RNA–Protein interactions for RNA: ENST00000564269.1

AC055855.3-201, humanhuman

TSL 2 BASIC

Gene AC055855.3, Length 578 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.3-201ENST00000564269 SHROOM4Q9ULL8 1493 aa11□□□□□ -0.65
AC055855.3-201ENST00000564269 DCAF1Q9Y4B6 1507 aa10.99□□□□□ -0.65
AC055855.3-201ENST00000564269 PLEKHG5O94827 1062 aa10.99□□□□□ -0.65
AC055855.3-201ENST00000564269 PLCD3Q8N3E9 789 aa10.99□□□□□ -0.65
AC055855.3-201ENST00000564269 CECR2Q9BXF3 1484 aa10.99□□□□□ -0.65
AC055855.3-201ENST00000564269 POTEIP0CG38 1075 aa10.98□□□□□ -0.65
AC055855.3-201ENST00000564269 CLCN6P51797 869 aa10.98□□□□□ -0.65
AC055855.3-201ENST00000564269 CC2D2AQ9P2K1 1620 aa10.96□□□□□ -0.65
AC055855.3-201ENST00000564269 GALR2O43603 387 aaPredicted RBP10.96□□□□□ -0.65
AC055855.3-201ENST00000564269 TSPYL2Q9H2G4 693 aaPredicted RBP10.96□□□□□ -0.65
AC055855.3-201ENST00000564269 EIF4G1Q04637 1599 aaKnown RBP10.91□□□□□ -0.66
AC055855.3-201ENST00000564269 DCBLD2Q96PD2 775 aa10.91□□□□□ -0.66
AC055855.3-201ENST00000564269 SCRIBQ14160 1630 aa10.91□□□□□ -0.66
AC055855.3-201ENST00000564269 RASEFQ8IZ41 740 aa10.9□□□□□ -0.66
AC055855.3-201ENST00000564269 FBXO3Q9UK99 471 aa10.88□□□□□ -0.67
AC055855.3-201ENST00000564269 CCDC61Q9Y6R9 512 aa10.88□□□□□ -0.67
AC055855.3-201ENST00000564269 MS4A3Q96HJ5 214 aa10.86□□□□□ -0.67
AC055855.3-201ENST00000564269 ZBTB47Q9UFB7 747 aaPredicted RBP10.84□□□□□ -0.67
AC055855.3-201ENST00000564269 NUBP1P53384 320 aa10.83□□□□□ -0.68
AC055855.3-201ENST00000564269 LHX8Q68G74 356 aa10.81□□□□□ -0.68
AC055855.3-201ENST00000564269 KIF12Q96FN5 646 aa10.8□□□□□ -0.68
AC055855.3-201ENST00000564269 VASPP50552 380 aaPredicted RBP10.79□□□□□ -0.68
AC055855.3-201ENST00000564269 DNAJC5Q9H3Z4 198 aa10.77□□□□□ -0.69
AC055855.3-201ENST00000564269 MAP3K13O43283 966 aa10.76□□□□□ -0.69
AC055855.3-201ENST00000564269 PELP1Q8IZL8 1130 aaKnown RBP10.75□□□□□ -0.69
AC055855.3-201ENST00000564269 FAM212AQ96EL1 285 aa10.73□□□□□ -0.69
AC055855.3-201ENST00000564269 TRPC6Q9Y210 931 aa10.72□□□□□ -0.69
AC055855.3-201ENST00000564269 ATMINO43313 823 aaPredicted RBP10.71□□□□□ -0.69
AC055855.3-201ENST00000564269 ASTLQ6HA08 431 aaPredicted RBP10.71□□□□□ -0.69
AC055855.3-201ENST00000564269 KLHL34Q8N239 644 aa10.71□□□□□ -0.69
AC055855.3-201ENST00000564269 DCAF8Q5TAQ9 597 aa10.68□□□□□ -0.7
AC055855.3-201ENST00000564269 PCDHB13Q9Y5F0 798 aa10.67□□□□□ -0.7
AC055855.3-201ENST00000564269 ATN1P54259 1190 aaPredicted RBP10.66□□□□□ -0.7
AC055855.3-201ENST00000564269 BMP2KQ9NSY1 1161 aaPredicted RBP10.66□□□□□ -0.7
AC055855.3-201ENST00000564269 POTEB2H3BUK9 544 aa10.63□□□□□ -0.71
AC055855.3-201ENST00000564269 METRNQ9UJH8 293 aa10.63□□□□□ -0.71
AC055855.3-201ENST00000564269 PYGBP11216 843 aa10.62□□□□□ -0.71
AC055855.3-201ENST00000564269 TIE1P35590 1138 aa10.62□□□□□ -0.71
AC055855.3-201ENST00000564269 IFNL1Q8IU54 200 aa10.62□□□□□ -0.71
AC055855.3-201ENST00000564269 IFNLR1Q8IU57 520 aaPredicted RBP10.62□□□□□ -0.71
AC055855.3-201ENST00000564269 SGIP1Q9BQI5 828 aa10.62□□□□□ -0.71
AC055855.3-201ENST00000564269 SLC39A7Q92504 469 aa10.61□□□□□ -0.71
AC055855.3-201ENST00000564269 TTLL13PA6NNM8 815 aa10.59□□□□□ -0.71
AC055855.3-201ENST00000564269 C7P10643 843 aa10.59□□□□□ -0.71
AC055855.3-201ENST00000564269 NCAPD3P42695 1498 aa10.56□□□□□ -0.72
AC055855.3-201ENST00000564269 CUX2O14529 1486 aa10.55□□□□□ -0.72
AC055855.3-201ENST00000564269 GSE1Q14687 1217 aa10.55□□□□□ -0.72
AC055855.3-201ENST00000564269 SPOCK2Q92563 424 aa10.55□□□□□ -0.72
AC055855.3-201ENST00000564269 OTUD5Q96G74 571 aa10.53□□□□□ -0.72
AC055855.3-201ENST00000564269 PCDHB8Q9UN66 801 aa10.53□□□□□ -0.72
AC055855.3-201ENST00000564269 POTEFA5A3E0 1075 aa10.52□□□□□ -0.73
AC055855.3-201ENST00000564269 TMEM106CQ9BVX2 250 aa10.52□□□□□ -0.73
AC055855.3-201ENST00000564269 TRIM35Q9UPQ4 493 aa10.52□□□□□ -0.73
AC055855.3-201ENST00000564269 POTEJP0CG39 1038 aa10.51□□□□□ -0.73
AC055855.3-201ENST00000564269 ERCC6Q03468 1493 aa10.5□□□□□ -0.73
AC055855.3-201ENST00000564269 ATAD2BQ9ULI0 1458 aa10.5□□□□□ -0.73
AC055855.3-201ENST00000564269 CIZ1Q9ULV3 898 aaPredicted RBP10.48□□□□□ -0.73
AC055855.3-201ENST00000564269 COLQQ9Y215 455 aaPredicted RBP10.48□□□□□ -0.73
AC055855.3-201ENST00000564269 CHRM1P11229 460 aaPredicted RBP10.45□□□□□ -0.74
AC055855.3-201ENST00000564269 SEC24BO95487 1268 aa10.44□□□□□ -0.74
AC055855.3-201ENST00000564269 IER5LQ5T953 404 aa10.43□□□□□ -0.74
AC055855.3-201ENST00000564269 ZNF467Q7Z7K2 595 aaPredicted RBP10.43□□□□□ -0.74
AC055855.3-201ENST00000564269 NESP48681 1621 aa10.42□□□□□ -0.74
AC055855.3-201ENST00000564269 HMGXB3Q12766 1538 aa10.42□□□□□ -0.74
AC055855.3-201ENST00000564269 SMARCA2P51531 1590 aa10.41□□□□□ -0.74
AC055855.3-201ENST00000564269 SMARCA4P51532 1647 aa10.39□□□□□ -0.75
AC055855.3-201ENST00000564269 MAMSTRQ6ZN01 415 aa10.38□□□□□ -0.75
AC055855.3-201ENST00000564269 BAZ1BQ9UIG0 1483 aaKnown RBP10.36□□□□□ -0.75
AC055855.3-201ENST00000564269 PSEN1P49768 467 aa10.36□□□□□ -0.75
AC055855.3-201ENST00000564269 PLCG2P16885 1265 aa10.35□□□□□ -0.75
AC055855.3-201ENST00000564269 IRX5P78411 483 aaPredicted RBP10.35□□□□□ -0.75
AC055855.3-201ENST00000564269 SCUBE2Q9NQ36 999 aa10.35□□□□□ -0.75
AC055855.3-201ENST00000564269 BAZ1AQ9NRL2 1556 aaPredicted RBP10.34□□□□□ -0.75
AC055855.3-201ENST00000564269 PEG3Q9GZU2 1588 aa10.32□□□□□ -0.76
AC055855.3-201ENST00000564269 PDAP1Q13442 181 aaKnown RBP10.32□□□□□ -0.76
AC055855.3-201ENST00000564269 OCEL1Q9H607 264 aa10.3□□□□□ -0.76
AC055855.3-201ENST00000564269 THOC2Q8NI27 1593 aaKnown RBP10.3□□□□□ -0.76
AC055855.3-201ENST00000564269 GOLGA2Q08379 1002 aa10.29□□□□□ -0.76
AC055855.3-201ENST00000564269 LAMC3Q9Y6N6 1575 aa10.29□□□□□ -0.76
AC055855.3-201ENST00000564269 PDS5BQ9NTI5 1447 aa10.28□□□□□ -0.76
AC055855.3-201ENST00000564269 TRIM41Q8WV44 630 aa10.28□□□□□ -0.76
AC055855.3-201ENST00000564269 MROH2BQ7Z745 1585 aa10.27□□□□□ -0.76
AC055855.3-201ENST00000564269 MKRN3Q13064 507 aaKnown RBP10.27□□□□□ -0.77
AC055855.3-201ENST00000564269 PDCD7Q8N8D1 485 aaKnown RBP10.24□□□□□ -0.77
AC055855.3-201ENST00000564269 CABP2Q9NPB3 220 aa10.24□□□□□ -0.77
AC055855.3-201ENST00000564269 CADPSQ9ULU8 1353 aa10.24□□□□□ -0.77
AC055855.3-201ENST00000564269 RNF25Q96BH1 459 aaPredicted RBP10.23□□□□□ -0.77
AC055855.3-201ENST00000564269 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.22□□□□□ -0.77
AC055855.3-201ENST00000564269 SLAIN1Q8ND83 568 aa10.2□□□□□ -0.78
AC055855.3-201ENST00000564269 KIF21AQ7Z4S6 1674 aa10.19□□□□□ -0.78
AC055855.3-201ENST00000564269 RIOK3O14730 519 aaKnown RBP10.19□□□□□ -0.78
AC055855.3-201ENST00000564269 FAM163AQ96GL9 167 aaPredicted RBP10.19□□□□□ -0.78
AC055855.3-201ENST00000564269 MRC2Q9UBG0 1479 aa10.18□□□□□ -0.78
AC055855.3-201ENST00000564269 LCE2DQ5TA82 110 aaPredicted RBP10.18□□□□□ -0.78
AC055855.3-201ENST00000564269 POTEMA6NI47 508 aa10.16□□□□□ -0.78
AC055855.3-201ENST00000564269 DPY19L2Q6NUT2 758 aa10.16□□□□□ -0.78
AC055855.3-201ENST00000564269 ILDR1Q86SU0 546 aaPredicted RBP10.16□□□□□ -0.78
AC055855.3-201ENST00000564269 POTEGQ6S5H5 508 aa10.15□□□□□ -0.78
AC055855.3-201ENST00000564269 WDR62O43379 1518 aa10.15□□□□□ -0.78
AC055855.3-201ENST00000564269 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms