RNA–Protein interactions for RNA: ENST00000589208.1

ZNF559-208, Transcript of zinc finger protein 559, humanhuman

TSL 4

Gene ZNF559, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-208ENST00000589208 AEBP2Q6ZN18 517 aaPredicted RBP23.67■■□□□ 1.38
ZNF559-208ENST00000589208 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
ZNF559-208ENST00000589208 PHF23Q9BUL5 403 aaPredicted RBP20.61■□□□□ 0.89
ZNF559-208ENST00000589208 SENP3Q9H4L4 574 aaPredicted RBP19.9■□□□□ 0.78
ZNF559-208ENST00000589208 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
ZNF559-208ENST00000589208 FOXD1Q16676 465 aa18.55■□□□□ 0.56
ZNF559-208ENST00000589208 ADRA2BP18089 450 aa18.12■□□□□ 0.49
ZNF559-208ENST00000589208 PPP6R1Q9UPN7 881 aa18.12■□□□□ 0.49
ZNF559-208ENST00000589208 PIAS4Q8N2W9 510 aaPredicted RBP17.54■□□□□ 0.4
ZNF559-208ENST00000589208 MSH5O43196 834 aa16.86■□□□□ 0.29
ZNF559-208ENST00000589208 PPP4R3CPQ6ZMV5 832 aa16.84■□□□□ 0.29
ZNF559-208ENST00000589208 KCNA4P22459 653 aa16.82■□□□□ 0.28
ZNF559-208ENST00000589208 MAPK8IP2Q13387 824 aaPredicted RBP16.39■□□□□ 0.21
ZNF559-208ENST00000589208 NCBP3Q53F19 620 aaKnown RBP16.38■□□□□ 0.21
ZNF559-208ENST00000589208 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
ZNF559-208ENST00000589208 NPM3O75607 178 aaKnown RBP16.25■□□□□ 0.19
ZNF559-208ENST00000589208 CNKSR2Q8WXI2 1034 aa16.25■□□□□ 0.19
ZNF559-208ENST00000589208 SLC4A1APQ9BWU0 796 aaKnown RBP16.01■□□□□ 0.15
ZNF559-208ENST00000589208 EHMT2Q96KQ7 1210 aa15.98■□□□□ 0.15
ZNF559-208ENST00000589208 DMRT2Q9Y5R5 561 aa15.96■□□□□ 0.15
ZNF559-208ENST00000589208 RNF216Q9NWF9 866 aaPredicted RBP15.85■□□□□ 0.13
ZNF559-208ENST00000589208 HOXD11P31277 338 aaPredicted RBP15.72■□□□□ 0.11
ZNF559-208ENST00000589208 POTEDQ86YR6 584 aa15.65■□□□□ 0.1
ZNF559-208ENST00000589208 CSRNP3Q8WYN3 585 aa15.61■□□□□ 0.09
ZNF559-208ENST00000589208 DNAJC5BQ9UF47 199 aa15.55■□□□□ 0.08
ZNF559-208ENST00000589208 ZBTB22O15209 634 aa15.51■□□□□ 0.07
ZNF559-208ENST00000589208 DCAF8L1A6NGE4 600 aa15.36■□□□□ 0.05
ZNF559-208ENST00000589208 FOXD4L1Q9NU39 408 aa15.31■□□□□ 0.04
ZNF559-208ENST00000589208 SLC4A2P04920 1241 aa15.3■□□□□ 0.04
ZNF559-208ENST00000589208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.03■□□□□ -0
ZNF559-208ENST00000589208 MYCNP04198 464 aaPredicted RBP14.94□□□□□ -0.02
ZNF559-208ENST00000589208 DNAJC5Q9H3Z4 198 aa14.93□□□□□ -0.02
ZNF559-208ENST00000589208 U3KPZ7 1027 aaPredicted RBP14.85□□□□□ -0.03
ZNF559-208ENST00000589208 ATF5Q9Y2D1 282 aaPredicted RBP14.67□□□□□ -0.06
ZNF559-208ENST00000589208 ATXN8OSP0DMR3 200 aa14.66□□□□□ -0.06
ZNF559-208ENST00000589208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.59□□□□□ -0.07
ZNF559-208ENST00000589208 HNRNPUL2Q1KMD3 747 aaKnown RBP14.59□□□□□ -0.07
ZNF559-208ENST00000589208 SAMD1Q6SPF0 538 aaPredicted RBP14.59□□□□□ -0.07
ZNF559-208ENST00000589208 RNF39Q9H2S5 420 aa14.53□□□□□ -0.08
ZNF559-208ENST00000589208 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
ZNF559-208ENST00000589208 APLP2Q06481 763 aa14.35□□□□□ -0.11
ZNF559-208ENST00000589208 C1QBPQ07021 282 aaKnown RBP14.32□□□□□ -0.12
ZNF559-208ENST00000589208 TRHP20396 242 aaPredicted RBP14.3□□□□□ -0.12
ZNF559-208ENST00000589208 ZNF219Q9P2Y4 722 aaPredicted RBP14.3□□□□□ -0.12
ZNF559-208ENST00000589208 CAPN15O75808 1086 aa14.29□□□□□ -0.12
ZNF559-208ENST00000589208 POLA2Q14181 598 aa14.11□□□□□ -0.15
ZNF559-208ENST00000589208 ABCB7O75027 752 aa14.1□□□□□ -0.15
ZNF559-208ENST00000589208 FKBP8Q14318 412 aa14.1□□□□□ -0.15
ZNF559-208ENST00000589208 ABCC9O60706 1549 aa14.05□□□□□ -0.16
ZNF559-208ENST00000589208 MKRN4PQ13434 485 aaPredicted RBP14.01□□□□□ -0.17
ZNF559-208ENST00000589208 CACNB1Q02641 598 aaPredicted RBP13.99□□□□□ -0.17
ZNF559-208ENST00000589208 DSG3P32926 999 aa13.96□□□□□ -0.17
ZNF559-208ENST00000589208 FBLN2P98095 1184 aa13.88□□□□□ -0.19
ZNF559-208ENST00000589208 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
ZNF559-208ENST00000589208 ZBTB12Q9Y330 459 aaPredicted RBP13.75□□□□□ -0.21
ZNF559-208ENST00000589208 OSCARQ8IYS5 282 aa13.64□□□□□ -0.23
ZNF559-208ENST00000589208 PROM2Q8N271 834 aa13.53□□□□□ -0.24
ZNF559-208ENST00000589208 ZNF692Q9BU19 519 aaPredicted RBP13.51□□□□□ -0.25
ZNF559-208ENST00000589208 SPDYE2BA6NHP3 402 aa13.46□□□□□ -0.25
ZNF559-208ENST00000589208 SPDYE6P0CI01 402 aa13.46□□□□□ -0.25
ZNF559-208ENST00000589208 SPDYE2Q495Y8 402 aa13.46□□□□□ -0.25
ZNF559-208ENST00000589208 TRIM41Q8WV44 630 aa13.45□□□□□ -0.26
ZNF559-208ENST00000589208 SSUH2Q9Y2M2 353 aa13.41□□□□□ -0.26
ZNF559-208ENST00000589208 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
ZNF559-208ENST00000589208 PABPN1Q86U42 306 aaKnown RBP eCLIP13.36□□□□□ -0.27
ZNF559-208ENST00000589208 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.28
ZNF559-208ENST00000589208 VASPP50552 380 aaPredicted RBP13.28□□□□□ -0.28
ZNF559-208ENST00000589208 AMER1Q5JTC6 1135 aaPredicted RBP13.23□□□□□ -0.29
ZNF559-208ENST00000589208 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
ZNF559-208ENST00000589208 IFNLR1Q8IU57 520 aaPredicted RBP13.17□□□□□ -0.3
ZNF559-208ENST00000589208 ILDR1Q86SU0 546 aaPredicted RBP13.15□□□□□ -0.3
ZNF559-208ENST00000589208 AKT1S1Q96B36 256 aa13.12□□□□□ -0.31
ZNF559-208ENST00000589208 STAG3Q9UJ98 1225 aa13.1□□□□□ -0.31
ZNF559-208ENST00000589208 REM2Q8IYK8 340 aaPredicted RBP13.06□□□□□ -0.32
ZNF559-208ENST00000589208 MIER1Q8N108 512 aa13.04□□□□□ -0.32
ZNF559-208ENST00000589208 PLCD3Q8N3E9 789 aa13.04□□□□□ -0.32
ZNF559-208ENST00000589208 CLEC11AQ9Y240 323 aa13.04□□□□□ -0.32
ZNF559-208ENST00000589208 KLHL34Q8N239 644 aa13.01□□□□□ -0.33
ZNF559-208ENST00000589208 NISCHQ9Y2I1 1504 aa13□□□□□ -0.33
ZNF559-208ENST00000589208 SPDYE1Q8NFV5 336 aaPredicted RBP13□□□□□ -0.33
ZNF559-208ENST00000589208 PITPNM1O00562 1244 aa12.93□□□□□ -0.34
ZNF559-208ENST00000589208 PRR29P0C7W0 189 aa12.9□□□□□ -0.34
ZNF559-208ENST00000589208 SPOCK2Q92563 424 aa12.89□□□□□ -0.35
ZNF559-208ENST00000589208 PLEKHG5O94827 1062 aa12.84□□□□□ -0.35
ZNF559-208ENST00000589208 PKD2Q13563 968 aa12.83□□□□□ -0.36
ZNF559-208ENST00000589208 CREBZFQ9NS37 354 aa12.83□□□□□ -0.36
ZNF559-208ENST00000589208 CECR2Q9BXF3 1484 aa12.81□□□□□ -0.36
ZNF559-208ENST00000589208 CUX2O14529 1486 aa12.78□□□□□ -0.36
ZNF559-208ENST00000589208 ZBTB47Q9UFB7 747 aaPredicted RBP12.76□□□□□ -0.37
ZNF559-208ENST00000589208 CHADLQ6NUI6 762 aa12.74□□□□□ -0.37
ZNF559-208ENST00000589208 MNX1P50219 401 aaPredicted RBP12.73□□□□□ -0.37
ZNF559-208ENST00000589208 CIZ1Q9ULV3 898 aaPredicted RBP12.71□□□□□ -0.37
ZNF559-208ENST00000589208 ECM2O94769 699 aaPredicted RBP12.68□□□□□ -0.38
ZNF559-208ENST00000589208 DCAF8L2P0C7V8 631 aa12.67□□□□□ -0.38
ZNF559-208ENST00000589208 NUBP1P53384 320 aa12.67□□□□□ -0.38
ZNF559-208ENST00000589208 CHRDL2Q6WN34 429 aa12.61□□□□□ -0.39
ZNF559-208ENST00000589208 CC2D2AQ9P2K1 1620 aa12.61□□□□□ -0.39
ZNF559-208ENST00000589208 PRKAR2AP13861 404 aaKnown RBP12.6□□□□□ -0.39
ZNF559-208ENST00000589208 RGL2O15211 777 aa12.59□□□□□ -0.39
ZNF559-208ENST00000589208 DCAF8Q5TAQ9 597 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms