RNA–Protein interactions for RNA: ENST00000589208.1

ZNF559-208, Transcript of zinc finger protein 559, humanhuman

TSL 4

Gene ZNF559, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-208ENST00000589208 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
ZNF559-208ENST00000589208 FXR2P51116 673 aaKnown RBP eCLIP12.58□□□□□ -0.4
ZNF559-208ENST00000589208 PIP4P2Q8N4L2 257 aa12.55□□□□□ -0.4
ZNF559-208ENST00000589208 FARP1Q9Y4F1 1045 aaPredicted RBP12.55□□□□□ -0.4
ZNF559-208ENST00000589208 NPM1P06748 294 aaKnown RBP eCLIP12.53□□□□□ -0.4
ZNF559-208ENST00000589208 GSE1Q14687 1217 aa12.53□□□□□ -0.4
ZNF559-208ENST00000589208 FAM212AQ96EL1 285 aa12.52□□□□□ -0.41
ZNF559-208ENST00000589208 RB1CC1Q8TDY2 1594 aa12.49□□□□□ -0.41
ZNF559-208ENST00000589208 TSPYL2Q9H2G4 693 aaPredicted RBP12.47□□□□□ -0.41
ZNF559-208ENST00000589208 RNF25Q96BH1 459 aaPredicted RBP12.45□□□□□ -0.42
ZNF559-208ENST00000589208 SLC24A1O60721 1099 aa12.43□□□□□ -0.42
ZNF559-208ENST00000589208 PYGBP11216 843 aa12.43□□□□□ -0.42
ZNF559-208ENST00000589208 UNC13AQ9UPW8 1703 aa12.39□□□□□ -0.43
ZNF559-208ENST00000589208 BICRAQ9NZM4 1560 aa12.38□□□□□ -0.43
ZNF559-208ENST00000589208 CHGAP10645 457 aaKnown RBP12.35□□□□□ -0.43
ZNF559-208ENST00000589208 RIOK3O14730 519 aaKnown RBP12.32□□□□□ -0.44
ZNF559-208ENST00000589208 CHRM1P11229 460 aaPredicted RBP12.31□□□□□ -0.44
ZNF559-208ENST00000589208 PLCB2Q00722 1185 aa12.3□□□□□ -0.44
ZNF559-208ENST00000589208 CCDC61Q9Y6R9 512 aa12.3□□□□□ -0.44
ZNF559-208ENST00000589208 SOCS7O14512 581 aa12.27□□□□□ -0.45
ZNF559-208ENST00000589208 BBXQ8WY36 941 aaPredicted RBP12.27□□□□□ -0.45
ZNF559-208ENST00000589208 CD44P16070 742 aaKnown RBP12.25□□□□□ -0.45
ZNF559-208ENST00000589208 PAK3O75914 559 aaPredicted RBP12.24□□□□□ -0.45
ZNF559-208ENST00000589208 ZRANB1Q9UGI0 708 aa12.24□□□□□ -0.45
ZNF559-208ENST00000589208 PCDHB8Q9UN66 801 aa12.23□□□□□ -0.45
ZNF559-208ENST00000589208 PCDHB13Q9Y5F0 798 aa12.23□□□□□ -0.45
ZNF559-208ENST00000589208 CCDC180Q9P1Z9 1646 aa12.22□□□□□ -0.45
ZNF559-208ENST00000589208 VGFO15240 615 aaPredicted RBP12.22□□□□□ -0.45
ZNF559-208ENST00000589208 PAXIP1Q6ZW49 1069 aaPredicted RBP12.22□□□□□ -0.45
ZNF559-208ENST00000589208 HS6ST3Q8IZP7 471 aa12.22□□□□□ -0.45
ZNF559-208ENST00000589208 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.21□□□□□ -0.45
ZNF559-208ENST00000589208 ZFP91Q96JP5 570 aaPredicted RBP12.21□□□□□ -0.45
ZNF559-208ENST00000589208 CFAP44Q96MT7 982 aa12.21□□□□□ -0.45
ZNF559-208ENST00000589208 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.21□□□□□ -0.45
ZNF559-208ENST00000589208 STK25O00506 426 aa12.2□□□□□ -0.46
ZNF559-208ENST00000589208 LMTK3Q96Q04 1460 aa12.2□□□□□ -0.46
ZNF559-208ENST00000589208 MAP3K13O43283 966 aa12.18□□□□□ -0.46
ZNF559-208ENST00000589208 HAP1P54257 671 aaPredicted RBP12.18□□□□□ -0.46
ZNF559-208ENST00000589208 PHF12Q96QT6 1004 aa12.18□□□□□ -0.46
ZNF559-208ENST00000589208 KIF12Q96FN5 646 aa12.17□□□□□ -0.46
ZNF559-208ENST00000589208 BCL11BQ9C0K0 894 aaPredicted RBP12.16□□□□□ -0.46
ZNF559-208ENST00000589208 TAOK2Q9UL54 1235 aa12.16□□□□□ -0.46
ZNF559-208ENST00000589208 STK24Q9Y6E0 443 aa12.16□□□□□ -0.46
ZNF559-208ENST00000589208 C19orf67A6NJJ6 358 aa12.15□□□□□ -0.46
ZNF559-208ENST00000589208 POTEHQ6S545 545 aa12.15□□□□□ -0.46
ZNF559-208ENST00000589208 ILDR2Q71H61 639 aa12.15□□□□□ -0.46
ZNF559-208ENST00000589208 ZNF467Q7Z7K2 595 aaPredicted RBP12.15□□□□□ -0.46
ZNF559-208ENST00000589208 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
ZNF559-208ENST00000589208 IFNL1Q8IU54 200 aa12.14□□□□□ -0.47
ZNF559-208ENST00000589208 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
ZNF559-208ENST00000589208 SGIP1Q9BQI5 828 aa12.12□□□□□ -0.47
ZNF559-208ENST00000589208 EIF4G1Q04637 1599 aaKnown RBP12.12□□□□□ -0.47
ZNF559-208ENST00000589208 ZNF579Q8NAF0 562 aaKnown RBP12.11□□□□□ -0.47
ZNF559-208ENST00000589208 SPRYD3Q8NCJ5 442 aa12.11□□□□□ -0.47
ZNF559-208ENST00000589208 PDAP1Q13442 181 aaKnown RBP12.09□□□□□ -0.47
ZNF559-208ENST00000589208 PSEN1P49768 467 aa12.08□□□□□ -0.48
ZNF559-208ENST00000589208 EVX2Q03828 476 aa12.07□□□□□ -0.48
ZNF559-208ENST00000589208 HAX1O00165 279 aa12.06□□□□□ -0.48
ZNF559-208ENST00000589208 TRPC6Q9Y210 931 aa12.04□□□□□ -0.48
ZNF559-208ENST00000589208 RIMBP3CA6NJZ7 1639 aa12.04□□□□□ -0.48
ZNF559-208ENST00000589208 RIMBP3BA6NNM3 1639 aa12.04□□□□□ -0.48
ZNF559-208ENST00000589208 RIMBP3Q9UFD9 1639 aa12.04□□□□□ -0.48
ZNF559-208ENST00000589208 MS4A3Q96HJ5 214 aa12.03□□□□□ -0.48
ZNF559-208ENST00000589208 TSHZ2Q9NRE2 1034 aa12.02□□□□□ -0.49
ZNF559-208ENST00000589208 GTPBP6O43824 516 aaPredicted RBP12.01□□□□□ -0.49
ZNF559-208ENST00000589208 NACADO15069 1562 aa11.97□□□□□ -0.49
ZNF559-208ENST00000589208 CABP2Q9NPB3 220 aa11.96□□□□□ -0.49
ZNF559-208ENST00000589208 GALR2O43603 387 aaPredicted RBP11.94□□□□□ -0.5
ZNF559-208ENST00000589208 FBXO41Q8TF61 875 aa11.94□□□□□ -0.5
ZNF559-208ENST00000589208 EFCAB3Q8N7B9 438 aa11.93□□□□□ -0.5
ZNF559-208ENST00000589208 KDM2AQ9Y2K7 1162 aa11.93□□□□□ -0.5
ZNF559-208ENST00000589208 TMEM106CQ9BVX2 250 aa11.92□□□□□ -0.5
ZNF559-208ENST00000589208 MFRPQ9BY79 579 aa11.9□□□□□ -0.5
ZNF559-208ENST00000589208 VSIG10Q8N0Z9 540 aa11.89□□□□□ -0.51
ZNF559-208ENST00000589208 PHF8Q9UPP1 1060 aa11.86□□□□□ -0.51
ZNF559-208ENST00000589208 TTLL13PA6NNM8 815 aa11.84□□□□□ -0.51
ZNF559-208ENST00000589208 BMP2KQ9NSY1 1161 aaPredicted RBP11.84□□□□□ -0.51
ZNF559-208ENST00000589208 THOC2Q8NI27 1593 aaKnown RBP11.84□□□□□ -0.51
ZNF559-208ENST00000589208 BAZ1AQ9NRL2 1556 aaPredicted RBP11.81□□□□□ -0.52
ZNF559-208ENST00000589208 PPP1R37O75864 691 aa11.81□□□□□ -0.52
ZNF559-208ENST00000589208 TIE1P35590 1138 aa11.81□□□□□ -0.52
ZNF559-208ENST00000589208 FBXO22Q8NEZ5 403 aa11.81□□□□□ -0.52
ZNF559-208ENST00000589208 GOLGA2Q08379 1002 aa11.8□□□□□ -0.52
ZNF559-208ENST00000589208 RYDENQ9NUL5 291 aaKnown RBP11.8□□□□□ -0.52
ZNF559-208ENST00000589208 SHROOM4Q9ULL8 1493 aa11.79□□□□□ -0.52
ZNF559-208ENST00000589208 SOX12O15370 315 aa11.78□□□□□ -0.52
ZNF559-208ENST00000589208 ARHGEF11O15085 1522 aa11.77□□□□□ -0.52
ZNF559-208ENST00000589208 GABBR2O75899 941 aa11.77□□□□□ -0.53
ZNF559-208ENST00000589208 NLRP6P59044 892 aa11.77□□□□□ -0.53
ZNF559-208ENST00000589208 CYB5RLQ6IPT4 315 aa11.77□□□□□ -0.53
ZNF559-208ENST00000589208 TRIM35Q9UPQ4 493 aa11.77□□□□□ -0.53
ZNF559-208ENST00000589208 MS4A4AQ96JQ5 239 aa11.76□□□□□ -0.53
ZNF559-208ENST00000589208 MKRN3Q13064 507 aaKnown RBP11.75□□□□□ -0.53
ZNF559-208ENST00000589208 CADPS2Q86UW7 1296 aa11.75□□□□□ -0.53
ZNF559-208ENST00000589208 ATN1P54259 1190 aaPredicted RBP11.74□□□□□ -0.53
ZNF559-208ENST00000589208 DISP3Q9P2K9 1392 aa11.71□□□□□ -0.53
ZNF559-208ENST00000589208 KDM4FA0A1W2PPD8 638 aa11.71□□□□□ -0.53
ZNF559-208ENST00000589208 ATMINO43313 823 aaPredicted RBP11.71□□□□□ -0.53
ZNF559-208ENST00000589208 ERCC6L2Q5T890 1561 aa11.71□□□□□ -0.54
ZNF559-208ENST00000589208 CLCN6P51797 869 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms