RNA–Protein interactions for RNA: ENST00000579173.1

BPTF-212, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-212ENST00000579173 FBXO3Q9UK99 471 aa16.4■□□□□ 0.22
BPTF-212ENST00000579173 ZBTB47Q9UFB7 747 aaPredicted RBP16.36■□□□□ 0.21
BPTF-212ENST00000579173 LHX8Q68G74 356 aa16.35■□□□□ 0.21
BPTF-212ENST00000579173 NUBP1P53384 320 aa16.32■□□□□ 0.2
BPTF-212ENST00000579173 KIF12Q96FN5 646 aa16.3■□□□□ 0.2
BPTF-212ENST00000579173 VASPP50552 380 aaPredicted RBP16.28■□□□□ 0.2
BPTF-212ENST00000579173 MAP3K13O43283 966 aa16.26■□□□□ 0.19
BPTF-212ENST00000579173 PELP1Q8IZL8 1130 aaKnown RBP16.24■□□□□ 0.19
BPTF-212ENST00000579173 TRPC6Q9Y210 931 aa16.24■□□□□ 0.19
BPTF-212ENST00000579173 KLHL34Q8N239 644 aa16.23■□□□□ 0.19
BPTF-212ENST00000579173 FAM212AQ96EL1 285 aa16.22■□□□□ 0.19
BPTF-212ENST00000579173 ATMINO43313 823 aaPredicted RBP16.17■□□□□ 0.18
BPTF-212ENST00000579173 DCAF8Q5TAQ9 597 aa16.16■□□□□ 0.18
BPTF-212ENST00000579173 ASTLQ6HA08 431 aaPredicted RBP16.15■□□□□ 0.18
BPTF-212ENST00000579173 PCDHB13Q9Y5F0 798 aa16.14■□□□□ 0.17
BPTF-212ENST00000579173 ATN1P54259 1190 aaPredicted RBP16.12■□□□□ 0.17
BPTF-212ENST00000579173 BMP2KQ9NSY1 1161 aaPredicted RBP16.11■□□□□ 0.17
BPTF-212ENST00000579173 PYGBP11216 843 aa16.09■□□□□ 0.17
BPTF-212ENST00000579173 METRNQ9UJH8 293 aa16.08■□□□□ 0.16
BPTF-212ENST00000579173 POTEB2H3BUK9 544 aa16.07■□□□□ 0.16
BPTF-212ENST00000579173 IFNL1Q8IU54 200 aa16.05■□□□□ 0.16
BPTF-212ENST00000579173 IFNLR1Q8IU57 520 aaPredicted RBP16.03■□□□□ 0.16
BPTF-212ENST00000579173 SLC39A7Q92504 469 aa16.02■□□□□ 0.16
BPTF-212ENST00000579173 TIE1P35590 1138 aa16.01■□□□□ 0.15
BPTF-212ENST00000579173 TTLL13PA6NNM8 815 aa16■□□□□ 0.15
BPTF-212ENST00000579173 C7P10643 843 aa15.97■□□□□ 0.15
BPTF-212ENST00000579173 SGIP1Q9BQI5 828 aa15.97■□□□□ 0.15
BPTF-212ENST00000579173 PCDHB8Q9UN66 801 aa15.94■□□□□ 0.14
BPTF-212ENST00000579173 TRIM35Q9UPQ4 493 aa15.93■□□□□ 0.14
BPTF-212ENST00000579173 OTUD5Q96G74 571 aa15.92■□□□□ 0.14
BPTF-212ENST00000579173 GSE1Q14687 1217 aa15.91■□□□□ 0.14
BPTF-212ENST00000579173 TMEM106CQ9BVX2 250 aa15.91■□□□□ 0.14
BPTF-212ENST00000579173 SPOCK2Q92563 424 aa15.9■□□□□ 0.14
BPTF-212ENST00000579173 CIZ1Q9ULV3 898 aaPredicted RBP15.89■□□□□ 0.13
BPTF-212ENST00000579173 POTEFA5A3E0 1075 aa15.87■□□□□ 0.13
BPTF-212ENST00000579173 POTEJP0CG39 1038 aa15.87■□□□□ 0.13
BPTF-212ENST00000579173 SEC24BO95487 1268 aa15.83■□□□□ 0.12
BPTF-212ENST00000579173 COLQQ9Y215 455 aaPredicted RBP15.83■□□□□ 0.12
BPTF-212ENST00000579173 ZNF467Q7Z7K2 595 aaPredicted RBP15.72■□□□□ 0.11
BPTF-212ENST00000579173 IER5LQ5T953 404 aa15.7■□□□□ 0.1
BPTF-212ENST00000579173 CHRM1P11229 460 aaPredicted RBP15.68■□□□□ 0.1
BPTF-212ENST00000579173 SCUBE2Q9NQ36 999 aa15.68■□□□□ 0.1
BPTF-212ENST00000579173 PLCG2P16885 1265 aa15.66■□□□□ 0.1
BPTF-212ENST00000579173 MAMSTRQ6ZN01 415 aa15.65■□□□□ 0.1
BPTF-212ENST00000579173 PSEN1P49768 467 aa15.64■□□□□ 0.09
BPTF-212ENST00000579173 IRX5P78411 483 aaPredicted RBP15.62■□□□□ 0.09
BPTF-212ENST00000579173 GOLGA2Q08379 1002 aa15.6■□□□□ 0.09
BPTF-212ENST00000579173 PDAP1Q13442 181 aaKnown RBP15.56■□□□□ 0.08
BPTF-212ENST00000579173 MKRN3Q13064 507 aaKnown RBP15.55■□□□□ 0.08
BPTF-212ENST00000579173 OCEL1Q9H607 264 aa15.54■□□□□ 0.08
BPTF-212ENST00000579173 CABP2Q9NPB3 220 aa15.51■□□□□ 0.07
BPTF-212ENST00000579173 FAM163AQ96GL9 167 aaPredicted RBP15.47■□□□□ 0.07
BPTF-212ENST00000579173 SLAIN1Q8ND83 568 aa15.46■□□□□ 0.07
BPTF-212ENST00000579173 TRIM41Q8WV44 630 aa15.46■□□□□ 0.07
BPTF-212ENST00000579173 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.46■□□□□ 0.073e-10■■■■□ 23.2
BPTF-212ENST00000579173 PDCD7Q8N8D1 485 aaKnown RBP15.45■□□□□ 0.06
BPTF-212ENST00000579173 RNF25Q96BH1 459 aaPredicted RBP15.43■□□□□ 0.06
BPTF-212ENST00000579173 POTEMA6NI47 508 aa15.4■□□□□ 0.06
BPTF-212ENST00000579173 POTEGQ6S5H5 508 aa15.38■□□□□ 0.05
BPTF-212ENST00000579173 RIOK3O14730 519 aaKnown RBP15.37■□□□□ 0.05
BPTF-212ENST00000579173 LCE2DQ5TA82 110 aaPredicted RBP15.37■□□□□ 0.05
BPTF-212ENST00000579173 DPY19L2Q6NUT2 758 aa15.36■□□□□ 0.05
BPTF-212ENST00000579173 EFCAB3Q8N7B9 438 aa15.34■□□□□ 0.05
BPTF-212ENST00000579173 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.34■□□□□ 0.05
BPTF-212ENST00000579173 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.33■□□□□ 0.04
BPTF-212ENST00000579173 ZFP91Q96JP5 570 aaPredicted RBP15.33■□□□□ 0.04
BPTF-212ENST00000579173 C3orf67Q6ZVT6 689 aa15.31■□□□□ 0.04
BPTF-212ENST00000579173 ECM2O94769 699 aaPredicted RBP15.29■□□□□ 0.04
BPTF-212ENST00000579173 L3MBTL3Q96JM7 780 aaPredicted RBP15.28■□□□□ 0.04
BPTF-212ENST00000579173 VGFO15240 615 aaPredicted RBP15.26■□□□□ 0.03
BPTF-212ENST00000579173 ILDR1Q86SU0 546 aaPredicted RBP15.24■□□□□ 0.03
BPTF-212ENST00000579173 PLSCR2Q9NRY7 297 aa15.22■□□□□ 0.03
BPTF-212ENST00000579173 G3V3G9 751 aa15.21■□□□□ 0.03
BPTF-212ENST00000579173 PKD2Q13563 968 aa15.21■□□□□ 0.03
BPTF-212ENST00000579173 ST18O60284 1047 aa15.19■□□□□ 0.02
BPTF-212ENST00000579173 BOLA1Q9Y3E2 137 aa15.19■□□□□ 0.02
BPTF-212ENST00000579173 BCL11BQ9C0K0 894 aaPredicted RBP15.17■□□□□ 0.02
BPTF-212ENST00000579173 RGL2O15211 777 aa15.16■□□□□ 0.02
BPTF-212ENST00000579173 PHF8Q9UPP1 1060 aa15.16■□□□□ 0.02
BPTF-212ENST00000579173 STK24Q9Y6E0 443 aa15.16■□□□□ 0.02
BPTF-212ENST00000579173 STK25O00506 426 aa15.12■□□□□ 0.01
BPTF-212ENST00000579173 MS4A4AQ96JQ5 239 aa15.1■□□□□ 0.01
BPTF-212ENST00000579173 SOX12O15370 315 aa15.08■□□□□ 0
BPTF-212ENST00000579173 TAOK2Q9UL54 1235 aa15.07■□□□□ 0
BPTF-212ENST00000579173 SNPHO15079 494 aa15.06■□□□□ 0
BPTF-212ENST00000579173 MARVELD3Q96A59 401 aa15.06■□□□□ 0
BPTF-212ENST00000579173 MICALL2Q8IY33 904 aa15.04■□□□□ -0
BPTF-212ENST00000579173 TMEM121BQ9BXQ6 578 aaPredicted RBP15□□□□□ -0.01
BPTF-212ENST00000579173 NLRP6P59044 892 aa14.98□□□□□ -0.01
BPTF-212ENST00000579173 CDAN1Q8IWY9 1227 aa14.98□□□□□ -0.01
BPTF-212ENST00000579173 MFRPQ9BY79 579 aa14.98□□□□□ -0.01
BPTF-212ENST00000579173 TMEM92Q6UXU6 159 aa14.96□□□□□ -0.01
BPTF-212ENST00000579173 FBXO22Q8NEZ5 403 aa14.96□□□□□ -0.01
BPTF-212ENST00000579173 PCDH10Q9P2E7 1040 aa14.94□□□□□ -0.02
BPTF-212ENST00000579173 HOXB3P14651 431 aaPredicted RBP14.9□□□□□ -0.02
BPTF-212ENST00000579173 EMP3P54852 163 aa14.9□□□□□ -0.02
BPTF-212ENST00000579173 ZNF710Q8N1W2 664 aa14.86□□□□□ -0.03
BPTF-212ENST00000579173 FAM205CA6NFA0 338 aa14.84□□□□□ -0.03
BPTF-212ENST00000579173 DOK7Q18PE1 504 aa14.81□□□□□ -0.04
BPTF-212ENST00000579173 CHGAP10645 457 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms