RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 CECR2Q9BXF3 1484 aa8.96□□□□□ -0.98
AP000547.3-204ENST00000588548 BRPF3Q9ULD4 1205 aa8.94□□□□□ -0.98
AP000547.3-204ENST00000588548 NACADO15069 1562 aa8.94□□□□□ -0.98
AP000547.3-204ENST00000588548 FAM43AQ8N2R8 423 aa8.91□□□□□ -0.98
AP000547.3-204ENST00000588548 USP35Q9P2H5 1018 aa8.91□□□□□ -0.98
AP000547.3-204ENST00000588548 RB1CC1Q8TDY2 1594 aa8.91□□□□□ -0.98
AP000547.3-204ENST00000588548 RRP9O43818 475 aaKnown RBP8.9□□□□□ -0.98
AP000547.3-204ENST00000588548 SLC4A1APQ9BWU0 796 aaKnown RBP8.89□□□□□ -0.99
AP000547.3-204ENST00000588548 MROH2BQ7Z745 1585 aa8.89□□□□□ -0.99
AP000547.3-204ENST00000588548 HSP90AA2PQ14568 343 aaPredicted RBP8.88□□□□□ -0.99
AP000547.3-204ENST00000588548 KCNH8Q96L42 1107 aa8.88□□□□□ -0.99
AP000547.3-204ENST00000588548 IPO9Q96P70 1041 aaKnown RBP8.87□□□□□ -0.99
AP000547.3-204ENST00000588548 FOXD1Q16676 465 aa8.86□□□□□ -0.99
AP000547.3-204ENST00000588548 PABPN1Q86U42 306 aaKnown RBP eCLIP8.86□□□□□ -0.99
AP000547.3-204ENST00000588548 NEFMP07197 916 aa8.85□□□□□ -0.99
AP000547.3-204ENST00000588548 ZBTB47Q9UFB7 747 aaPredicted RBP8.84□□□□□ -0.99
AP000547.3-204ENST00000588548 RSPH4AQ5TD94 716 aa8.83□□□□□ -1
AP000547.3-204ENST00000588548 PRDM4Q9UKN5 801 aa8.83□□□□□ -1
AP000547.3-204ENST00000588548 WIZO95785 1651 aa8.83□□□□□ -1
AP000547.3-204ENST00000588548 ANP32AP39687 249 aaKnown RBP8.81□□□□□ -1
AP000547.3-204ENST00000588548 GSE1Q14687 1217 aa8.8□□□□□ -1
AP000547.3-204ENST00000588548 NAP1L2Q9ULW6 460 aaPredicted RBP8.8□□□□□ -1
AP000547.3-204ENST00000588548 CALD1Q05682 793 aaKnown RBP8.79□□□□□ -1
AP000547.3-204ENST00000588548 PAXIP1Q6ZW49 1069 aaPredicted RBP8.79□□□□□ -1
AP000547.3-204ENST00000588548 PPP4R2Q9NY27 417 aa8.79□□□□□ -1
AP000547.3-204ENST00000588548 HSP90AA1P07900 732 aaKnown RBP8.78□□□□□ -1
AP000547.3-204ENST00000588548 ZNF326Q5BKZ1 582 aaKnown RBP8.78□□□□□ -1
AP000547.3-204ENST00000588548 WRNQ14191 1432 aaPredicted RBP eCLIP8.77□□□□□ -1
AP000547.3-204ENST00000588548 ZBTB22O15209 634 aa8.77□□□□□ -1.01
AP000547.3-204ENST00000588548 CENPJQ9HC77 1338 aaPredicted RBP8.77□□□□□ -1.01
AP000547.3-204ENST00000588548 PPM1GO15355 546 aaPredicted RBP8.76□□□□□ -1.01
AP000547.3-204ENST00000588548 BBXQ8WY36 941 aaPredicted RBP8.75□□□□□ -1.01
AP000547.3-204ENST00000588548 GTF2E1P29083 439 aaPredicted RBP8.75□□□□□ -1.01
AP000547.3-204ENST00000588548 IPO4Q8TEX9 1081 aaKnown RBP8.74□□□□□ -1.01
AP000547.3-204ENST00000588548 NAP1L5Q96NT1 182 aaPredicted RBP8.73□□□□□ -1.01
AP000547.3-204ENST00000588548 BRD2P25440 801 aaKnown RBP8.73□□□□□ -1.01
AP000547.3-204ENST00000588548 RGS3P49796 1198 aa8.73□□□□□ -1.01
AP000547.3-204ENST00000588548 CHMP4BQ9H444 224 aaKnown RBP8.73□□□□□ -1.01
AP000547.3-204ENST00000588548 UNC13AQ9UPW8 1703 aa8.72□□□□□ -1.01
AP000547.3-204ENST00000588548 FRAT1Q92837 279 aaPredicted RBP8.72□□□□□ -1.01
AP000547.3-204ENST00000588548 RRAGDQ9NQL2 400 aaPredicted RBP8.72□□□□□ -1.01
AP000547.3-204ENST00000588548 IRX6P78412 446 aaPredicted RBP8.71□□□□□ -1.02
AP000547.3-204ENST00000588548 TRIM52Q96A61 297 aa8.71□□□□□ -1.02
AP000547.3-204ENST00000588548 LAS1LQ9Y4W2 734 aaKnown RBP8.71□□□□□ -1.02
AP000547.3-204ENST00000588548 BAZ1AQ9NRL2 1556 aaPredicted RBP8.71□□□□□ -1.02
AP000547.3-204ENST00000588548 STAC3Q96MF2 364 aa8.7□□□□□ -1.02
AP000547.3-204ENST00000588548 CCER2I3L3R5 266 aa8.7□□□□□ -1.02
AP000547.3-204ENST00000588548 DCAF11Q8TEB1 546 aa8.69□□□□□ -1.02
AP000547.3-204ENST00000588548 CHMP4AQ9BY43 222 aa8.69□□□□□ -1.02
AP000547.3-204ENST00000588548 DHX37Q8IY37 1157 aaKnown RBP8.69□□□□□ -1.02
AP000547.3-204ENST00000588548 CANXP27824 592 aaKnown RBP8.68□□□□□ -1.02
AP000547.3-204ENST00000588548 PDCL3Q9H2J4 239 aa8.68□□□□□ -1.02
AP000547.3-204ENST00000588548 SMARCA4P51532 1647 aa8.67□□□□□ -1.02
AP000547.3-204ENST00000588548 EEA1Q15075 1411 aa8.67□□□□□ -1.02
AP000547.3-204ENST00000588548 B4GALNT3Q6L9W6 998 aa8.65□□□□□ -1.02
AP000547.3-204ENST00000588548 EIF4G1Q04637 1599 aaKnown RBP8.65□□□□□ -1.02
AP000547.3-204ENST00000588548 BICRAQ9NZM4 1560 aa8.65□□□□□ -1.02
AP000547.3-204ENST00000588548 PNNQ9H307 717 aaKnown RBP8.65□□□□□ -1.02
AP000547.3-204ENST00000588548 CCDC88BA6NC98 1476 aa8.65□□□□□ -1.03
AP000547.3-204ENST00000588548 DNAJC5BQ9UF47 199 aa8.63□□□□□ -1.03
AP000547.3-204ENST00000588548 TOP2AP11388 1531 aaKnown RBP8.63□□□□□ -1.03
AP000547.3-204ENST00000588548 ABCC8Q09428 1581 aa8.63□□□□□ -1.03
AP000547.3-204ENST00000588548 CLCN1P35523 988 aa8.62□□□□□ -1.03
AP000547.3-204ENST00000588548 CNGB1Q14028 1251 aaPredicted RBP8.62□□□□□ -1.03
AP000547.3-204ENST00000588548 NFKBIBQ15653 356 aa8.62□□□□□ -1.03
AP000547.3-204ENST00000588548 HOMEZQ8IX15 550 aa8.62□□□□□ -1.03
AP000547.3-204ENST00000588548 SMARCA2P51531 1590 aa8.61□□□□□ -1.03
AP000547.3-204ENST00000588548 SAMD1Q6SPF0 538 aaPredicted RBP8.61□□□□□ -1.03
AP000547.3-204ENST00000588548 ZFP91Q96JP5 570 aaPredicted RBP8.61□□□□□ -1.03
AP000547.3-204ENST00000588548 CHRM1P11229 460 aaPredicted RBP8.6□□□□□ -1.03
AP000547.3-204ENST00000588548 PPP4R3CPQ6ZMV5 832 aa8.6□□□□□ -1.03
AP000547.3-204ENST00000588548 FTSJ3Q8IY81 847 aaKnown RBP8.6□□□□□ -1.03
AP000547.3-204ENST00000588548 HNRNPUL2Q1KMD3 747 aaKnown RBP8.6□□□□□ -1.03
AP000547.3-204ENST00000588548 NCAPD3P42695 1498 aa8.59□□□□□ -1.03
AP000547.3-204ENST00000588548 TEX2Q8IWB9 1127 aa8.59□□□□□ -1.03
AP000547.3-204ENST00000588548 NCLP19338 710 aaKnown RBP8.59□□□□□ -1.03
AP000547.3-204ENST00000588548 SMAP1Q8IYB5 467 aaPredicted RBP8.58□□□□□ -1.04
AP000547.3-204ENST00000588548 DHX57Q6P158 1386 aaKnown RBP8.58□□□□□ -1.04
AP000547.3-204ENST00000588548 TPM2P07951 284 aa8.57□□□□□ -1.04
AP000547.3-204ENST00000588548 PPP1R15AO75807 674 aaPredicted RBP8.57□□□□□ -1.04
AP000547.3-204ENST00000588548 DDX10Q13206 875 aaKnown RBP8.56□□□□□ -1.04
AP000547.3-204ENST00000588548 TMEM51Q9NW97 253 aa8.56□□□□□ -1.04
AP000547.3-204ENST00000588548 SECISBP2LQ93073 1101 aaKnown RBP8.55□□□□□ -1.04
AP000547.3-204ENST00000588548 ZNF830Q96NB3 372 aaPredicted RBP8.55□□□□□ -1.04
AP000547.3-204ENST00000588548 DDRGK1Q96HY6 314 aa8.55□□□□□ -1.04
AP000547.3-204ENST00000588548 SOGA1O94964 1423 aa8.54□□□□□ -1.04
AP000547.3-204ENST00000588548 ANP32CO43423 234 aa8.54□□□□□ -1.04
AP000547.3-204ENST00000588548 NPM3O75607 178 aaKnown RBP8.53□□□□□ -1.04
AP000547.3-204ENST00000588548 NPM2Q86SE8 214 aaKnown RBP8.53□□□□□ -1.04
AP000547.3-204ENST00000588548 RUSC2Q8N2Y8 1516 aa8.53□□□□□ -1.04
AP000547.3-204ENST00000588548 TULP1O00294 542 aaPredicted RBP8.53□□□□□ -1.04
AP000547.3-204ENST00000588548 HNRNPUQ00839 825 aaKnown RBP eCLIP8.53□□□□□ -1.04
AP000547.3-204ENST00000588548 UTP14CQ5TAP6 766 aaKnown RBP8.53□□□□□ -1.04
AP000547.3-204ENST00000588548 CEP162Q5TB80 1403 aa8.53□□□□□ -1.04
AP000547.3-204ENST00000588548 L1TD1Q5T7N2 865 aaKnown RBP8.52□□□□□ -1.04
AP000547.3-204ENST00000588548 BCCIPQ9P287 314 aaKnown RBP eCLIP8.52□□□□□ -1.04
AP000547.3-204ENST00000588548 ARID4BQ4LE39 1312 aaPredicted RBP8.52□□□□□ -1.05
AP000547.3-204ENST00000588548 ZHX1Q9UKY1 873 aaPredicted RBP8.51□□□□□ -1.05
AP000547.3-204ENST00000588548 MAP7D2Q96T17 732 aa8.51□□□□□ -1.05
AP000547.3-204ENST00000588548 HAP1P54257 671 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms