RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 RUSC2Q8N2Y8 1516 aa8.12□□□□□ -1.11
RTTN-209ENST00000583043 RRBP1Q9P2E9 1410 aaKnown RBP8.11□□□□□ -1.11
RTTN-209ENST00000583043 NEUROD1Q13562 356 aa8.11□□□□□ -1.11
RTTN-209ENST00000583043 P3H3Q8IVL6 736 aa8.11□□□□□ -1.11
RTTN-209ENST00000583043 CUX1P39880 1505 aa8.11□□□□□ -1.11
RTTN-209ENST00000583043 UNC13AQ9UPW8 1703 aa8.11□□□□□ -1.11
RTTN-209ENST00000583043 GTF3C3Q9Y5Q9 886 aa8.11□□□□□ -1.11
RTTN-209ENST00000583043 CARMIL2Q6F5E8 1435 aa8.1□□□□□ -1.11
RTTN-209ENST00000583043 CCDC18Q5T9S5 1454 aa8.1□□□□□ -1.11
RTTN-209ENST00000583043 AQRO60306 1485 aaKnown RBP eCLIP8.1□□□□□ -1.115e-8■■■■■ 34.8
RTTN-209ENST00000583043 DNMBPQ6XZF7 1577 aa8.09□□□□□ -1.11
RTTN-209ENST00000583043 FYCO1Q9BQS8 1478 aa8.09□□□□□ -1.11
RTTN-209ENST00000583043 CASKIN1Q8WXD9 1431 aa8.09□□□□□ -1.11
RTTN-209ENST00000583043 CHMP7Q8WUX9 453 aaPredicted RBP8.09□□□□□ -1.11
RTTN-209ENST00000583043 TSPY4P0CV99 314 aa8.08□□□□□ -1.12
RTTN-209ENST00000583043 TSPY10P0CW01 314 aa8.08□□□□□ -1.12
RTTN-209ENST00000583043 LAMC3Q9Y6N6 1575 aa8.07□□□□□ -1.12
RTTN-209ENST00000583043 ABCA10Q8WWZ4 1543 aa8.07□□□□□ -1.12
RTTN-209ENST00000583043 CCER2I3L3R5 266 aa8.07□□□□□ -1.12
RTTN-209ENST00000583043 PLEKHD1A6NEE1 506 aa8.07□□□□□ -1.12
RTTN-209ENST00000583043 SLC24A1O60721 1099 aa8.06□□□□□ -1.12
RTTN-209ENST00000583043 EIF4G2P78344 907 aaKnown RBP eCLIP8.05□□□□□ -1.12
RTTN-209ENST00000583043 RSPH4AQ5TD94 716 aa8.05□□□□□ -1.12
RTTN-209ENST00000583043 CUL7Q14999 1698 aa8.05□□□□□ -1.12
RTTN-209ENST00000583043 CC2D2AQ9P2K1 1620 aa8.05□□□□□ -1.12
RTTN-209ENST00000583043 GAPVD1Q14C86 1478 aa8.05□□□□□ -1.12
RTTN-209ENST00000583043 DHX57Q6P158 1386 aaKnown RBP8.05□□□□□ -1.12
RTTN-209ENST00000583043 LRRC9Q6ZRR7 1453 aa8.04□□□□□ -1.12
RTTN-209ENST00000583043 RAB3GAP2Q9H2M9 1393 aa8.03□□□□□ -1.12
RTTN-209ENST00000583043 ERCC6Q03468 1493 aa8.03□□□□□ -1.12
RTTN-209ENST00000583043 ARAP1Q96P48 1450 aa8.03□□□□□ -1.12
RTTN-209ENST00000583043 TOPBP1Q92547 1522 aa8.02□□□□□ -1.13
RTTN-209ENST00000583043 KANK4Q5T7N3 995 aaPredicted RBP8.02□□□□□ -1.13
RTTN-209ENST00000583043 FBLN2P98095 1184 aa8.02□□□□□ -1.13
RTTN-209ENST00000583043 ERICH6BQ5W0A0 696 aa8.01□□□□□ -1.13
RTTN-209ENST00000583043 CFDP1Q9UEE9 299 aaPredicted RBP8.01□□□□□ -1.13
RTTN-209ENST00000583043 IFT140Q96RY7 1462 aa8□□□□□ -1.13
RTTN-209ENST00000583043 GRIN2BQ13224 1484 aa8□□□□□ -1.13
RTTN-209ENST00000583043 AEBP2Q6ZN18 517 aaPredicted RBP8□□□□□ -1.13
RTTN-209ENST00000583043 MIER1Q8N108 512 aa8□□□□□ -1.13
RTTN-209ENST00000583043 TIAM1Q13009 1591 aa8□□□□□ -1.13
RTTN-209ENST00000583043 MIA2Q96PC5 1412 aa8□□□□□ -1.13
RTTN-209ENST00000583043 MYOM3Q5VTT5 1437 aa8□□□□□ -1.13
RTTN-209ENST00000583043 THOC2Q8NI27 1593 aaKnown RBP7.99□□□□□ -1.13
RTTN-209ENST00000583043 FHOD3Q2V2M9 1422 aa7.99□□□□□ -1.13
RTTN-209ENST00000583043 EHBP1L1Q8N3D4 1523 aa7.99□□□□□ -1.13
RTTN-209ENST00000583043 TDRD9Q8NDG6 1382 aaKnown RBP7.99□□□□□ -1.13
RTTN-209ENST00000583043 MYT1LQ9UL68 1186 aa7.99□□□□□ -1.13
RTTN-209ENST00000583043 MRC2Q9UBG0 1479 aa7.99□□□□□ -1.13
RTTN-209ENST00000583043 FGD6Q6ZV73 1430 aa7.98□□□□□ -1.13
RTTN-209ENST00000583043 POLA1P09884 1462 aaPredicted RBP7.98□□□□□ -1.13
RTTN-209ENST00000583043 SLC4A1APQ9BWU0 796 aaKnown RBP7.98□□□□□ -1.13
RTTN-209ENST00000583043 ANKRD30AQ9BXX3 1397 aa7.98□□□□□ -1.13
RTTN-209ENST00000583043 CDCA8Q53HL2 280 aa7.97□□□□□ -1.13
RTTN-209ENST00000583043 UACAQ9BZF9 1416 aa7.97□□□□□ -1.13
RTTN-209ENST00000583043 PPP1R15AO75807 674 aaPredicted RBP7.97□□□□□ -1.13
RTTN-209ENST00000583043 DDX10Q13206 875 aaKnown RBP7.96□□□□□ -1.14
RTTN-209ENST00000583043 ZNF777Q9ULD5 760 aaPredicted RBP7.95□□□□□ -1.14
RTTN-209ENST00000583043 ROCK2O75116 1388 aaKnown RBP7.95□□□□□ -1.14
RTTN-209ENST00000583043 SCAF1Q9H7N4 1312 aaKnown RBP7.95□□□□□ -1.14
RTTN-209ENST00000583043 ARID4BQ4LE39 1312 aaPredicted RBP7.94□□□□□ -1.14
RTTN-209ENST00000583043 NPM1P06748 294 aaKnown RBP eCLIP7.94□□□□□ -1.14
RTTN-209ENST00000583043 STAC3Q96MF2 364 aa7.94□□□□□ -1.14
RTTN-209ENST00000583043 HECW1Q76N89 1606 aa7.94□□□□□ -1.14
RTTN-209ENST00000583043 AKNAQ7Z591 1439 aa7.94□□□□□ -1.14
RTTN-209ENST00000583043 WDR97A6NE52 1622 aa7.93□□□□□ -1.14
RTTN-209ENST00000583043 RAD54L2Q9Y4B4 1467 aa7.93□□□□□ -1.14
RTTN-209ENST00000583043 PRDM2Q13029 1718 aa7.93□□□□□ -1.14
RTTN-209ENST00000583043 HFM1A2PYH4 1435 aa7.92□□□□□ -1.14
RTTN-209ENST00000583043 RRP7BPQ9NSQ0 103 aa7.92□□□□□ -1.14
RTTN-209ENST00000583043 CHIC2Q9UKJ5 165 aa7.92□□□□□ -1.14
RTTN-209ENST00000583043 POLR3GLQ9BT43 218 aa7.92□□□□□ -1.14
RTTN-209ENST00000583043 KIAA0586Q9BVV6 1533 aa7.91□□□□□ -1.14
RTTN-209ENST00000583043 NCOA2Q15596 1464 aa7.91□□□□□ -1.14
RTTN-209ENST00000583043 ROCK1Q13464 1354 aa7.9□□□□□ -1.14
RTTN-209ENST00000583043 PHLDB1Q86UU1 1377 aa7.9□□□□□ -1.14
RTTN-209ENST00000583043 DAXXQ9UER7 740 aaPredicted RBP7.9□□□□□ -1.14
RTTN-209ENST00000583043 MPHOSPH9Q99550 1183 aa7.89□□□□□ -1.15
RTTN-209ENST00000583043 HNRNPUQ00839 825 aaKnown RBP eCLIP7.88□□□□□ -1.15
RTTN-209ENST00000583043 SUPT6HQ7KZ85 1726 aaKnown RBP7.88□□□□□ -1.15
RTTN-209ENST00000583043 ZNF326Q5BKZ1 582 aaKnown RBP7.88□□□□□ -1.15
RTTN-209ENST00000583043 KANK1Q14678 1352 aa7.88□□□□□ -1.15
RTTN-209ENST00000583043 MAGI1Q96QZ7 1491 aaPredicted RBP7.87□□□□□ -1.15
RTTN-209ENST00000583043 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.87□□□□□ -1.15
RTTN-209ENST00000583043 MRS2Q9HD23 443 aa7.87□□□□□ -1.15
RTTN-209ENST00000583043 PLEKHH2Q8IVE3 1493 aa7.87□□□□□ -1.15
RTTN-209ENST00000583043 KTN1Q86UP2 1357 aaKnown RBP7.87□□□□□ -1.15
RTTN-209ENST00000583043 TMC1Q8TDI8 760 aa7.86□□□□□ -1.15
RTTN-209ENST00000583043 SIN3AQ96ST3 1273 aa7.86□□□□□ -1.15
RTTN-209ENST00000583043 IQGAP2Q13576 1575 aa7.86□□□□□ -1.15
RTTN-209ENST00000583043 JPH4Q96JJ6 628 aa7.86□□□□□ -1.15
RTTN-209ENST00000583043 EFCAB2Q5VUJ9 269 aa7.85□□□□□ -1.15
RTTN-209ENST00000583043 FKBP8Q14318 412 aa7.85□□□□□ -1.15
RTTN-209ENST00000583043 TROQ12816 1431 aaPredicted RBP7.85□□□□□ -1.15
RTTN-209ENST00000583043 KIF21AQ7Z4S6 1674 aa7.84□□□□□ -1.15
RTTN-209ENST00000583043 RALBP1Q15311 655 aa7.84□□□□□ -1.15
RTTN-209ENST00000583043 ARID3CA6NKF2 412 aa7.84□□□□□ -1.15
RTTN-209ENST00000583043 PTPRGP23470 1445 aa7.83□□□□□ -1.16
RTTN-209ENST00000583043 PCF11O94913 1555 aaKnown RBP7.83□□□□□ -1.16
RTTN-209ENST00000583043 CARD11Q9BXL7 1154 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms