RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 CHMP4AQ9BY43 222 aa8.2□□□□□ -1.1
BRIP1-202ENST00000577598 SPDYE4A6NLX3 237 aa8.2□□□□□ -1.1
BRIP1-202ENST00000577598 BRPF1P55201 1214 aaPredicted RBP8.2□□□□□ -1.1
BRIP1-202ENST00000577598 ATP1B4Q9UN42 357 aaPredicted RBP8.2□□□□□ -1.1
BRIP1-202ENST00000577598 IL27Q8NEV9 243 aa8.2□□□□□ -1.1
BRIP1-202ENST00000577598 KCTD17Q8N5Z5 321 aa8.19□□□□□ -1.1
BRIP1-202ENST00000577598 LMOD2Q6P5Q4 547 aa8.14□□□□□ -1.11
BRIP1-202ENST00000577598 PLCD3Q8N3E9 789 aa8.14□□□□□ -1.11
BRIP1-202ENST00000577598 GPBP1L1Q9HC44 474 aaPredicted RBP8.14□□□□□ -1.11
BRIP1-202ENST00000577598 SLC24A3Q9HC58 644 aa8.14□□□□□ -1.11
BRIP1-202ENST00000577598 MYCNP04198 464 aaPredicted RBP8.14□□□□□ -1.11
BRIP1-202ENST00000577598 SCAF1Q9H7N4 1312 aaKnown RBP8.14□□□□□ -1.11
BRIP1-202ENST00000577598 NECTIN2Q92692 538 aa8.14□□□□□ -1.11
BRIP1-202ENST00000577598 WDR70Q9NW82 654 aa8.11□□□□□ -1.11
BRIP1-202ENST00000577598 C1orf115Q9H7X2 142 aa8.1□□□□□ -1.11
BRIP1-202ENST00000577598 ZNF526Q8TF50 670 aaPredicted RBP8.07□□□□□ -1.12
BRIP1-202ENST00000577598 RSPH6AQ9H0K4 717 aa8.07□□□□□ -1.12
BRIP1-202ENST00000577598 MTMR7Q9Y216 660 aa8.05□□□□□ -1.12
BRIP1-202ENST00000577598 A0A0U1RQG5 324 aaPredicted RBP8.04□□□□□ -1.12
BRIP1-202ENST00000577598 IRX6P78412 446 aaPredicted RBP8.02□□□□□ -1.13
BRIP1-202ENST00000577598 PPM1GO15355 546 aaPredicted RBP8.02□□□□□ -1.13
BRIP1-202ENST00000577598 PPP1R1BQ9UD71 204 aaPredicted RBP8.01□□□□□ -1.13
BRIP1-202ENST00000577598 ZMYND15Q9H091 742 aa8□□□□□ -1.13
BRIP1-202ENST00000577598 CCDC82Q8N4S0 544 aa8□□□□□ -1.13
BRIP1-202ENST00000577598 MIER1Q8N108 512 aa7.99□□□□□ -1.13
BRIP1-202ENST00000577598 STK25O00506 426 aa7.97□□□□□ -1.13
BRIP1-202ENST00000577598 SPOCK2Q92563 424 aa7.97□□□□□ -1.13
BRIP1-202ENST00000577598 GZF1Q9H116 711 aaPredicted RBP7.96□□□□□ -1.14
BRIP1-202ENST00000577598 FBXW7Q969H0 707 aa7.95□□□□□ -1.14
BRIP1-202ENST00000577598 TMCO4Q5TGY1 634 aa7.94□□□□□ -1.14
BRIP1-202ENST00000577598 CLUAP1Q96AJ1 413 aa7.93□□□□□ -1.14
BRIP1-202ENST00000577598 ZNF777Q9ULD5 760 aaPredicted RBP7.93□□□□□ -1.14
BRIP1-202ENST00000577598 ARID4BQ4LE39 1312 aaPredicted RBP7.92□□□□□ -1.14
BRIP1-202ENST00000577598 MKRN3Q13064 507 aaKnown RBP7.92□□□□□ -1.14
BRIP1-202ENST00000577598 SAMD1Q6SPF0 538 aaPredicted RBP7.92□□□□□ -1.14
BRIP1-202ENST00000577598 KRI1Q8N9T8 703 aaKnown RBP7.91□□□□□ -1.14
BRIP1-202ENST00000577598 SHROOM4Q9ULL8 1493 aa7.9□□□□□ -1.14
BRIP1-202ENST00000577598 HSP90B1P14625 803 aaKnown RBP7.9□□□□□ -1.14
BRIP1-202ENST00000577598 KCNV2Q8TDN2 545 aa7.9□□□□□ -1.14
BRIP1-202ENST00000577598 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.9□□□□□ -1.141e-6■■■□□ 16.2
BRIP1-202ENST00000577598 ATXN8OSP0DMR3 200 aa7.88□□□□□ -1.15
BRIP1-202ENST00000577598 SEMA3EO15041 775 aa7.86□□□□□ -1.15
BRIP1-202ENST00000577598 CARNS1A5YM72 827 aa7.86□□□□□ -1.15
BRIP1-202ENST00000577598 MFAP1P55081 439 aaKnown RBP7.85□□□□□ -1.15
BRIP1-202ENST00000577598 NKX1-1Q15270 411 aaPredicted RBP7.85□□□□□ -1.15
BRIP1-202ENST00000577598 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.85□□□□□ -1.15
BRIP1-202ENST00000577598 ZC3H15Q8WU90 426 aaKnown RBP7.83□□□□□ -1.16
BRIP1-202ENST00000577598 CCDC136Q96JN2 1154 aa7.83□□□□□ -1.16
BRIP1-202ENST00000577598 PDE4CQ08493 712 aa7.83□□□□□ -1.16
BRIP1-202ENST00000577598 CWC22Q9HCG8 908 aaKnown RBP7.83□□□□□ -1.16
BRIP1-202ENST00000577598 RNF216Q9NWF9 866 aaPredicted RBP7.82□□□□□ -1.16
BRIP1-202ENST00000577598 STK24Q9Y6E0 443 aa7.81□□□□□ -1.16
BRIP1-202ENST00000577598 HMGB1P09429 215 aaKnown RBP7.8□□□□□ -1.16
BRIP1-202ENST00000577598 E9PSI1 815 aa7.77□□□□□ -1.17
BRIP1-202ENST00000577598 RFX1P22670 979 aa7.76□□□□□ -1.17
BRIP1-202ENST00000577598 FAM117AQ9C073 453 aa7.76□□□□□ -1.17
BRIP1-202ENST00000577598 ZNF219Q9P2Y4 722 aaPredicted RBP7.76□□□□□ -1.17
BRIP1-202ENST00000577598 MKRN4PQ13434 485 aaPredicted RBP7.75□□□□□ -1.17
BRIP1-202ENST00000577598 HS6ST3Q8IZP7 471 aa7.75□□□□□ -1.17
BRIP1-202ENST00000577598 RNF25Q96BH1 459 aaPredicted RBP7.75□□□□□ -1.17
BRIP1-202ENST00000577598 RETREG2Q8NC44 543 aa7.74□□□□□ -1.17
BRIP1-202ENST00000577598 CCDC97Q96F63 343 aaPredicted RBP7.74□□□□□ -1.17
BRIP1-202ENST00000577598 BRD2P25440 801 aaKnown RBP7.74□□□□□ -1.17
BRIP1-202ENST00000577598 GTPBP6O43824 516 aaPredicted RBP7.73□□□□□ -1.17
BRIP1-202ENST00000577598 P3H3Q8IVL6 736 aa7.73□□□□□ -1.17
BRIP1-202ENST00000577598 BCL11BQ9C0K0 894 aaPredicted RBP7.73□□□□□ -1.17
BRIP1-202ENST00000577598 ZNF316A6NFI3 1004 aaPredicted RBP7.73□□□□□ -1.17
BRIP1-202ENST00000577598 FAM177A1Q8N128 213 aaPredicted RBP7.7□□□□□ -1.18
BRIP1-202ENST00000577598 KDM4CQ9H3R0 1056 aa7.7□□□□□ -1.18
BRIP1-202ENST00000577598 UBE2Q2Q8WVN8 375 aa7.7□□□□□ -1.18
BRIP1-202ENST00000577598 POLA2Q14181 598 aa7.7□□□□□ -1.18
BRIP1-202ENST00000577598 DCAF8Q5TAQ9 597 aa7.69□□□□□ -1.18
BRIP1-202ENST00000577598 FOSBP53539 338 aa7.68□□□□□ -1.18
BRIP1-202ENST00000577598 CADPS2Q86UW7 1296 aa7.68□□□□□ -1.18
BRIP1-202ENST00000577598 KDM4AO75164 1064 aa7.67□□□□□ -1.18
BRIP1-202ENST00000577598 ZNF592Q92610 1267 aa7.67□□□□□ -1.18
BRIP1-202ENST00000577598 SMARCA5O60264 1052 aaPredicted RBP7.66□□□□□ -1.18
BRIP1-202ENST00000577598 KAT6BQ8WYB5 2073 aa7.66□□□□□ -1.18
BRIP1-202ENST00000577598 RBM26Q5T8P6 1007 aaKnown RBP7.65□□□□□ -1.18
BRIP1-202ENST00000577598 ZFP91Q96JP5 570 aaPredicted RBP7.65□□□□□ -1.19
BRIP1-202ENST00000577598 BRPF3Q9ULD4 1205 aa7.65□□□□□ -1.19
BRIP1-202ENST00000577598 TTLL12Q14166 644 aaPredicted RBP7.62□□□□□ -1.19
BRIP1-202ENST00000577598 POM121Q96HA1 1249 aa7.62□□□□□ -1.19
BRIP1-202ENST00000577598 ABCB7O75027 752 aa7.62□□□□□ -1.19
BRIP1-202ENST00000577598 CDCA8Q53HL2 280 aa7.6□□□□□ -1.19
BRIP1-202ENST00000577598 IRF5Q13568 498 aa7.59□□□□□ -1.19
BRIP1-202ENST00000577598 RGS22Q8NE09 1264 aa7.59□□□□□ -1.19
BRIP1-202ENST00000577598 DNAJC5Q9H3Z4 198 aa7.56□□□□□ -1.2
BRIP1-202ENST00000577598 ZNF692Q9BU19 519 aaPredicted RBP7.56□□□□□ -1.2
BRIP1-202ENST00000577598 PUS7Q96PZ0 661 aaKnown RBP7.55□□□□□ -1.2
BRIP1-202ENST00000577598 U3KPZ7 1027 aaPredicted RBP7.55□□□□□ -1.2
BRIP1-202ENST00000577598 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.55□□□□□ -1.2
BRIP1-202ENST00000577598 PSMD1Q99460 953 aa7.55□□□□□ -1.2
BRIP1-202ENST00000577598 NEFLP07196 543 aa7.55□□□□□ -1.2
BRIP1-202ENST00000577598 PYGBP11216 843 aa7.55□□□□□ -1.2
BRIP1-202ENST00000577598 PRDM10Q9NQV6 1147 aa7.54□□□□□ -1.2
BRIP1-202ENST00000577598 PDE4DQ08499 809 aa7.53□□□□□ -1.2
BRIP1-202ENST00000577598 ZEB1P37275 1124 aaPredicted RBP7.53□□□□□ -1.2
BRIP1-202ENST00000577598 TAF7LQ5H9L4 462 aa7.53□□□□□ -1.2
BRIP1-202ENST00000577598 BCL11AQ9H165 835 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 1403.5 ms