P1-201ENST00000589887 RSF1Q96T23 1441 aaPredicted RBP16.97■□□□□ 0.31
E2F3P1-201ENST00000589887 TOP2AP11388 1531 aaKnown RBP16.96■□□□□ 0.3
E2F3P1-201ENST00000589887 URB2Q14146 1524 aaKnown RBP16.93■□□□□ 0.3
E2F3P1-201ENST00000589887 FKBP8Q14318 412 aa16.92■□□□□ 0.3
E2F3P1-201ENST00000589887 MNX1P50219 401 aaPredicted RBP16.9■□□□□ 0.3
E2F3P1-201ENST00000589887 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
E2F3P1-201ENST00000589887 PRDM2Q13029 1718 aa16.87■□□□□ 0.29
E2F3P1-201ENST00000589887 CD44P16070 742 aaKnown RBP16.82■□□□□ 0.28
E2F3P1-201ENST00000589887 CCDC88BA6NC98 1476 aa16.74■□□□□ 0.27
E2F3P1-201ENST00000589887 ZNF608Q9ULD9 1512 aaPredicted RBP16.73■□□□□ 0.27
E2F3P1-201ENST00000589887 GABBR2O75899 941 aa16.72■□□□□ 0.27
E2F3P1-201ENST00000589887 NPM1P06748 294 aaKnown RBP eCLIP16.72■□□□□ 0.27
E2F3P1-201ENST00000589887 CLCN6P51797 869 aa16.7■□□□□ 0.26
E2F3P1-201ENST00000589887 ZNF579Q8NAF0 562 aaKnown RBP16.69■□□□□ 0.26
E2F3P1-201ENST00000589887 RIMBP3CA6NJZ7 1639 aa16.69■□□□□ 0.26
E2F3P1-201ENST00000589887 RIMBP3BA6NNM3 1639 aa16.69■□□□□ 0.26
E2F3P1-201ENST00000589887 RIMBP3Q9UFD9 1639 aa16.69■□□□□ 0.26
E2F3P1-201ENST00000589887 TOPBP1Q92547 1522 aa16.69■□□□□ 0.26
E2F3P1-201ENST00000589887 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
E2F3P1-201ENST00000589887 EIF4G3O43432 1585 aaKnown RBP16.64■□□□□ 0.25
E2F3P1-201ENST00000589887 DNMBPQ6XZF7 1577 aa16.61■□□□□ 0.25
E2F3P1-201ENST00000589887 ZRANB1Q9UGI0 708 aa16.61■□□□□ 0.25
E2F3P1-201ENST00000589887 TARBP1Q13395 1621 aaKnown RBP16.6■□□□□ 0.25
E2F3P1-201ENST00000589887 MIER1Q8N108 512 aa16.6■□□□□ 0.25
E2F3P1-201ENST00000589887 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
E2F3P1-201ENST00000589887 CHD1O14646 1710 aa16.57■□□□□ 0.24
E2F3P1-201ENST00000589887 ABCC8Q09428 1581 aa16.55■□□□□ 0.24
E2F3P1-201ENST00000589887 PLEKHG5O94827 1062 aa16.55■□□□□ 0.24
E2F3P1-201ENST00000589887 FBXO3Q9UK99 471 aa16.55■□□□□ 0.24
E2F3P1-201ENST00000589887 PAK3O75914 559 aaPredicted RBP16.53■□□□□ 0.24
E2F3P1-201ENST00000589887 AQRO60306 1485 aaKnown RBP eCLIP16.51■□□□□ 0.23
E2F3P1-201ENST00000589887 POLA1P09884 1462 aaPredicted RBP16.51■□□□□ 0.23
E2F3P1-201ENST00000589887 PLCD3Q8N3E9 789 aa16.49■□□□□ 0.23
E2F3P1-201ENST00000589887 ZBTB47Q9UFB7 747 aaPredicted RBP16.45■□□□□ 0.22
E2F3P1-201ENST00000589887 RAD54L2Q9Y4B4 1467 aa16.45■□□□□ 0.22
E2F3P1-201ENST00000589887 ARAP1Q96P48 1450 aa16.44■□□□□ 0.22
E2F3P1-201ENST00000589887 SUPT5HO00267 1087 aaKnown RBP16.42■□□□□ 0.22
E2F3P1-201ENST00000589887 POTEIP0CG38 1075 aa16.42■□□□□ 0.22
E2F3P1-201ENST00000589887 PHF12Q96QT6 1004 aa16.42■□□□□ 0.22
E2F3P1-201ENST00000589887 CCDC61Q9Y6R9 512 aa16.41■□□□□ 0.22
E2F3P1-201ENST00000589887 NUBP1P53384 320 aa16.39■□□□□ 0.21
E2F3P1-201ENST00000589887 RASEFQ8IZ41 740 aa16.39■□□□□ 0.21
E2F3P1-201ENST00000589887 CUX1P39880 1505 aa16.38■□□□□ 0.21
E2F3P1-201ENST00000589887 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
E2F3P1-201ENST00000589887 CLASP1Q7Z460 1538 aa16.37■□□□□ 0.21
E2F3P1-201ENST00000589887 GALR2O43603 387 aaPredicted RBP16.37■□□□□ 0.21
E2F3P1-201ENST00000589887 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
E2F3P1-201ENST00000589887 TDRD9Q8NDG6 1382 aaKnown RBP16.37■□□□□ 0.21
E2F3P1-201ENST00000589887 CYB5RLQ6IPT4 315 aa16.36■□□□□ 0.21
E2F3P1-201ENST00000589887 SOGA1O94964 1423 aa16.36■□□□□ 0.21
E2F3P1-201ENST00000589887 SNAPC4Q5SXM2 1469 aa16.35■□□□□ 0.21
E2F3P1-201ENST00000589887 VASPP50552 380 aaPredicted RBP16.35■□□□□ 0.21
E2F3P1-201ENST00000589887 TSPYL2Q9H2G4 693 aaPredicted RBP16.35■□□□□ 0.21
E2F3P1-201ENST00000589887 MAGI1Q96QZ7 1491 aaPredicted RBP16.29■□□□□ 0.2
E2F3P1-201ENST00000589887 PBRM1Q86U86 1689 aa16.27■□□□□ 0.2
E2F3P1-201ENST00000589887 KIF12Q96FN5 646 aa16.27■□□□□ 0.2
E2F3P1-201ENST00000589887 SYNJ1O43426 1573 aa16.26■□□□□ 0.19
E2F3P1-201ENST00000589887 GRIN2BQ13224 1484 aa16.25■□□□□ 0.19
E2F3P1-201ENST00000589887 MS4A3Q96HJ5 214 aa16.25■□□□□ 0.19
E2F3P1-201ENST00000589887 DCBLD2Q96PD2 775 aa16.25■□□□□ 0.19
E2F3P1-201ENST00000589887 SYNJ2O15056 1496 aa16.23■□□□□ 0.19
E2F3P1-201ENST00000589887 ABCA5Q8WWZ7 1642 aa16.23■□□□□ 0.19
E2F3P1-201ENST00000589887 GAPVD1Q14C86 1478 aa16.19■□□□□ 0.18
E2F3P1-201ENST00000589887 ABCA10Q8WWZ4 1543 aa16.18■□□□□ 0.18
E2F3P1-201ENST00000589887 CHMP7Q8WUX9 453 aaPredicted RBP16.17■□□□□ 0.18
E2F3P1-201ENST00000589887 FAM212AQ96EL1 285 aa16.16■□□□□ 0.18
E2F3P1-201ENST00000589887 SGIP1Q9BQI5 828 aa16.16■□□□□ 0.18
E2F3P1-201ENST00000589887 ASTLQ6HA08 431 aaPredicted RBP16.15■□□□□ 0.18
E2F3P1-201ENST00000589887 MAP3K13O43283 966 aa16.14■□□□□ 0.17
E2F3P1-201ENST00000589887 ERCC6L2Q5T890 1561 aa16.13■□□□□ 0.17
E2F3P1-201ENST00000589887 ADAMTS12P58397 1594 aa16.1■□□□□ 0.17
E2F3P1-201ENST00000589887 IFNLR1Q8IU57 520 aaPredicted RBP16.1■□□□□ 0.17
E2F3P1-201ENST00000589887 BIVM-ERCC5R4GMW8 1640 aa16.09■□□□□ 0.17
E2F3P1-201ENST00000589887 ATMINO43313 823 aaPredicted RBP16.08■□□□□ 0.16
E2F3P1-201ENST00000589887 LHX8Q68G74 356 aa16.08■□□□□ 0.16
E2F3P1-201ENST00000589887 GRIN2AQ12879 1464 aa16.08■□□□□ 0.16
E2F3P1-201ENST00000589887 CEP170Q5SW79 1584 aa16.08■□□□□ 0.16
E2F3P1-201ENST00000589887 PELP1Q8IZL8 1130 aaKnown RBP16.06■□□□□ 0.16
E2F3P1-201ENST00000589887 TOP2BQ02880 1626 aa16.05■□□□□ 0.16
E2F3P1-201ENST00000589887 NUP160Q12769 1436 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms