RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 CCDC61Q9Y6R9 512 aa12.02□□□□□ -0.49
CNOT1-205ENST00000563283 KLHL34Q8N239 644 aa11.99□□□□□ -0.49
CNOT1-205ENST00000563283 FAM212AQ96EL1 285 aa11.97□□□□□ -0.49
CNOT1-205ENST00000563283 PLSCR2Q9NRY7 297 aa11.97□□□□□ -0.49
CNOT1-205ENST00000563283 GALR2O43603 387 aaPredicted RBP11.96□□□□□ -0.49
CNOT1-205ENST00000563283 IFNLR1Q8IU57 520 aaPredicted RBP11.96□□□□□ -0.49
CNOT1-205ENST00000563283 KIF12Q96FN5 646 aa11.92□□□□□ -0.5
CNOT1-205ENST00000563283 MS4A3Q96HJ5 214 aa11.91□□□□□ -0.5
CNOT1-205ENST00000563283 POTEIP0CG38 1075 aa11.89□□□□□ -0.51
CNOT1-205ENST00000563283 LHX8Q68G74 356 aa11.89□□□□□ -0.51
CNOT1-205ENST00000563283 SPOCK2Q92563 424 aa11.88□□□□□ -0.51
CNOT1-205ENST00000563283 DCBLD2Q96PD2 775 aa11.88□□□□□ -0.51
CNOT1-205ENST00000563283 DCAF8Q5TAQ9 597 aa11.87□□□□□ -0.51
CNOT1-205ENST00000563283 MAP3K13O43283 966 aa11.85□□□□□ -0.51
CNOT1-205ENST00000563283 GSE1Q14687 1217 aa11.83□□□□□ -0.52
CNOT1-205ENST00000563283 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
CNOT1-205ENST00000563283 PCDHB13Q9Y5F0 798 aa11.79□□□□□ -0.52
CNOT1-205ENST00000563283 PYGBP11216 843 aa11.76□□□□□ -0.53
CNOT1-205ENST00000563283 ASTLQ6HA08 431 aaPredicted RBP11.76□□□□□ -0.53
CNOT1-205ENST00000563283 TRPC6Q9Y210 931 aa11.75□□□□□ -0.53
CNOT1-205ENST00000563283 ATMINO43313 823 aaPredicted RBP11.74□□□□□ -0.53
CNOT1-205ENST00000563283 IFNL1Q8IU54 200 aa11.74□□□□□ -0.53
CNOT1-205ENST00000563283 TIE1P35590 1138 aa11.73□□□□□ -0.53
CNOT1-205ENST00000563283 CIZ1Q9ULV3 898 aaPredicted RBP11.72□□□□□ -0.53
CNOT1-205ENST00000563283 CHRM1P11229 460 aaPredicted RBP11.71□□□□□ -0.53
CNOT1-205ENST00000563283 BMP2KQ9NSY1 1161 aaPredicted RBP11.71□□□□□ -0.53
CNOT1-205ENST00000563283 PELP1Q8IZL8 1130 aaKnown RBP11.69□□□□□ -0.54
CNOT1-205ENST00000563283 ATN1P54259 1190 aaPredicted RBP11.68□□□□□ -0.54
CNOT1-205ENST00000563283 TTLL13PA6NNM8 815 aa11.66□□□□□ -0.54
CNOT1-205ENST00000563283 ZNF467Q7Z7K2 595 aaPredicted RBP11.64□□□□□ -0.55
CNOT1-205ENST00000563283 TRIM41Q8WV44 630 aa11.64□□□□□ -0.55
CNOT1-205ENST00000563283 PCDHB8Q9UN66 801 aa11.64□□□□□ -0.55
CNOT1-205ENST00000563283 SLC39A7Q92504 469 aa11.63□□□□□ -0.55
CNOT1-205ENST00000563283 C7P10643 843 aa11.6□□□□□ -0.55
CNOT1-205ENST00000563283 TMEM106CQ9BVX2 250 aa11.6□□□□□ -0.55
CNOT1-205ENST00000563283 METRNQ9UJH8 293 aa11.6□□□□□ -0.55
CNOT1-205ENST00000563283 TRIM35Q9UPQ4 493 aa11.57□□□□□ -0.56
CNOT1-205ENST00000563283 IER5LQ5T953 404 aa11.53□□□□□ -0.56
CNOT1-205ENST00000563283 PSEN1P49768 467 aa11.51□□□□□ -0.57
CNOT1-205ENST00000563283 PDAP1Q13442 181 aaKnown RBP11.51□□□□□ -0.57
CNOT1-205ENST00000563283 POTEB2H3BUK9 544 aa11.5□□□□□ -0.57
CNOT1-205ENST00000563283 POTEFA5A3E0 1075 aa11.49□□□□□ -0.57
CNOT1-205ENST00000563283 RNF25Q96BH1 459 aaPredicted RBP11.47□□□□□ -0.57
CNOT1-205ENST00000563283 COLQQ9Y215 455 aaPredicted RBP11.45□□□□□ -0.58
CNOT1-205ENST00000563283 RIOK3O14730 519 aaKnown RBP11.44□□□□□ -0.58
CNOT1-205ENST00000563283 SEC24BO95487 1268 aa11.44□□□□□ -0.58
CNOT1-205ENST00000563283 PKD2Q13563 968 aa11.44□□□□□ -0.58
CNOT1-205ENST00000563283 ECM2O94769 699 aaPredicted RBP11.42□□□□□ -0.58
CNOT1-205ENST00000563283 IRX5P78411 483 aaPredicted RBP11.42□□□□□ -0.58
CNOT1-205ENST00000563283 POTEJP0CG39 1038 aa11.4□□□□□ -0.58
CNOT1-205ENST00000563283 GOLGA2Q08379 1002 aa11.4□□□□□ -0.58
CNOT1-205ENST00000563283 VGFO15240 615 aaPredicted RBP11.39□□□□□ -0.59
CNOT1-205ENST00000563283 PLCG2P16885 1265 aa11.39□□□□□ -0.59
CNOT1-205ENST00000563283 OTUD5Q96G74 571 aa11.39□□□□□ -0.59
CNOT1-205ENST00000563283 MKRN3Q13064 507 aaKnown RBP11.38□□□□□ -0.59
CNOT1-205ENST00000563283 OCEL1Q9H607 264 aa11.37□□□□□ -0.59
CNOT1-205ENST00000563283 MAMSTRQ6ZN01 415 aa11.36□□□□□ -0.59
CNOT1-205ENST00000563283 CABP2Q9NPB3 220 aa11.36□□□□□ -0.59
CNOT1-205ENST00000563283 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.34□□□□□ -0.59
CNOT1-205ENST00000563283 ZFP91Q96JP5 570 aaPredicted RBP11.34□□□□□ -0.59
CNOT1-205ENST00000563283 TAOK2Q9UL54 1235 aa11.34□□□□□ -0.59
CNOT1-205ENST00000563283 RGL2O15211 777 aa11.32□□□□□ -0.6
CNOT1-205ENST00000563283 ILDR1Q86SU0 546 aaPredicted RBP11.31□□□□□ -0.6
CNOT1-205ENST00000563283 PDCD7Q8N8D1 485 aaKnown RBP11.31□□□□□ -0.6
CNOT1-205ENST00000563283 SCUBE2Q9NQ36 999 aa11.31□□□□□ -0.6
CNOT1-205ENST00000563283 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.3□□□□□ -0.62e-13■■■□□ 15.9
CNOT1-205ENST00000563283 EFCAB3Q8N7B9 438 aa11.27□□□□□ -0.61
CNOT1-205ENST00000563283 POTEMA6NI47 508 aa11.26□□□□□ -0.61
CNOT1-205ENST00000563283 PCDH10Q9P2E7 1040 aa11.26□□□□□ -0.61
CNOT1-205ENST00000563283 BCL11BQ9C0K0 894 aaPredicted RBP11.24□□□□□ -0.61
CNOT1-205ENST00000563283 STK25O00506 426 aa11.21□□□□□ -0.61
CNOT1-205ENST00000563283 SOX12O15370 315 aa11.21□□□□□ -0.61
CNOT1-205ENST00000563283 L3MBTL3Q96JM7 780 aaPredicted RBP11.21□□□□□ -0.61
CNOT1-205ENST00000563283 STK24Q9Y6E0 443 aa11.21□□□□□ -0.61
CNOT1-205ENST00000563283 DPY19L2Q6NUT2 758 aa11.18□□□□□ -0.62
CNOT1-205ENST00000563283 POTEGQ6S5H5 508 aa11.18□□□□□ -0.62
CNOT1-205ENST00000563283 PHF8Q9UPP1 1060 aa11.15□□□□□ -0.62
CNOT1-205ENST00000563283 SLAIN1Q8ND83 568 aa11.14□□□□□ -0.63
CNOT1-205ENST00000563283 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.14□□□□□ -0.63
CNOT1-205ENST00000563283 MS4A4AQ96JQ5 239 aa11.13□□□□□ -0.63
CNOT1-205ENST00000563283 C3orf67Q6ZVT6 689 aa11.12□□□□□ -0.63
CNOT1-205ENST00000563283 BOLA1Q9Y3E2 137 aa11.12□□□□□ -0.63
CNOT1-205ENST00000563283 NLRP6P59044 892 aa11.11□□□□□ -0.63
CNOT1-205ENST00000563283 HS6ST3Q8IZP7 471 aa11.11□□□□□ -0.63
CNOT1-205ENST00000563283 G3V3G9 751 aa11.1□□□□□ -0.63
CNOT1-205ENST00000563283 FBXO22Q8NEZ5 403 aa11.1□□□□□ -0.63
CNOT1-205ENST00000563283 MFRPQ9BY79 579 aa11.1□□□□□ -0.63
CNOT1-205ENST00000563283 TMEM121BQ9BXQ6 578 aaPredicted RBP11.09□□□□□ -0.63
CNOT1-205ENST00000563283 CHGAP10645 457 aaKnown RBP11.05□□□□□ -0.64
CNOT1-205ENST00000563283 MICALL2Q8IY33 904 aa11.04□□□□□ -0.64
CNOT1-205ENST00000563283 DNAJC5Q9H3Z4 198 aa11.02□□□□□ -0.65
CNOT1-205ENST00000563283 AMER1Q5JTC6 1135 aaPredicted RBP11.01□□□□□ -0.65
CNOT1-205ENST00000563283 LCE2DQ5TA82 110 aaPredicted RBP11□□□□□ -0.65
CNOT1-205ENST00000563283 CCDC180Q9P1Z9 1646 aa10.99□□□□□ -0.65
CNOT1-205ENST00000563283 FAM163AQ96GL9 167 aaPredicted RBP10.99□□□□□ -0.65
CNOT1-205ENST00000563283 SNPHO15079 494 aa10.97□□□□□ -0.65
CNOT1-205ENST00000563283 DCAF8L2P0C7V8 631 aa10.94□□□□□ -0.66
CNOT1-205ENST00000563283 NKX1-1Q15270 411 aaPredicted RBP10.94□□□□□ -0.66
CNOT1-205ENST00000563283 TMEM92Q6UXU6 159 aa10.93□□□□□ -0.66
CNOT1-205ENST00000563283 RTN4Q9NQC3 1192 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms