RNA–Protein interactions for RNA: ENST00000563557.1

AC009097.3-201, humanhuman

BASIC

Gene AC009097.3, Length 1,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009097.3-201ENST00000563557 LHX8Q68G74 356 aa13.63□□□□□ -0.23
AC009097.3-201ENST00000563557 PLSCR2Q9NRY7 297 aa13.63□□□□□ -0.23
AC009097.3-201ENST00000563557 ZNF579Q8NAF0 562 aaKnown RBP13.59□□□□□ -0.23
AC009097.3-201ENST00000563557 GSE1Q14687 1217 aa13.58□□□□□ -0.24
AC009097.3-201ENST00000563557 CCDC61Q9Y6R9 512 aa13.58□□□□□ -0.24
AC009097.3-201ENST00000563557 PHF12Q96QT6 1004 aa13.55□□□□□ -0.24
AC009097.3-201ENST00000563557 CIZ1Q9ULV3 898 aaPredicted RBP13.55□□□□□ -0.24
AC009097.3-201ENST00000563557 GABBR2O75899 941 aa13.51□□□□□ -0.25
AC009097.3-201ENST00000563557 CLCN6P51797 869 aa13.51□□□□□ -0.25
AC009097.3-201ENST00000563557 KIF12Q96FN5 646 aa13.48□□□□□ -0.25
AC009097.3-201ENST00000563557 PYGBP11216 843 aa13.45□□□□□ -0.26
AC009097.3-201ENST00000563557 MAP3K13O43283 966 aa13.43□□□□□ -0.26
AC009097.3-201ENST00000563557 CHRM1P11229 460 aaPredicted RBP13.42□□□□□ -0.26
AC009097.3-201ENST00000563557 GALR2O43603 387 aaPredicted RBP13.39□□□□□ -0.27
AC009097.3-201ENST00000563557 TRIM41Q8WV44 630 aa13.38□□□□□ -0.27
AC009097.3-201ENST00000563557 MS4A3Q96HJ5 214 aa13.38□□□□□ -0.27
AC009097.3-201ENST00000563557 SGIP1Q9BQI5 828 aa13.38□□□□□ -0.27
AC009097.3-201ENST00000563557 PCDHB13Q9Y5F0 798 aa13.38□□□□□ -0.27
AC009097.3-201ENST00000563557 PKD2Q13563 968 aa13.34□□□□□ -0.27
AC009097.3-201ENST00000563557 IFNL1Q8IU54 200 aa13.32□□□□□ -0.28
AC009097.3-201ENST00000563557 ECM2O94769 699 aaPredicted RBP13.29□□□□□ -0.28
AC009097.3-201ENST00000563557 PCDHB8Q9UN66 801 aa13.29□□□□□ -0.28
AC009097.3-201ENST00000563557 DCBLD2Q96PD2 775 aa13.28□□□□□ -0.28
AC009097.3-201ENST00000563557 ZNF467Q7Z7K2 595 aaPredicted RBP13.27□□□□□ -0.29
AC009097.3-201ENST00000563557 TRPC6Q9Y210 931 aa13.24□□□□□ -0.29
AC009097.3-201ENST00000563557 POTEIP0CG38 1075 aa13.21□□□□□ -0.29
AC009097.3-201ENST00000563557 TIE1P35590 1138 aa13.19□□□□□ -0.3
AC009097.3-201ENST00000563557 RIOK3O14730 519 aaKnown RBP13.18□□□□□ -0.3
AC009097.3-201ENST00000563557 AMER1Q5JTC6 1135 aaPredicted RBP13.17□□□□□ -0.3
AC009097.3-201ENST00000563557 RNF25Q96BH1 459 aaPredicted RBP13.17□□□□□ -0.3
AC009097.3-201ENST00000563557 BMP2KQ9NSY1 1161 aaPredicted RBP13.17□□□□□ -0.3
AC009097.3-201ENST00000563557 RGL2O15211 777 aa13.16□□□□□ -0.3
AC009097.3-201ENST00000563557 ATMINO43313 823 aaPredicted RBP13.16□□□□□ -0.3
AC009097.3-201ENST00000563557 PSEN1P49768 467 aa13.15□□□□□ -0.3
AC009097.3-201ENST00000563557 ASTLQ6HA08 431 aaPredicted RBP13.15□□□□□ -0.3
AC009097.3-201ENST00000563557 TMEM106CQ9BVX2 250 aa13.15□□□□□ -0.3
AC009097.3-201ENST00000563557 PDAP1Q13442 181 aaKnown RBP13.14□□□□□ -0.31
AC009097.3-201ENST00000563557 TTLL13PA6NNM8 815 aa13.13□□□□□ -0.31
AC009097.3-201ENST00000563557 RTN4Q9NQC3 1192 aaKnown RBP13.13□□□□□ -0.31
AC009097.3-201ENST00000563557 ATN1P54259 1190 aaPredicted RBP13.12□□□□□ -0.31
AC009097.3-201ENST00000563557 VGFO15240 615 aaPredicted RBP13.1□□□□□ -0.31
AC009097.3-201ENST00000563557 PELP1Q8IZL8 1130 aaKnown RBP13.1□□□□□ -0.31
AC009097.3-201ENST00000563557 TAOK2Q9UL54 1235 aa13.1□□□□□ -0.31
AC009097.3-201ENST00000563557 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
AC009097.3-201ENST00000563557 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.04□□□□□ -0.32
AC009097.3-201ENST00000563557 ZFP91Q96JP5 570 aaPredicted RBP13.04□□□□□ -0.32
AC009097.3-201ENST00000563557 SLC39A7Q92504 469 aa13.01□□□□□ -0.33
AC009097.3-201ENST00000563557 C7P10643 843 aa13□□□□□ -0.33
AC009097.3-201ENST00000563557 GOLGA2Q08379 1002 aa12.98□□□□□ -0.33
AC009097.3-201ENST00000563557 CABP2Q9NPB3 220 aa12.97□□□□□ -0.33
AC009097.3-201ENST00000563557 STK25O00506 426 aa12.96□□□□□ -0.33
AC009097.3-201ENST00000563557 DCAF8L2P0C7V8 631 aa12.95□□□□□ -0.34
AC009097.3-201ENST00000563557 MKRN3Q13064 507 aaKnown RBP12.95□□□□□ -0.34
AC009097.3-201ENST00000563557 IER5LQ5T953 404 aa12.95□□□□□ -0.34
AC009097.3-201ENST00000563557 BCL11BQ9C0K0 894 aaPredicted RBP12.95□□□□□ -0.34
AC009097.3-201ENST00000563557 METRNQ9UJH8 293 aa12.95□□□□□ -0.34
AC009097.3-201ENST00000563557 STK24Q9Y6E0 443 aa12.94□□□□□ -0.34
AC009097.3-201ENST00000563557 CHGAP10645 457 aaKnown RBP12.91□□□□□ -0.34
AC009097.3-201ENST00000563557 POTEMA6NI47 508 aa12.9□□□□□ -0.34
AC009097.3-201ENST00000563557 SEC24BO95487 1268 aa12.9□□□□□ -0.34
AC009097.3-201ENST00000563557 EFCAB3Q8N7B9 438 aa12.9□□□□□ -0.34
AC009097.3-201ENST00000563557 COLQQ9Y215 455 aaPredicted RBP12.88□□□□□ -0.35
AC009097.3-201ENST00000563557 HS6ST3Q8IZP7 471 aa12.87□□□□□ -0.35
AC009097.3-201ENST00000563557 POTEFA5A3E0 1075 aa12.86□□□□□ -0.35
AC009097.3-201ENST00000563557 IRX5P78411 483 aaPredicted RBP12.86□□□□□ -0.35
AC009097.3-201ENST00000563557 OCEL1Q9H607 264 aa12.86□□□□□ -0.35
AC009097.3-201ENST00000563557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.85□□□□□ -0.35
AC009097.3-201ENST00000563557 SOX12O15370 315 aa12.84□□□□□ -0.35
AC009097.3-201ENST00000563557 PLCG2P16885 1265 aa12.84□□□□□ -0.35
AC009097.3-201ENST00000563557 POTEGQ6S5H5 508 aa12.81□□□□□ -0.36
AC009097.3-201ENST00000563557 POTEB2H3BUK9 544 aa12.79□□□□□ -0.36
AC009097.3-201ENST00000563557 OTUD5Q96G74 571 aa12.79□□□□□ -0.36
AC009097.3-201ENST00000563557 ILDR1Q86SU0 546 aaPredicted RBP12.78□□□□□ -0.36
AC009097.3-201ENST00000563557 PHF8Q9UPP1 1060 aa12.77□□□□□ -0.37
AC009097.3-201ENST00000563557 PDCD7Q8N8D1 485 aaKnown RBP12.76□□□□□ -0.37
AC009097.3-201ENST00000563557 PCDH10Q9P2E7 1040 aa12.76□□□□□ -0.37
AC009097.3-201ENST00000563557 NLRP6P59044 892 aa12.75□□□□□ -0.37
AC009097.3-201ENST00000563557 DNAJC5Q9H3Z4 198 aa12.74□□□□□ -0.37
AC009097.3-201ENST00000563557 DPY19L2Q6NUT2 758 aa12.73□□□□□ -0.37
AC009097.3-201ENST00000563557 MFRPQ9BY79 579 aa12.73□□□□□ -0.37
AC009097.3-201ENST00000563557 POTEJP0CG39 1038 aa12.71□□□□□ -0.37
AC009097.3-201ENST00000563557 FBXO22Q8NEZ5 403 aa12.7□□□□□ -0.38
AC009097.3-201ENST00000563557 NKX1-1Q15270 411 aaPredicted RBP12.69□□□□□ -0.38
AC009097.3-201ENST00000563557 L3MBTL3Q96JM7 780 aaPredicted RBP12.69□□□□□ -0.38
AC009097.3-201ENST00000563557 MS4A4AQ96JQ5 239 aa12.69□□□□□ -0.38
AC009097.3-201ENST00000563557 MAMSTRQ6ZN01 415 aa12.66□□□□□ -0.38
AC009097.3-201ENST00000563557 BBXQ8WY36 941 aaPredicted RBP12.66□□□□□ -0.38
AC009097.3-201ENST00000563557 G3V3G9 751 aa12.62□□□□□ -0.39
AC009097.3-201ENST00000563557 BOLA1Q9Y3E2 137 aa12.62□□□□□ -0.39
AC009097.3-201ENST00000563557 SCUBE2Q9NQ36 999 aa12.61□□□□□ -0.39
AC009097.3-201ENST00000563557 RYDENQ9NUL5 291 aaKnown RBP12.6□□□□□ -0.39
AC009097.3-201ENST00000563557 GTPBP6O43824 516 aaPredicted RBP12.58□□□□□ -0.4
AC009097.3-201ENST00000563557 PPP1R37O75864 691 aa12.57□□□□□ -0.4
AC009097.3-201ENST00000563557 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.57□□□□□ -0.4
AC009097.3-201ENST00000563557 TMEM121BQ9BXQ6 578 aaPredicted RBP12.56□□□□□ -0.4
AC009097.3-201ENST00000563557 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.55□□□□□ -0.4
AC009097.3-201ENST00000563557 C3orf67Q6ZVT6 689 aa12.54□□□□□ -0.4
AC009097.3-201ENST00000563557 MICALL2Q8IY33 904 aa12.54□□□□□ -0.4
AC009097.3-201ENST00000563557 SPRYD3Q8NCJ5 442 aa12.5□□□□□ -0.41
AC009097.3-201ENST00000563557 SLAIN1Q8ND83 568 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms