RNA–Protein interactions for RNA: ENST00000581776.5

MSI2-214, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2

Gene MSI2, Length 493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-214ENST00000581776 ERCC6Q03468 1493 aa12.06□□□□□ -0.48
MSI2-214ENST00000581776 MAMSTRQ6ZN01 415 aa12.05□□□□□ -0.48
MSI2-214ENST00000581776 PELP1Q8IZL8 1130 aaKnown RBP12.04□□□□□ -0.48
MSI2-214ENST00000581776 ZRANB1Q9UGI0 708 aa12.04□□□□□ -0.48
MSI2-214ENST00000581776 DCAF1Q9Y4B6 1507 aa12.04□□□□□ -0.48
MSI2-214ENST00000581776 TRIM41Q8WV44 630 aa12.02□□□□□ -0.49
MSI2-214ENST00000581776 ZCCHC6Q5VYS8 1495 aaKnown RBP12□□□□□ -0.49
MSI2-214ENST00000581776 METRNQ9UJH8 293 aa11.96□□□□□ -0.49
MSI2-214ENST00000581776 SSUH2Q9Y2M2 353 aa11.96□□□□□ -0.49
MSI2-214ENST00000581776 ZNF692Q9BU19 519 aaPredicted RBP11.94□□□□□ -0.5
MSI2-214ENST00000581776 SPNS2Q8IVW8 549 aa11.93□□□□□ -0.5
MSI2-214ENST00000581776 SCUBE2Q9NQ36 999 aa11.92□□□□□ -0.5
MSI2-214ENST00000581776 FBLN2P98095 1184 aa11.88□□□□□ -0.51
MSI2-214ENST00000581776 C7P10643 843 aa11.84□□□□□ -0.51
MSI2-214ENST00000581776 KCNA4P22459 653 aa11.84□□□□□ -0.51
MSI2-214ENST00000581776 SLC39A7Q92504 469 aa11.84□□□□□ -0.51
MSI2-214ENST00000581776 THOC2Q8NI27 1593 aaKnown RBP11.76□□□□□ -0.53
MSI2-214ENST00000581776 PHF12Q96QT6 1004 aa11.76□□□□□ -0.53
MSI2-214ENST00000581776 NCAPD3P42695 1498 aa11.76□□□□□ -0.53
MSI2-214ENST00000581776 NESP48681 1621 aa11.75□□□□□ -0.53
MSI2-214ENST00000581776 ASTLQ6HA08 431 aaPredicted RBP11.74□□□□□ -0.53
MSI2-214ENST00000581776 ATMINO43313 823 aaPredicted RBP11.7□□□□□ -0.54
MSI2-214ENST00000581776 SMARCA2P51531 1590 aa11.68□□□□□ -0.54
MSI2-214ENST00000581776 HMGXB3Q12766 1538 aa11.65□□□□□ -0.54
MSI2-214ENST00000581776 ATAD2BQ9ULI0 1458 aa11.65□□□□□ -0.54
MSI2-214ENST00000581776 ST18O60284 1047 aa11.64□□□□□ -0.55
MSI2-214ENST00000581776 MKRN4PQ13434 485 aaPredicted RBP11.63□□□□□ -0.55
MSI2-214ENST00000581776 LAMC3Q9Y6N6 1575 aa11.62□□□□□ -0.55
MSI2-214ENST00000581776 KIF21AQ7Z4S6 1674 aa11.62□□□□□ -0.55
MSI2-214ENST00000581776 BAZ1AQ9NRL2 1556 aaPredicted RBP11.6□□□□□ -0.55
MSI2-214ENST00000581776 PAK3O75914 559 aaPredicted RBP11.59□□□□□ -0.55
MSI2-214ENST00000581776 PDS5BQ9NTI5 1447 aa11.57□□□□□ -0.56
MSI2-214ENST00000581776 POTEFA5A3E0 1075 aa11.55□□□□□ -0.56
MSI2-214ENST00000581776 BAZ1BQ9UIG0 1483 aaKnown RBP11.55□□□□□ -0.56
MSI2-214ENST00000581776 MS4A3Q96HJ5 214 aa11.54□□□□□ -0.56
MSI2-214ENST00000581776 SMARCA4P51532 1647 aa11.53□□□□□ -0.56
MSI2-214ENST00000581776 MRC2Q9UBG0 1479 aa11.5□□□□□ -0.57
MSI2-214ENST00000581776 FOXD4L1Q9NU39 408 aa11.49□□□□□ -0.57
MSI2-214ENST00000581776 ATN1P54259 1190 aaPredicted RBP11.48□□□□□ -0.57
MSI2-214ENST00000581776 WDR62O43379 1518 aa11.48□□□□□ -0.57
MSI2-214ENST00000581776 RIMBP3CA6NJZ7 1639 aa11.46□□□□□ -0.57
MSI2-214ENST00000581776 RIMBP3BA6NNM3 1639 aa11.46□□□□□ -0.57
MSI2-214ENST00000581776 RIMBP3Q9UFD9 1639 aa11.46□□□□□ -0.57
MSI2-214ENST00000581776 CREBZFQ9NS37 354 aa11.46□□□□□ -0.57
MSI2-214ENST00000581776 PEG3Q9GZU2 1588 aa11.41□□□□□ -0.58
MSI2-214ENST00000581776 CADPSQ9ULU8 1353 aa11.39□□□□□ -0.59
MSI2-214ENST00000581776 SLAIN1Q8ND83 568 aa11.38□□□□□ -0.59
MSI2-214ENST00000581776 CEP164Q9UPV0 1460 aa11.37□□□□□ -0.59
MSI2-214ENST00000581776 ARHGEF11O15085 1522 aa11.36□□□□□ -0.59
MSI2-214ENST00000581776 TMEM121BQ9BXQ6 578 aaPredicted RBP11.35□□□□□ -0.59
MSI2-214ENST00000581776 MARVELD3Q96A59 401 aa11.32□□□□□ -0.6
MSI2-214ENST00000581776 COLQQ9Y215 455 aaPredicted RBP11.31□□□□□ -0.6
MSI2-214ENST00000581776 CYB5RLQ6IPT4 315 aa11.3□□□□□ -0.6
MSI2-214ENST00000581776 FANCD2Q9BXW9 1451 aa11.28□□□□□ -0.6
MSI2-214ENST00000581776 SEC24BO95487 1268 aa11.27□□□□□ -0.61
MSI2-214ENST00000581776 KRTAP3-3Q9BYR6 98 aa11.26□□□□□ -0.61
MSI2-214ENST00000581776 KRTAP3-2Q9BYR7 98 aa11.26□□□□□ -0.61
MSI2-214ENST00000581776 MROH2BQ7Z745 1585 aa11.24□□□□□ -0.61
MSI2-214ENST00000581776 BMP2KQ9NSY1 1161 aaPredicted RBP11.24□□□□□ -0.61
MSI2-214ENST00000581776 ATXN8OSP0DMR3 200 aa11.22□□□□□ -0.61
MSI2-214ENST00000581776 URB2Q14146 1524 aaKnown RBP11.19□□□□□ -0.62
MSI2-214ENST00000581776 ARAP1Q96P48 1450 aa11.19□□□□□ -0.62
MSI2-214ENST00000581776 NPM1P06748 294 aaKnown RBP eCLIP11.18□□□□□ -0.62
MSI2-214ENST00000581776 TRPC6Q9Y210 931 aa11.15□□□□□ -0.62
MSI2-214ENST00000581776 CFTRP13569 1480 aa11.14□□□□□ -0.63
MSI2-214ENST00000581776 IFT140Q96RY7 1462 aa11.14□□□□□ -0.63
MSI2-214ENST00000581776 ZNF608Q9ULD9 1512 aaPredicted RBP11.14□□□□□ -0.63
MSI2-214ENST00000581776 CHD1O14646 1710 aa11.12□□□□□ -0.63
MSI2-214ENST00000581776 RSF1Q96T23 1441 aaPredicted RBP11.12□□□□□ -0.63
MSI2-214ENST00000581776 WIZO95785 1651 aa11.11□□□□□ -0.63
MSI2-214ENST00000581776 EIF4G3O43432 1585 aaKnown RBP11.1□□□□□ -0.63
MSI2-214ENST00000581776 SNPHO15079 494 aa11.09□□□□□ -0.63
MSI2-214ENST00000581776 EMP3P54852 163 aa11.09□□□□□ -0.63
MSI2-214ENST00000581776 POTEB3A0JP26 581 aa11.08□□□□□ -0.64
MSI2-214ENST00000581776 POTEBQ6S5H4 581 aa11.08□□□□□ -0.64
MSI2-214ENST00000581776 TIE1P35590 1138 aa11.07□□□□□ -0.64
MSI2-214ENST00000581776 RNF166Q96A37 237 aaPredicted RBP11.07□□□□□ -0.64
MSI2-214ENST00000581776 HS3ST6Q96QI5 342 aa11.07□□□□□ -0.64
MSI2-214ENST00000581776 PRDM2Q13029 1718 aa11.06□□□□□ -0.64
MSI2-214ENST00000581776 MNX1P50219 401 aaPredicted RBP11.05□□□□□ -0.64
MSI2-214ENST00000581776 STAG3Q9UJ98 1225 aa11.03□□□□□ -0.64
MSI2-214ENST00000581776 FAM205CA6NFA0 338 aa11.01□□□□□ -0.65
MSI2-214ENST00000581776 KIF12Q96FN5 646 aa11.01□□□□□ -0.65
MSI2-214ENST00000581776 TTLL13PA6NNM8 815 aa11□□□□□ -0.65
MSI2-214ENST00000581776 IER5LQ5T953 404 aa11□□□□□ -0.65
MSI2-214ENST00000581776 ILDR1Q86SU0 546 aaPredicted RBP11□□□□□ -0.65
MSI2-214ENST00000581776 TOPBP1Q92547 1522 aa10.99□□□□□ -0.65
MSI2-214ENST00000581776 TSPYL2Q9H2G4 693 aaPredicted RBP10.99□□□□□ -0.65
MSI2-214ENST00000581776 CCDC61Q9Y6R9 512 aa10.98□□□□□ -0.65
MSI2-214ENST00000581776 AQRO60306 1485 aaKnown RBP eCLIP10.98□□□□□ -0.657e-9■■■■■ 35.6
MSI2-214ENST00000581776 ABCC8Q09428 1581 aa10.97□□□□□ -0.65
MSI2-214ENST00000581776 TRIM35Q9UPQ4 493 aa10.95□□□□□ -0.66
MSI2-214ENST00000581776 CLASP1Q7Z460 1538 aa10.94□□□□□ -0.66
MSI2-214ENST00000581776 SYNJ1O43426 1573 aa10.94□□□□□ -0.66
MSI2-214ENST00000581776 TOP2AP11388 1531 aaKnown RBP10.94□□□□□ -0.66
MSI2-214ENST00000581776 TARBP1Q13395 1621 aaKnown RBP10.93□□□□□ -0.66
MSI2-214ENST00000581776 DNMBPQ6XZF7 1577 aa10.93□□□□□ -0.66
MSI2-214ENST00000581776 GAPVD1Q14C86 1478 aa10.89□□□□□ -0.67
MSI2-214ENST00000581776 SNAPC4Q5SXM2 1469 aa10.88□□□□□ -0.67
MSI2-214ENST00000581776 MAP3K13O43283 966 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms