RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 MTUS2Q5JR59 1369 aa14.9□□□□□ -0.02
RPAP1-204ENST00000562303 NBR1Q14596 966 aa14.89□□□□□ -0.03
RPAP1-204ENST00000562303 SCRIBQ14160 1630 aa14.87□□□□□ -0.03
RPAP1-204ENST00000562303 NCLP19338 710 aaKnown RBP14.86□□□□□ -0.03
RPAP1-204ENST00000562303 TULP1O00294 542 aaPredicted RBP14.84□□□□□ -0.03
RPAP1-204ENST00000562303 GLIPR1L2Q4G1C9 344 aa14.84□□□□□ -0.03
RPAP1-204ENST00000562303 PPM1GO15355 546 aaPredicted RBP14.82□□□□□ -0.04
RPAP1-204ENST00000562303 RRP7BPQ9NSQ0 103 aa14.81□□□□□ -0.04
RPAP1-204ENST00000562303 CFAP53Q96M91 514 aa14.81□□□□□ -0.04
RPAP1-204ENST00000562303 IRX6P78412 446 aaPredicted RBP14.81□□□□□ -0.04
RPAP1-204ENST00000562303 NPHP1O15259 732 aa14.8□□□□□ -0.04
RPAP1-204ENST00000562303 RGL3Q3MIN7 710 aa14.8□□□□□ -0.04
RPAP1-204ENST00000562303 LMOD2Q6P5Q4 547 aa14.8□□□□□ -0.04
RPAP1-204ENST00000562303 HIRIP3Q9BW71 556 aaPredicted RBP14.8□□□□□ -0.04
RPAP1-204ENST00000562303 EIF4G2P78344 907 aaKnown RBP eCLIP14.79□□□□□ -0.04
RPAP1-204ENST00000562303 PLEKHD1A6NEE1 506 aa14.79□□□□□ -0.04
RPAP1-204ENST00000562303 ZRSR1Q15695 479 aaKnown RBP14.79□□□□□ -0.04
RPAP1-204ENST00000562303 BECN1Q14457 450 aa14.77□□□□□ -0.04
RPAP1-204ENST00000562303 GOLGA6L22H0YM25 854 aa14.75□□□□□ -0.05
RPAP1-204ENST00000562303 CASC1Q6TDU7 716 aa14.74□□□□□ -0.05
RPAP1-204ENST00000562303 TPRNQ4KMQ1 711 aa14.73□□□□□ -0.05
RPAP1-204ENST00000562303 LAS1LQ9Y4W2 734 aaKnown RBP14.73□□□□□ -0.05
RPAP1-204ENST00000562303 KNSTRNQ9Y448 316 aa14.72□□□□□ -0.05
RPAP1-204ENST00000562303 CDCA8Q53HL2 280 aa14.72□□□□□ -0.05
RPAP1-204ENST00000562303 TRIM44Q96DX7 344 aaPredicted RBP14.71□□□□□ -0.05
RPAP1-204ENST00000562303 FTSJ3Q8IY81 847 aaKnown RBP14.71□□□□□ -0.06
RPAP1-204ENST00000562303 DDRGK1Q96HY6 314 aa14.71□□□□□ -0.06
RPAP1-204ENST00000562303 TAOK2Q9UL54 1235 aa14.7□□□□□ -0.06
RPAP1-204ENST00000562303 POGKQ9P215 609 aa14.69□□□□□ -0.06
RPAP1-204ENST00000562303 MAPK8IP3Q9UPT6 1336 aa14.69□□□□□ -0.06
RPAP1-204ENST00000562303 NEUROD2Q15784 382 aa14.68□□□□□ -0.06
RPAP1-204ENST00000562303 PTMAP06454 111 aaKnown RBP14.67□□□□□ -0.06
RPAP1-204ENST00000562303 SENP3-EIF4A1A0A087X0R7 540 aa14.67□□□□□ -0.06
RPAP1-204ENST00000562303 RSF1Q96T23 1441 aaPredicted RBP14.66□□□□□ -0.06
RPAP1-204ENST00000562303 ANP32EQ9BTT0 268 aa14.66□□□□□ -0.06
RPAP1-204ENST00000562303 NUDCQ9Y266 331 aa14.66□□□□□ -0.06
RPAP1-204ENST00000562303 CFDP1Q9UEE9 299 aaPredicted RBP14.65□□□□□ -0.06
RPAP1-204ENST00000562303 OS9Q13438 667 aaPredicted RBP14.64□□□□□ -0.07
RPAP1-204ENST00000562303 GOLGA2Q08379 1002 aa14.63□□□□□ -0.07
RPAP1-204ENST00000562303 CARD11Q9BXL7 1154 aa14.63□□□□□ -0.07
RPAP1-204ENST00000562303 CLIP1P30622 1438 aa14.62□□□□□ -0.07
RPAP1-204ENST00000562303 FGD1P98174 961 aa14.61□□□□□ -0.07
RPAP1-204ENST00000562303 TNNT2P45379 298 aaPredicted RBP14.6□□□□□ -0.07
RPAP1-204ENST00000562303 TRHP20396 242 aaPredicted RBP14.6□□□□□ -0.07
RPAP1-204ENST00000562303 MIER1Q8N108 512 aa14.6□□□□□ -0.07
RPAP1-204ENST00000562303 DNTTIP2Q5QJE6 756 aaKnown RBP14.59□□□□□ -0.07
RPAP1-204ENST00000562303 NAP1L2Q9ULW6 460 aaPredicted RBP14.59□□□□□ -0.07
RPAP1-204ENST00000562303 U2SURPO15042 1029 aaKnown RBP14.57□□□□□ -0.08
RPAP1-204ENST00000562303 KCNJ4P48050 445 aa14.57□□□□□ -0.08
RPAP1-204ENST00000562303 FRAT1Q92837 279 aaPredicted RBP14.57□□□□□ -0.08
RPAP1-204ENST00000562303 ZCCHC6Q5VYS8 1495 aaKnown RBP14.55□□□□□ -0.08
RPAP1-204ENST00000562303 PLCB2Q00722 1185 aa14.55□□□□□ -0.08
RPAP1-204ENST00000562303 CHMP4BQ9H444 224 aaKnown RBP14.54□□□□□ -0.08
RPAP1-204ENST00000562303 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
RPAP1-204ENST00000562303 CLSTN1O94985 981 aa14.54□□□□□ -0.08
RPAP1-204ENST00000562303 MLECQ14165 292 aa14.54□□□□□ -0.08
RPAP1-204ENST00000562303 SOX12O15370 315 aa14.53□□□□□ -0.08
RPAP1-204ENST00000562303 GOLGA6L6A8MZA4 724 aa14.52□□□□□ -0.09
RPAP1-204ENST00000562303 PNNQ9H307 717 aaKnown RBP14.52□□□□□ -0.09
RPAP1-204ENST00000562303 DCAF1Q9Y4B6 1507 aa14.52□□□□□ -0.09
RPAP1-204ENST00000562303 ISY1Q9ULR0 285 aaKnown RBP14.51□□□□□ -0.09
RPAP1-204ENST00000562303 RGS3P49796 1198 aa14.51□□□□□ -0.09
RPAP1-204ENST00000562303 CC2D1BQ5T0F9 858 aaKnown RBP14.51□□□□□ -0.09
RPAP1-204ENST00000562303 HDGFP51858 240 aaKnown RBP14.5□□□□□ -0.09
RPAP1-204ENST00000562303 MS4A1P11836 297 aa14.49□□□□□ -0.09
RPAP1-204ENST00000562303 HSP90AB1P08238 724 aaKnown RBP14.49□□□□□ -0.09
RPAP1-204ENST00000562303 ERCC6Q03468 1493 aa14.47□□□□□ -0.09
RPAP1-204ENST00000562303 SUPT16HQ9Y5B9 1047 aaKnown RBP14.46□□□□□ -0.09
RPAP1-204ENST00000562303 SRPK2P78362 688 aaKnown RBP14.46□□□□□ -0.09
RPAP1-204ENST00000562303 GOLGA6L4A6NEF3 574 aa14.45□□□□□ -0.1
RPAP1-204ENST00000562303 NRDCO43847 1150 aa14.45□□□□□ -0.1
RPAP1-204ENST00000562303 KANK1Q14678 1352 aa14.44□□□□□ -0.1
RPAP1-204ENST00000562303 GOLGA3Q08378 1498 aa14.43□□□□□ -0.1
RPAP1-204ENST00000562303 SAFB2Q14151 953 aaKnown RBP eCLIP14.43□□□□□ -0.1
RPAP1-204ENST00000562303 TMF1P82094 1093 aa14.42□□□□□ -0.1
RPAP1-204ENST00000562303 RTF1Q92541 710 aaKnown RBP14.42□□□□□ -0.1
RPAP1-204ENST00000562303 DCAF11Q8TEB1 546 aa14.39□□□□□ -0.11
RPAP1-204ENST00000562303 MCCP23508 829 aa14.39□□□□□ -0.11
RPAP1-204ENST00000562303 MORC1Q86VD1 984 aa14.39□□□□□ -0.11
RPAP1-204ENST00000562303 CCNB3Q8WWL7 1395 aa14.39□□□□□ -0.11
RPAP1-204ENST00000562303 CSB-PGBD3P0DP91 1061 aa14.38□□□□□ -0.11
RPAP1-204ENST00000562303 ZNF330Q9Y3S2 320 aaPredicted RBP14.38□□□□□ -0.11
RPAP1-204ENST00000562303 GNL2Q13823 731 aaKnown RBP14.38□□□□□ -0.11
RPAP1-204ENST00000562303 KIF27Q86VH2 1401 aa14.37□□□□□ -0.11
RPAP1-204ENST00000562303 PAK3O75914 559 aaPredicted RBP14.37□□□□□ -0.11
RPAP1-204ENST00000562303 NAP1L5Q96NT1 182 aaPredicted RBP14.37□□□□□ -0.11
RPAP1-204ENST00000562303 CEP162Q5TB80 1403 aa14.37□□□□□ -0.11
RPAP1-204ENST00000562303 ERICH6BQ5W0A0 696 aa14.37□□□□□ -0.11
RPAP1-204ENST00000562303 STK26Q9P289 416 aa14.36□□□□□ -0.11
RPAP1-204ENST00000562303 TMX4Q9H1E5 349 aaPredicted RBP14.36□□□□□ -0.11
RPAP1-204ENST00000562303 HSCBQ8IWL3 235 aa14.36□□□□□ -0.11
RPAP1-204ENST00000562303 SIN3AQ96ST3 1273 aa14.36□□□□□ -0.11
RPAP1-204ENST00000562303 EEA1Q15075 1411 aa14.35□□□□□ -0.11
RPAP1-204ENST00000562303 GGT6Q6P531 493 aa14.35□□□□□ -0.11
RPAP1-204ENST00000562303 PPP4R2Q9NY27 417 aa14.35□□□□□ -0.11
RPAP1-204ENST00000562303 CCDC9Q9Y3X0 531 aaKnown RBP14.34□□□□□ -0.11
RPAP1-204ENST00000562303 HDGFL2Q7Z4V5 671 aaPredicted RBP14.33□□□□□ -0.11
RPAP1-204ENST00000562303 APBB1O00213 710 aa14.33□□□□□ -0.12
RPAP1-204ENST00000562303 WRNQ14191 1432 aaPredicted RBP eCLIP14.32□□□□□ -0.12
RPAP1-204ENST00000562303 DRC7Q8IY82 874 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms