RNA–Protein interactions for RNA: ENST00000586086.1

DNMT1-206, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 489 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-206ENST00000586086 RNF25Q96BH1 459 aaPredicted RBP13.65□□□□□ -0.22
DNMT1-206ENST00000586086 STK25O00506 426 aa13.62□□□□□ -0.23
DNMT1-206ENST00000586086 NUBP1P53384 320 aa13.59□□□□□ -0.23
DNMT1-206ENST00000586086 NKX1-1Q15270 411 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-206ENST00000586086 GTPBP6O43824 516 aaPredicted RBP13.58□□□□□ -0.24
DNMT1-206ENST00000586086 FAM212AQ96EL1 285 aa13.57□□□□□ -0.24
DNMT1-206ENST00000586086 VGFO15240 615 aaPredicted RBP13.56□□□□□ -0.24
DNMT1-206ENST00000586086 RYDENQ9NUL5 291 aaKnown RBP13.52□□□□□ -0.25
DNMT1-206ENST00000586086 STK24Q9Y6E0 443 aa13.51□□□□□ -0.25
DNMT1-206ENST00000586086 TULP1O00294 542 aaPredicted RBP13.5□□□□□ -0.25
DNMT1-206ENST00000586086 GTF3C3Q9Y5Q9 886 aa13.5□□□□□ -0.25
DNMT1-206ENST00000586086 SPDYE1Q8NFV5 336 aaPredicted RBP13.48□□□□□ -0.25
DNMT1-206ENST00000586086 CLEC11AQ9Y240 323 aa13.47□□□□□ -0.25
DNMT1-206ENST00000586086 BCL11BQ9C0K0 894 aaPredicted RBP13.46□□□□□ -0.25
DNMT1-206ENST00000586086 PRR29P0C7W0 189 aa13.45□□□□□ -0.26
DNMT1-206ENST00000586086 TIMELESSQ9UNS1 1208 aa13.44□□□□□ -0.26
DNMT1-206ENST00000586086 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-206ENST00000586086 CHRM1P11229 460 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-206ENST00000586086 ERICH6Q7L0X2 663 aa13.41□□□□□ -0.26
DNMT1-206ENST00000586086 ZFP91Q96JP5 570 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-206ENST00000586086 P3H3Q8IVL6 736 aa13.39□□□□□ -0.27
DNMT1-206ENST00000586086 WDR70Q9NW82 654 aa13.39□□□□□ -0.27
DNMT1-206ENST00000586086 SGIP1Q9BQI5 828 aa13.37□□□□□ -0.27
DNMT1-206ENST00000586086 CREBZFQ9NS37 354 aa13.37□□□□□ -0.27
DNMT1-206ENST00000586086 PYGBP11216 843 aa13.36□□□□□ -0.27
DNMT1-206ENST00000586086 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
DNMT1-206ENST00000586086 RASEFQ8IZ41 740 aa13.34□□□□□ -0.27
DNMT1-206ENST00000586086 TMEM132AQ24JP5 1023 aa13.33□□□□□ -0.28
DNMT1-206ENST00000586086 CACNB1Q02641 598 aaPredicted RBP13.32□□□□□ -0.28
DNMT1-206ENST00000586086 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
DNMT1-206ENST00000586086 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
DNMT1-206ENST00000586086 MNX1P50219 401 aaPredicted RBP13.27□□□□□ -0.29
DNMT1-206ENST00000586086 LMOD2Q6P5Q4 547 aa13.21□□□□□ -0.29
DNMT1-206ENST00000586086 C14orf37Q86TY3 774 aa13.19□□□□□ -0.3
DNMT1-206ENST00000586086 REM2Q8IYK8 340 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-206ENST00000586086 ZNF467Q7Z7K2 595 aaPredicted RBP13.17□□□□□ -0.3
DNMT1-206ENST00000586086 KCNV2Q8TDN2 545 aa13.17□□□□□ -0.3
DNMT1-206ENST00000586086 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.16□□□□□ -0.3
DNMT1-206ENST00000586086 ARXQ96QS3 562 aa13.14□□□□□ -0.31
DNMT1-206ENST00000586086 CADPS2Q86UW7 1296 aa13.13□□□□□ -0.31
DNMT1-206ENST00000586086 TSPYL2Q9H2G4 693 aaPredicted RBP13.13□□□□□ -0.31
DNMT1-206ENST00000586086 PDAP1Q13442 181 aaKnown RBP13.11□□□□□ -0.31
DNMT1-206ENST00000586086 PCDHB8Q9UN66 801 aa13.04□□□□□ -0.32
DNMT1-206ENST00000586086 PCDHB13Q9Y5F0 798 aa13.04□□□□□ -0.32
DNMT1-206ENST00000586086 PSEN1P49768 467 aa13.01□□□□□ -0.33
DNMT1-206ENST00000586086 ARHGEF1Q92888 912 aaKnown RBP13.01□□□□□ -0.33
DNMT1-206ENST00000586086 PITPNM1O00562 1244 aa13□□□□□ -0.33
DNMT1-206ENST00000586086 NEUROD2Q15784 382 aa12.99□□□□□ -0.33
DNMT1-206ENST00000586086 E2F4Q16254 413 aa12.99□□□□□ -0.33
DNMT1-206ENST00000586086 BRPF1P55201 1214 aaPredicted RBP12.98□□□□□ -0.33
DNMT1-206ENST00000586086 MFRPQ9BY79 579 aa12.98□□□□□ -0.33
DNMT1-206ENST00000586086 ZC3H15Q8WU90 426 aaKnown RBP12.97□□□□□ -0.33
DNMT1-206ENST00000586086 CHADLQ6NUI6 762 aa12.96□□□□□ -0.33
DNMT1-206ENST00000586086 HOMEZQ8IX15 550 aa12.95□□□□□ -0.34
DNMT1-206ENST00000586086 NLRP6P59044 892 aa12.93□□□□□ -0.34
DNMT1-206ENST00000586086 ZNF579Q8NAF0 562 aaKnown RBP12.93□□□□□ -0.34
DNMT1-206ENST00000586086 SLC24A3Q9HC58 644 aa12.92□□□□□ -0.34
DNMT1-206ENST00000586086 SEMA3EO15041 775 aa12.9□□□□□ -0.34
DNMT1-206ENST00000586086 PPP1R37O75864 691 aa12.9□□□□□ -0.34
DNMT1-206ENST00000586086 SMYD5Q6GMV2 418 aa12.9□□□□□ -0.34
DNMT1-206ENST00000586086 FARP1Q9Y4F1 1045 aaPredicted RBP12.9□□□□□ -0.34
DNMT1-206ENST00000586086 TESPA1A2RU30 521 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-206ENST00000586086 EFCAB3Q8N7B9 438 aa12.87□□□□□ -0.35
DNMT1-206ENST00000586086 CABP2Q9NPB3 220 aa12.87□□□□□ -0.35
DNMT1-206ENST00000586086 SOX12O15370 315 aa12.86□□□□□ -0.35
DNMT1-206ENST00000586086 PAK3O75914 559 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-206ENST00000586086 DAXXQ9UER7 740 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-206ENST00000586086 PHF8Q9UPP1 1060 aa12.84□□□□□ -0.35
DNMT1-206ENST00000586086 CCDC61Q9Y6R9 512 aa12.84□□□□□ -0.35
DNMT1-206ENST00000586086 PDE4AP27815 886 aa12.82□□□□□ -0.36
DNMT1-206ENST00000586086 LARP6Q9BRS8 491 aaKnown RBP12.82□□□□□ -0.36
DNMT1-206ENST00000586086 FBXO22Q8NEZ5 403 aa12.8□□□□□ -0.36
DNMT1-206ENST00000586086 SUPT5HO00267 1087 aaKnown RBP12.79□□□□□ -0.36
DNMT1-206ENST00000586086 IFNL1Q8IU54 200 aa12.79□□□□□ -0.36
DNMT1-206ENST00000586086 ZMYND10O75800 440 aa12.75□□□□□ -0.37
DNMT1-206ENST00000586086 PRKAR2AP13861 404 aaKnown RBP12.75□□□□□ -0.37
DNMT1-206ENST00000586086 MAP3K13O43283 966 aa12.73□□□□□ -0.37
DNMT1-206ENST00000586086 KRI1Q8N9T8 703 aaKnown RBP12.72□□□□□ -0.37
DNMT1-206ENST00000586086 NCKAP5LQ9HCH0 1330 aa12.71□□□□□ -0.37
DNMT1-206ENST00000586086 GOLGA2Q08379 1002 aa12.71□□□□□ -0.37
DNMT1-206ENST00000586086 DDX27Q96GQ7 796 aaKnown RBP12.71□□□□□ -0.37
DNMT1-206ENST00000586086 BARGINQ6ZT62 677 aa12.68□□□□□ -0.38
DNMT1-206ENST00000586086 KIF12Q96FN5 646 aa12.68□□□□□ -0.38
DNMT1-206ENST00000586086 AK7Q96M32 723 aa12.66□□□□□ -0.38
DNMT1-206ENST00000586086 MFSD10Q14728 455 aa12.65□□□□□ -0.38
DNMT1-206ENST00000586086 GPIHBP1Q8IV16 184 aa12.64□□□□□ -0.39
DNMT1-206ENST00000586086 CRISPLD2Q9H0B8 497 aa12.62□□□□□ -0.39
DNMT1-206ENST00000586086 ARIH1Q9Y4X5 557 aaPredicted RBP12.62□□□□□ -0.39
DNMT1-206ENST00000586086 IL27Q8NEV9 243 aa12.61□□□□□ -0.39
DNMT1-206ENST00000586086 RBM26Q5T8P6 1007 aaKnown RBP12.6□□□□□ -0.39
DNMT1-206ENST00000586086 GPBP1L1Q9HC44 474 aaPredicted RBP12.59□□□□□ -0.39
DNMT1-206ENST00000586086 MS4A4AQ96JQ5 239 aa12.58□□□□□ -0.4
DNMT1-206ENST00000586086 MKRN3Q13064 507 aaKnown RBP12.57□□□□□ -0.4
DNMT1-206ENST00000586086 ZRANB1Q9UGI0 708 aa12.56□□□□□ -0.4
DNMT1-206ENST00000586086 MLLT3P42568 568 aaPredicted RBP12.55□□□□□ -0.4
DNMT1-206ENST00000586086 CAMK2BQ13554 666 aa12.55□□□□□ -0.4
DNMT1-206ENST00000586086 TMEM106CQ9BVX2 250 aa12.54□□□□□ -0.4
DNMT1-206ENST00000586086 FXR2P51116 673 aaKnown RBP eCLIP12.52□□□□□ -0.413e-6■■□□□ 12
DNMT1-206ENST00000586086 PPP1R15BQ5SWA1 713 aa12.51□□□□□ -0.41
DNMT1-206ENST00000586086 KDM4CQ9H3R0 1056 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms