RNA–Protein interactions for RNA: ENST00000577473.1

MIR4643-201, Transcript of microRNA 4643, humanhuman

BASIC

Gene MIR4643, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR4643-201ENST00000577473 MAMSTRQ6ZN01 415 aa8.4□□□□□ -1.06
MIR4643-201ENST00000577473 METRNQ9UJH8 293 aa8.4□□□□□ -1.06
MIR4643-201ENST00000577473 PELP1Q8IZL8 1130 aaKnown RBP8.39□□□□□ -1.07
MIR4643-201ENST00000577473 ASTLQ6HA08 431 aaPredicted RBP8.38□□□□□ -1.07
MIR4643-201ENST00000577473 ATMINO43313 823 aaPredicted RBP8.37□□□□□ -1.07
MIR4643-201ENST00000577473 MIER1Q8N108 512 aa8.37□□□□□ -1.07
MIR4643-201ENST00000577473 POTEMA6NI47 508 aa8.36□□□□□ -1.07
MIR4643-201ENST00000577473 SCUBE2Q9NQ36 999 aa8.34□□□□□ -1.07
MIR4643-201ENST00000577473 POTEGQ6S5H5 508 aa8.33□□□□□ -1.08
MIR4643-201ENST00000577473 CCDC61Q9Y6R9 512 aa8.31□□□□□ -1.08
MIR4643-201ENST00000577473 ATN1P54259 1190 aaPredicted RBP8.3□□□□□ -1.08
MIR4643-201ENST00000577473 PLCD3Q8N3E9 789 aa8.29□□□□□ -1.08
MIR4643-201ENST00000577473 KIF12Q96FN5 646 aa8.29□□□□□ -1.08
MIR4643-201ENST00000577473 FAM163AQ96GL9 167 aaPredicted RBP8.29□□□□□ -1.08
MIR4643-201ENST00000577473 PCDH10Q9P2E7 1040 aa8.29□□□□□ -1.08
MIR4643-201ENST00000577473 PROM2Q8N271 834 aa8.28□□□□□ -1.08
MIR4643-201ENST00000577473 SEC24BO95487 1268 aa8.27□□□□□ -1.09
MIR4643-201ENST00000577473 MAP3K13O43283 966 aa8.25□□□□□ -1.09
MIR4643-201ENST00000577473 TIE1P35590 1138 aa8.24□□□□□ -1.09
MIR4643-201ENST00000577473 BMP2KQ9NSY1 1161 aaPredicted RBP8.24□□□□□ -1.09
MIR4643-201ENST00000577473 ZBTB47Q9UFB7 747 aaPredicted RBP8.24□□□□□ -1.09
MIR4643-201ENST00000577473 POTEJP0CG39 1038 aa8.22□□□□□ -1.09
MIR4643-201ENST00000577473 RASEFQ8IZ41 740 aa8.21□□□□□ -1.1
MIR4643-201ENST00000577473 TRPC6Q9Y210 931 aa8.19□□□□□ -1.1
MIR4643-201ENST00000577473 PCDHB13Q9Y5F0 798 aa8.19□□□□□ -1.1
MIR4643-201ENST00000577473 SGIP1Q9BQI5 828 aa8.18□□□□□ -1.1
MIR4643-201ENST00000577473 TTLL13PA6NNM8 815 aa8.17□□□□□ -1.1
MIR4643-201ENST00000577473 TRIM35Q9UPQ4 493 aa8.15□□□□□ -1.1
MIR4643-201ENST00000577473 FAM212AQ96EL1 285 aa8.14□□□□□ -1.11
MIR4643-201ENST00000577473 POTEFA5A3E0 1075 aa8.13□□□□□ -1.11
MIR4643-201ENST00000577473 IER5LQ5T953 404 aa8.13□□□□□ -1.11
MIR4643-201ENST00000577473 COLQQ9Y215 455 aaPredicted RBP8.12□□□□□ -1.11
MIR4643-201ENST00000577473 PLCG2P16885 1265 aa8.1□□□□□ -1.11
MIR4643-201ENST00000577473 SLAIN1Q8ND83 568 aa8.1□□□□□ -1.11
MIR4643-201ENST00000577473 TMEM106CQ9BVX2 250 aa8.1□□□□□ -1.11
MIR4643-201ENST00000577473 DCAF8Q5TAQ9 597 aa8.09□□□□□ -1.11
MIR4643-201ENST00000577473 NUBP1P53384 320 aa8.08□□□□□ -1.12
MIR4643-201ENST00000577473 LCE2DQ5TA82 110 aaPredicted RBP8.07□□□□□ -1.12
MIR4643-201ENST00000577473 IFNL1Q8IU54 200 aa8.07□□□□□ -1.12
MIR4643-201ENST00000577473 CDAN1Q8IWY9 1227 aa8.05□□□□□ -1.12
MIR4643-201ENST00000577473 FKBP8Q14318 412 aa8.04□□□□□ -1.12
MIR4643-201ENST00000577473 OCEL1Q9H607 264 aa8.01□□□□□ -1.13
MIR4643-201ENST00000577473 FBXO3Q9UK99 471 aa8.01□□□□□ -1.13
MIR4643-201ENST00000577473 SNPHO15079 494 aa8□□□□□ -1.13
MIR4643-201ENST00000577473 PYGBP11216 843 aa8□□□□□ -1.13
MIR4643-201ENST00000577473 ST18O60284 1047 aa7.99□□□□□ -1.13
MIR4643-201ENST00000577473 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.99□□□□□ -1.13
MIR4643-201ENST00000577473 GOLGA2Q08379 1002 aa7.98□□□□□ -1.13
MIR4643-201ENST00000577473 KLHL34Q8N239 644 aa7.98□□□□□ -1.13
MIR4643-201ENST00000577473 IRX5P78411 483 aaPredicted RBP7.96□□□□□ -1.14
MIR4643-201ENST00000577473 PCDHB8Q9UN66 801 aa7.95□□□□□ -1.14
MIR4643-201ENST00000577473 MKRN3Q13064 507 aaKnown RBP7.93□□□□□ -1.14
MIR4643-201ENST00000577473 GSE1Q14687 1217 aa7.93□□□□□ -1.14
MIR4643-201ENST00000577473 TMEM121BQ9BXQ6 578 aaPredicted RBP7.93□□□□□ -1.14
MIR4643-201ENST00000577473 ZNF467Q7Z7K2 595 aaPredicted RBP7.91□□□□□ -1.14
MIR4643-201ENST00000577473 L3MBTL3Q96JM7 780 aaPredicted RBP7.91□□□□□ -1.14
MIR4643-201ENST00000577473 C3orf67Q6ZVT6 689 aa7.9□□□□□ -1.14
MIR4643-201ENST00000577473 G3V3G9 751 aa7.86□□□□□ -1.15
MIR4643-201ENST00000577473 MARVELD3Q96A59 401 aa7.86□□□□□ -1.15
MIR4643-201ENST00000577473 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.85□□□□□ -1.15
MIR4643-201ENST00000577473 EMP3P54852 163 aa7.83□□□□□ -1.16
MIR4643-201ENST00000577473 SPNS2Q8IVW8 549 aa7.83□□□□□ -1.16
MIR4643-201ENST00000577473 PSEN1P49768 467 aa7.82□□□□□ -1.16
MIR4643-201ENST00000577473 MMRN1Q13201 1228 aa7.82□□□□□ -1.16
MIR4643-201ENST00000577473 CHRM1P11229 460 aaPredicted RBP7.81□□□□□ -1.16
MIR4643-201ENST00000577473 VASPP50552 380 aaPredicted RBP7.81□□□□□ -1.16
MIR4643-201ENST00000577473 PDCD7Q8N8D1 485 aaKnown RBP7.79□□□□□ -1.16
MIR4643-201ENST00000577473 CIZ1Q9ULV3 898 aaPredicted RBP7.78□□□□□ -1.16
MIR4643-201ENST00000577473 FAM205CA6NFA0 338 aa7.77□□□□□ -1.17
MIR4643-201ENST00000577473 PDAP1Q13442 181 aaKnown RBP7.77□□□□□ -1.17
MIR4643-201ENST00000577473 ZNF710Q8N1W2 664 aa7.74□□□□□ -1.17
MIR4643-201ENST00000577473 HS3ST6Q96QI5 342 aa7.74□□□□□ -1.17
MIR4643-201ENST00000577473 CABP2Q9NPB3 220 aa7.74□□□□□ -1.17
MIR4643-201ENST00000577473 SPOCK2Q92563 424 aa7.73□□□□□ -1.17
MIR4643-201ENST00000577473 BOLA1Q9Y3E2 137 aa7.72□□□□□ -1.17
MIR4643-201ENST00000577473 DPY19L2Q6NUT2 758 aa7.7□□□□□ -1.18
MIR4643-201ENST00000577473 RIMBP2O15034 1052 aa7.68□□□□□ -1.18
MIR4643-201ENST00000577473 DOK7Q18PE1 504 aa7.68□□□□□ -1.18
MIR4643-201ENST00000577473 ERBB3P21860 1342 aa7.67□□□□□ -1.18
MIR4643-201ENST00000577473 POTEB3A0JP26 581 aa7.64□□□□□ -1.19
MIR4643-201ENST00000577473 POTEBQ6S5H4 581 aa7.64□□□□□ -1.19
MIR4643-201ENST00000577473 ILDR1Q86SU0 546 aaPredicted RBP7.64□□□□□ -1.19
MIR4643-201ENST00000577473 KRTAP3-3Q9BYR6 98 aa7.63□□□□□ -1.19
MIR4643-201ENST00000577473 KRTAP3-2Q9BYR7 98 aa7.63□□□□□ -1.19
MIR4643-201ENST00000577473 HOXB1P14653 301 aaPredicted RBP7.62□□□□□ -1.19
MIR4643-201ENST00000577473 IFNLR1Q8IU57 520 aaPredicted RBP7.62□□□□□ -1.19
MIR4643-201ENST00000577473 TRIM41Q8WV44 630 aa7.62□□□□□ -1.19
MIR4643-201ENST00000577473 HOXB3P14651 431 aaPredicted RBP7.6□□□□□ -1.19
MIR4643-201ENST00000577473 EFCAB3Q8N7B9 438 aa7.6□□□□□ -1.19
MIR4643-201ENST00000577473 VARS2Q5ST30 1063 aaKnown RBP7.56□□□□□ -1.2
MIR4643-201ENST00000577473 RNF166Q96A37 237 aaPredicted RBP7.56□□□□□ -1.2
MIR4643-201ENST00000577473 SOX12O15370 315 aa7.55□□□□□ -1.2
MIR4643-201ENST00000577473 ZSWIM6Q9HCJ5 1215 aa7.55□□□□□ -1.2
MIR4643-201ENST00000577473 MICALL2Q8IY33 904 aa7.52□□□□□ -1.21
MIR4643-201ENST00000577473 MYT1LQ9UL68 1186 aa7.52□□□□□ -1.21
MIR4643-201ENST00000577473 ZNF687Q8N1G0 1237 aa7.51□□□□□ -1.21
MIR4643-201ENST00000577473 RIOK3O14730 519 aaKnown RBP7.5□□□□□ -1.21
MIR4643-201ENST00000577473 VGFO15240 615 aaPredicted RBP7.49□□□□□ -1.21
MIR4643-201ENST00000577473 TAOK2Q9UL54 1235 aa7.49□□□□□ -1.21
MIR4643-201ENST00000577473 PTGER2P43116 358 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 1342.3 ms