RNA–Protein interactions for RNA: ENST00000589887.1

E2F3P1-201, Transcript of E2F transcription factor 3 pseudogene 1, humanhuman

BASIC

Gene E2F3P1, Length 1,230 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3P1-201ENST00000589887 AEBP2Q6ZN18 517 aaPredicted RBP32.91■■■□□ 2.86
E2F3P1-201ENST00000589887 CHIC1Q5VXU3 224 aa31.6■■■□□ 2.65
E2F3P1-201ENST00000589887 SENP3Q9H4L4 574 aaPredicted RBP28.01■■■□□ 2.07
E2F3P1-201ENST00000589887 PHF23Q9BUL5 403 aaPredicted RBP27.73■■■□□ 2.03
E2F3P1-201ENST00000589887 FOXD1Q16676 465 aa26.06■■□□□ 1.76
E2F3P1-201ENST00000589887 PLPPR3Q6T4P5 718 aa25.35■■□□□ 1.65
E2F3P1-201ENST00000589887 PPP6R1Q9UPN7 881 aa24.61■■□□□ 1.53
E2F3P1-201ENST00000589887 ADRA2BP18089 450 aa24.49■■□□□ 1.51
E2F3P1-201ENST00000589887 PIAS4Q8N2W9 510 aaPredicted RBP24.34■■□□□ 1.49
E2F3P1-201ENST00000589887 MSH5O43196 834 aa24.26■■□□□ 1.47
E2F3P1-201ENST00000589887 POTEDQ86YR6 584 aa23.09■■□□□ 1.29
E2F3P1-201ENST00000589887 NISCHQ9Y2I1 1504 aa22.57■■□□□ 1.2
E2F3P1-201ENST00000589887 SCAF1Q9H7N4 1312 aaKnown RBP22.44■■□□□ 1.18
E2F3P1-201ENST00000589887 MAPK8IP2Q13387 824 aaPredicted RBP22.39■■□□□ 1.17
E2F3P1-201ENST00000589887 DMRT2Q9Y5R5 561 aa22.3■■□□□ 1.16
E2F3P1-201ENST00000589887 PPP4R3CPQ6ZMV5 832 aa22.24■■□□□ 1.15
E2F3P1-201ENST00000589887 CNKSR2Q8WXI2 1034 aa21.78■■□□□ 1.08
E2F3P1-201ENST00000589887 HOXD11P31277 338 aaPredicted RBP21.65■■□□□ 1.06
E2F3P1-201ENST00000589887 RNF216Q9NWF9 866 aaPredicted RBP21.54■■□□□ 1.04
E2F3P1-201ENST00000589887 NCBP3Q53F19 620 aaKnown RBP21.48■■□□□ 1.03
E2F3P1-201ENST00000589887 NPM3O75607 178 aaKnown RBP21.2■□□□□ 0.98
E2F3P1-201ENST00000589887 DCAF8L1A6NGE4 600 aa21.09■□□□□ 0.97
E2F3P1-201ENST00000589887 KCNA4P22459 653 aa21.05■□□□□ 0.96
E2F3P1-201ENST00000589887 DNAJC5BQ9UF47 199 aa20.97■□□□□ 0.95
E2F3P1-201ENST00000589887 RNF39Q9H2S5 420 aa20.77■□□□□ 0.92
E2F3P1-201ENST00000589887 CACNB1Q02641 598 aaPredicted RBP20.5■□□□□ 0.87
E2F3P1-201ENST00000589887 C1QBPQ07021 282 aaKnown RBP20.48■□□□□ 0.87
E2F3P1-201ENST00000589887 ABCC9O60706 1549 aa20.43■□□□□ 0.86
E2F3P1-201ENST00000589887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.43■□□□□ 0.86
E2F3P1-201ENST00000589887 CCDC180Q9P1Z9 1646 aa20.35■□□□□ 0.85
E2F3P1-201ENST00000589887 SLC4A2P04920 1241 aa20.2■□□□□ 0.82
E2F3P1-201ENST00000589887 U3KPZ7 1027 aaPredicted RBP20.16■□□□□ 0.82
E2F3P1-201ENST00000589887 SLC4A1APQ9BWU0 796 aaKnown RBP19.9■□□□□ 0.78
E2F3P1-201ENST00000589887 SPINK5Q9NQ38 1064 aaPredicted RBP19.71■□□□□ 0.75
E2F3P1-201ENST00000589887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.69■□□□□ 0.74
E2F3P1-201ENST00000589887 HNRNPUL2Q1KMD3 747 aaKnown RBP19.69■□□□□ 0.74
E2F3P1-201ENST00000589887 MYCNP04198 464 aaPredicted RBP19.6■□□□□ 0.73
E2F3P1-201ENST00000589887 APLP2Q06481 763 aa19.6■□□□□ 0.73
E2F3P1-201ENST00000589887 SAMD1Q6SPF0 538 aaPredicted RBP19.59■□□□□ 0.73
E2F3P1-201ENST00000589887 CAPN15O75808 1086 aa19.57■□□□□ 0.72
E2F3P1-201ENST00000589887 FOXD4L1Q9NU39 408 aa19.57■□□□□ 0.72
E2F3P1-201ENST00000589887 DSG3P32926 999 aa19.54■□□□□ 0.72
E2F3P1-201ENST00000589887 ZNF219Q9P2Y4 722 aaPredicted RBP19.43■□□□□ 0.7
E2F3P1-201ENST00000589887 ZBTB22O15209 634 aa19.41■□□□□ 0.7
E2F3P1-201ENST00000589887 RB1CC1Q8TDY2 1594 aa19.38■□□□□ 0.69
E2F3P1-201ENST00000589887 TRHP20396 242 aaPredicted RBP19.32■□□□□ 0.68
E2F3P1-201ENST00000589887 NACADO15069 1562 aa19.23■□□□□ 0.67
E2F3P1-201ENST00000589887 ABCB7O75027 752 aa19.13■□□□□ 0.65
E2F3P1-201ENST00000589887 ATF5Q9Y2D1 282 aaPredicted RBP19.1■□□□□ 0.65
E2F3P1-201ENST00000589887 UNC13AQ9UPW8 1703 aa19.1■□□□□ 0.65
E2F3P1-201ENST00000589887 ATXN8OSP0DMR3 200 aa19.03■□□□□ 0.64
E2F3P1-201ENST00000589887 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
E2F3P1-201ENST00000589887 POLA2Q14181 598 aa18.95■□□□□ 0.62
E2F3P1-201ENST00000589887 BICRAQ9NZM4 1560 aa18.94■□□□□ 0.62
E2F3P1-201ENST00000589887 MYO15BQ96JP2 1530 aa18.94■□□□□ 0.62
E2F3P1-201ENST00000589887 DCAF8L2P0C7V8 631 aa18.91■□□□□ 0.62
E2F3P1-201ENST00000589887 CSRNP3Q8WYN3 585 aa18.81■□□□□ 0.6
E2F3P1-201ENST00000589887 ZCCHC6Q5VYS8 1495 aaKnown RBP18.71■□□□□ 0.59
E2F3P1-201ENST00000589887 ZBTB12Q9Y330 459 aaPredicted RBP18.67■□□□□ 0.58
E2F3P1-201ENST00000589887 DCAF1Q9Y4B6 1507 aa18.64■□□□□ 0.58
E2F3P1-201ENST00000589887 RBM42Q9BTD8 480 aaKnown RBP18.61■□□□□ 0.57
E2F3P1-201ENST00000589887 SHROOM4Q9ULL8 1493 aa18.57■□□□□ 0.56
E2F3P1-201ENST00000589887 EHMT2Q96KQ7 1210 aa18.54■□□□□ 0.56
E2F3P1-201ENST00000589887 SCRIBQ14160 1630 aa18.52■□□□□ 0.55
E2F3P1-201ENST00000589887 CC2D2AQ9P2K1 1620 aa18.5■□□□□ 0.55
E2F3P1-201ENST00000589887 EIF4G1Q04637 1599 aaKnown RBP18.42■□□□□ 0.54
E2F3P1-201ENST00000589887 CECR2Q9BXF3 1484 aa18.41■□□□□ 0.54
E2F3P1-201ENST00000589887 OSCARQ8IYS5 282 aa18.33■□□□□ 0.52
E2F3P1-201ENST00000589887 FBLN2P98095 1184 aa18.28■□□□□ 0.52
E2F3P1-201ENST00000589887 MKRN4PQ13434 485 aaPredicted RBP18.28■□□□□ 0.52
E2F3P1-201ENST00000589887 AKT1S1Q96B36 256 aa18.28■□□□□ 0.52
E2F3P1-201ENST00000589887 SPDYE2BA6NHP3 402 aa18.14■□□□□ 0.49
E2F3P1-201ENST00000589887 SPDYE6P0CI01 402 aa18.14■□□□□ 0.49
E2F3P1-201ENST00000589887 SPDYE2Q495Y8 402 aa18.14■□□□□ 0.49
E2F3P1-201ENST00000589887 POTEHQ6S545 545 aa18.13■□□□□ 0.49
E2F3P1-201ENST00000589887 REM2Q8IYK8 340 aaPredicted RBP18.07■□□□□ 0.48
E2F3P1-201ENST00000589887 CHRDL2Q6WN34 429 aa18.04■□□□□ 0.48
E2F3P1-201ENST00000589887 SSUH2Q9Y2M2 353 aa17.98■□□□□ 0.47
E2F3P1-201ENST00000589887 ZNF692Q9BU19 519 aaPredicted RBP17.87■□□□□ 0.45
E2F3P1-201ENST00000589887 PITPNM1O00562 1244 aa17.85■□□□□ 0.45
E2F3P1-201ENST00000589887 DNAJC5Q9H3Z4 198 aa17.79■□□□□ 0.44
E2F3P1-201ENST00000589887 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
E2F3P1-201ENST00000589887 FXR2P51116 673 aaKnown RBP eCLIP17.72■□□□□ 0.43
E2F3P1-201ENST00000589887 SPDYE1Q8NFV5 336 aaPredicted RBP17.7■□□□□ 0.42
E2F3P1-201ENST00000589887 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
E2F3P1-201ENST00000589887 PIP4P2Q8N4L2 257 aa17.69■□□□□ 0.42
E2F3P1-201ENST00000589887 SMARCA4P51532 1647 aa17.67■□□□□ 0.42
E2F3P1-201ENST00000589887 CUX2O14529 1486 aa17.66■□□□□ 0.42
E2F3P1-201ENST00000589887 HMGXB3Q12766 1538 aa17.64■□□□□ 0.41
E2F3P1-201ENST00000589887 SMARCA2P51531 1590 aa17.6■□□□□ 0.41
E2F3P1-201ENST00000589887 ERCC6Q03468 1493 aa17.58■□□□□ 0.41
E2F3P1-201ENST00000589887 NESP48681 1621 aa17.57■□□□□ 0.4
E2F3P1-201ENST00000589887 SPDYE4A6NLX3 237 aa17.51■□□□□ 0.39
E2F3P1-201ENST00000589887 PEG3Q9GZU2 1588 aa17.51■□□□□ 0.39
E2F3P1-201ENST00000589887 BAZ1AQ9NRL2 1556 aaPredicted RBP17.5■□□□□ 0.39
E2F3P1-201ENST00000589887 CLEC11AQ9Y240 323 aa17.5■□□□□ 0.39
E2F3P1-201ENST00000589887 BAZ1BQ9UIG0 1483 aaKnown RBP17.47■□□□□ 0.39
E2F3P1-201ENST00000589887 THOC2Q8NI27 1593 aaKnown RBP17.46■□□□□ 0.39
E2F3P1-201ENST00000589887 MROH2BQ7Z745 1585 aa17.42■□□□□ 0.38
E2F3P1-201ENST00000589887 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms