RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 DIP2BQ9P265 1576 aa4.6□□□□□ -1.67
SNORD53-201ENST00000579969 WDR97A6NE52 1622 aa4.6□□□□□ -1.67
SNORD53-201ENST00000579969 MAPKBP1O60336 1514 aa4.59□□□□□ -1.67
SNORD53-201ENST00000579969 NUP160Q12769 1436 aa4.59□□□□□ -1.67
SNORD53-201ENST00000579969 GRIN2AQ12879 1464 aa4.59□□□□□ -1.67
SNORD53-201ENST00000579969 COL17A1Q9UMD9 1497 aaPredicted RBP4.59□□□□□ -1.67
SNORD53-201ENST00000579969 TTBK1Q5TCY1 1321 aaPredicted RBP4.56□□□□□ -1.68
SNORD53-201ENST00000579969 SHROOM2Q13796 1616 aa4.56□□□□□ -1.68
SNORD53-201ENST00000579969 FHAD1B1AJZ9 1412 aa4.55□□□□□ -1.68
SNORD53-201ENST00000579969 TOP2BQ02880 1626 aa4.54□□□□□ -1.68
SNORD53-201ENST00000579969 HSPA2P54652 639 aa4.54□□□□□ -1.68
SNORD53-201ENST00000579969 CUX1P39880 1505 aa4.54□□□□□ -1.68
SNORD53-201ENST00000579969 PBRM1Q86U86 1689 aa4.54□□□□□ -1.68
SNORD53-201ENST00000579969 ABCA10Q8WWZ4 1543 aa4.53□□□□□ -1.68
SNORD53-201ENST00000579969 ADCY10Q96PN6 1610 aa4.53□□□□□ -1.68
SNORD53-201ENST00000579969 PLB1Q6P1J6 1458 aa4.52□□□□□ -1.69
SNORD53-201ENST00000579969 PTPRGP23470 1445 aa4.52□□□□□ -1.69
SNORD53-201ENST00000579969 ASXL2Q76L83 1435 aa4.52□□□□□ -1.69
SNORD53-201ENST00000579969 PTPRMP28827 1452 aa4.51□□□□□ -1.69
SNORD53-201ENST00000579969 GLI2P10070 1586 aa4.5□□□□□ -1.69
SNORD53-201ENST00000579969 PLPPR3Q6T4P5 718 aa4.5□□□□□ -1.69
SNORD53-201ENST00000579969 PPRC1Q5VV67 1664 aaKnown RBP4.5□□□□□ -1.69
SNORD53-201ENST00000579969 ABCA5Q8WWZ7 1642 aa4.5□□□□□ -1.69
SNORD53-201ENST00000579969 TEX14Q8IWB6 1497 aa4.49□□□□□ -1.69
SNORD53-201ENST00000579969 ARID4BQ4LE39 1312 aaPredicted RBP4.49□□□□□ -1.69
SNORD53-201ENST00000579969 ADAMTS12P58397 1594 aa4.49□□□□□ -1.69
SNORD53-201ENST00000579969 WRNQ14191 1432 aaPredicted RBP eCLIP4.49□□□□□ -1.69
SNORD53-201ENST00000579969 KCNH8Q96L42 1107 aa4.49□□□□□ -1.69
SNORD53-201ENST00000579969 SPATA31D1Q6ZQQ2 1576 aa4.48□□□□□ -1.69
SNORD53-201ENST00000579969 ABCC2Q92887 1545 aa4.48□□□□□ -1.69
SNORD53-201ENST00000579969 DMRT2Q9Y5R5 561 aa4.48□□□□□ -1.69
SNORD53-201ENST00000579969 PCF11O94913 1555 aaKnown RBP4.48□□□□□ -1.69
SNORD53-201ENST00000579969 EPRSP07814 1512 aaKnown RBP4.47□□□□□ -1.69
SNORD53-201ENST00000579969 TNIKQ9UKE5 1360 aa4.47□□□□□ -1.69
SNORD53-201ENST00000579969 ERICH3Q5RHP9 1530 aa4.46□□□□□ -1.7
SNORD53-201ENST00000579969 KIAA0586Q9BVV6 1533 aa4.46□□□□□ -1.7
SNORD53-201ENST00000579969 CD109Q6YHK3 1445 aa4.46□□□□□ -1.7
SNORD53-201ENST00000579969 RAPGEF3O95398 923 aa4.45□□□□□ -1.7
SNORD53-201ENST00000579969 UACAQ9BZF9 1416 aa4.45□□□□□ -1.7
SNORD53-201ENST00000579969 MAP3K4Q9Y6R4 1608 aa4.44□□□□□ -1.7
SNORD53-201ENST00000579969 CARMIL2Q6F5E8 1435 aa4.44□□□□□ -1.7
SNORD53-201ENST00000579969 ADAMTSL3P82987 1691 aa4.44□□□□□ -1.7
SNORD53-201ENST00000579969 UHRF1BP1LA0JNW5 1464 aa4.43□□□□□ -1.7
SNORD53-201ENST00000579969 KIF21BO75037 1637 aa4.43□□□□□ -1.7
SNORD53-201ENST00000579969 MAGI3Q5TCQ9 1506 aa4.42□□□□□ -1.7
SNORD53-201ENST00000579969 RUSC2Q8N2Y8 1516 aa4.42□□□□□ -1.7
SNORD53-201ENST00000579969 KDM5BQ9UGL1 1544 aa4.42□□□□□ -1.7
SNORD53-201ENST00000579969 UBAP1LF5GYI3 381 aa4.42□□□□□ -1.7
SNORD53-201ENST00000579969 YEATS2Q9ULM3 1422 aa4.42□□□□□ -1.7
SNORD53-201ENST00000579969 CUL7Q14999 1698 aa4.41□□□□□ -1.7
SNORD53-201ENST00000579969 IGF1RP08069 1367 aa4.41□□□□□ -1.7
SNORD53-201ENST00000579969 MLECQ14165 292 aa4.41□□□□□ -1.7
SNORD53-201ENST00000579969 ARAP3Q8WWN8 1544 aa4.41□□□□□ -1.7
SNORD53-201ENST00000579969 PHLDB1Q86UU1 1377 aa4.4□□□□□ -1.7
SNORD53-201ENST00000579969 CEBPAP49715 358 aaPredicted RBP4.4□□□□□ -1.71
SNORD53-201ENST00000579969 PHF23Q9BUL5 403 aaPredicted RBP4.4□□□□□ -1.71
SNORD53-201ENST00000579969 WDR7Q9Y4E6 1490 aa4.4□□□□□ -1.71
SNORD53-201ENST00000579969 MADDQ8WXG6 1647 aa4.39□□□□□ -1.71
SNORD53-201ENST00000579969 BCORL1Q5H9F3 1711 aa4.38□□□□□ -1.71
SNORD53-201ENST00000579969 HSPA1LP34931 641 aa4.38□□□□□ -1.71
SNORD53-201ENST00000579969 PTPRTO14522 1441 aa4.38□□□□□ -1.71
SNORD53-201ENST00000579969 RIMS1Q86UR5 1692 aaKnown RBP4.37□□□□□ -1.71
SNORD53-201ENST00000579969 SCAF1Q9H7N4 1312 aaKnown RBP4.37□□□□□ -1.71
SNORD53-201ENST00000579969 CARMIL1Q5VZK9 1371 aa4.37□□□□□ -1.71
SNORD53-201ENST00000579969 POGZQ7Z3K3 1410 aa4.37□□□□□ -1.71
SNORD53-201ENST00000579969 ZCCHC11Q5TAX3 1644 aaKnown RBP4.36□□□□□ -1.71
SNORD53-201ENST00000579969 CFAP43Q8NDM7 1665 aa4.36□□□□□ -1.71
SNORD53-201ENST00000579969 PIP4K2BP78356 416 aa4.36□□□□□ -1.71
SNORD53-201ENST00000579969 SETD1BQ9UPS6 1966 aaKnown RBP4.36□□□□□ -1.71
SNORD53-201ENST00000579969 IQSEC2Q5JU85 1478 aa4.36□□□□□ -1.71
SNORD53-201ENST00000579969 DISP1Q96F81 1524 aa4.36□□□□□ -1.71
SNORD53-201ENST00000579969 LTBP4Q8N2S1 1624 aa4.35□□□□□ -1.71
SNORD53-201ENST00000579969 STRCQ7RTU9 1775 aa4.35□□□□□ -1.71
SNORD53-201ENST00000579969 ARID3CA6NKF2 412 aa4.35□□□□□ -1.71
SNORD53-201ENST00000579969 FAM9AQ8IZU1 332 aaPredicted RBP4.35□□□□□ -1.71
SNORD53-201ENST00000579969 TOM1O60784 492 aa4.34□□□□□ -1.71
SNORD53-201ENST00000579969 BIVM-ERCC5R4GMW8 1640 aa4.34□□□□□ -1.71
SNORD53-201ENST00000579969 MED1Q15648 1581 aaPredicted RBP4.33□□□□□ -1.72
SNORD53-201ENST00000579969 NEO1Q92859 1461 aa4.33□□□□□ -1.72
SNORD53-201ENST00000579969 UHRF1BP1Q6BDS2 1440 aa4.33□□□□□ -1.72
SNORD53-201ENST00000579969 AKNAQ7Z591 1439 aa4.33□□□□□ -1.72
SNORD53-201ENST00000579969 KIF27Q86VH2 1401 aa4.33□□□□□ -1.72
SNORD53-201ENST00000579969 ZNF335Q9H4Z2 1342 aaPredicted RBP4.33□□□□□ -1.72
SNORD53-201ENST00000579969 NCKAP5LQ9HCH0 1330 aa4.33□□□□□ -1.72
SNORD53-201ENST00000579969 RGS17Q9UGC6 210 aaPredicted RBP4.33□□□□□ -1.72
SNORD53-201ENST00000579969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.32□□□□□ -1.72
SNORD53-201ENST00000579969 HNRNPUL2Q1KMD3 747 aaKnown RBP4.32□□□□□ -1.72
SNORD53-201ENST00000579969 IQGAP2Q13576 1575 aa4.31□□□□□ -1.72
SNORD53-201ENST00000579969 FANCAO15360 1455 aa4.31□□□□□ -1.72
SNORD53-201ENST00000579969 DENND4BO75064 1496 aaPredicted RBP4.31□□□□□ -1.72
SNORD53-201ENST00000579969 SENP3Q9H4L4 574 aaPredicted RBP4.31□□□□□ -1.72
SNORD53-201ENST00000579969 ESF1Q9H501 851 aaKnown RBP4.31□□□□□ -1.72
SNORD53-201ENST00000579969 FHOD3Q2V2M9 1422 aa4.3□□□□□ -1.72
SNORD53-201ENST00000579969 PREX1Q8TCU6 1659 aa4.3□□□□□ -1.72
SNORD53-201ENST00000579969 POTEAQ6S8J7 498 aa4.3□□□□□ -1.72
SNORD53-201ENST00000579969 UGGT2Q9NYU1 1516 aa4.3□□□□□ -1.72
SNORD53-201ENST00000579969 ATP10BO94823 1461 aa4.3□□□□□ -1.72
SNORD53-201ENST00000579969 PLEKHD1A6NEE1 506 aa4.29□□□□□ -1.72
SNORD53-201ENST00000579969 SUPT5HO00267 1087 aaKnown RBP4.29□□□□□ -1.72
SNORD53-201ENST00000579969 PKD2Q13563 968 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms