RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 POTEIP0CG38 1075 aa14.73□□□□□ -0.05
ZEB1-216ENST00000559496 CCDC61Q9Y6R9 512 aa14.73□□□□□ -0.05
ZEB1-216ENST00000559496 NUBP1P53384 320 aa14.71□□□□□ -0.06
ZEB1-216ENST00000559496 DCBLD2Q96PD2 775 aa14.63□□□□□ -0.07
ZEB1-216ENST00000559496 MS4A3Q96HJ5 214 aa14.62□□□□□ -0.07
ZEB1-216ENST00000559496 KIF12Q96FN5 646 aa14.61□□□□□ -0.07
ZEB1-216ENST00000559496 KLHL34Q8N239 644 aa14.6□□□□□ -0.07
ZEB1-216ENST00000559496 FAM212AQ96EL1 285 aa14.55□□□□□ -0.08
ZEB1-216ENST00000559496 MAP3K13O43283 966 aa14.52□□□□□ -0.08
ZEB1-216ENST00000559496 IFNLR1Q8IU57 520 aaPredicted RBP14.51□□□□□ -0.09
ZEB1-216ENST00000559496 ASTLQ6HA08 431 aaPredicted RBP14.47□□□□□ -0.09
ZEB1-216ENST00000559496 DCAF8Q5TAQ9 597 aa14.47□□□□□ -0.09
ZEB1-216ENST00000559496 SGIP1Q9BQI5 828 aa14.47□□□□□ -0.09
ZEB1-216ENST00000559496 ATMINO43313 823 aaPredicted RBP14.44□□□□□ -0.1
ZEB1-216ENST00000559496 LHX8Q68G74 356 aa14.44□□□□□ -0.1
ZEB1-216ENST00000559496 SPOCK2Q92563 424 aa14.43□□□□□ -0.1
ZEB1-216ENST00000559496 PELP1Q8IZL8 1130 aaKnown RBP14.42□□□□□ -0.1
ZEB1-216ENST00000559496 TRPC6Q9Y210 931 aa14.42□□□□□ -0.1
ZEB1-216ENST00000559496 PCDHB13Q9Y5F0 798 aa14.4□□□□□ -0.1
ZEB1-216ENST00000559496 GSE1Q14687 1217 aa14.39□□□□□ -0.11
ZEB1-216ENST00000559496 TIE1P35590 1138 aa14.38□□□□□ -0.11
ZEB1-216ENST00000559496 BMP2KQ9NSY1 1161 aaPredicted RBP14.38□□□□□ -0.11
ZEB1-216ENST00000559496 IFNL1Q8IU54 200 aa14.35□□□□□ -0.11
ZEB1-216ENST00000559496 ATN1P54259 1190 aaPredicted RBP14.34□□□□□ -0.11
ZEB1-216ENST00000559496 PYGBP11216 843 aa14.34□□□□□ -0.11
ZEB1-216ENST00000559496 SLC39A7Q92504 469 aa14.31□□□□□ -0.12
ZEB1-216ENST00000559496 TTLL13PA6NNM8 815 aa14.3□□□□□ -0.12
ZEB1-216ENST00000559496 C7P10643 843 aa14.28□□□□□ -0.12
ZEB1-216ENST00000559496 METRNQ9UJH8 293 aa14.28□□□□□ -0.12
ZEB1-216ENST00000559496 CHRM1P11229 460 aaPredicted RBP14.26□□□□□ -0.13
ZEB1-216ENST00000559496 POTEB2H3BUK9 544 aa14.25□□□□□ -0.13
ZEB1-216ENST00000559496 CIZ1Q9ULV3 898 aaPredicted RBP14.25□□□□□ -0.13
ZEB1-216ENST00000559496 PCDHB8Q9UN66 801 aa14.2□□□□□ -0.14
ZEB1-216ENST00000559496 TMEM106CQ9BVX2 250 aa14.19□□□□□ -0.14
ZEB1-216ENST00000559496 TRIM35Q9UPQ4 493 aa14.19□□□□□ -0.14
ZEB1-216ENST00000559496 POTEFA5A3E0 1075 aa14.17□□□□□ -0.14
ZEB1-216ENST00000559496 ZNF467Q7Z7K2 595 aaPredicted RBP14.17□□□□□ -0.14
ZEB1-216ENST00000559496 IER5LQ5T953 404 aa14.14□□□□□ -0.15
ZEB1-216ENST00000559496 TRIM41Q8WV44 630 aa14.12□□□□□ -0.15
ZEB1-216ENST00000559496 OTUD5Q96G74 571 aa14.12□□□□□ -0.15
ZEB1-216ENST00000559496 POTEJP0CG39 1038 aa14.1□□□□□ -0.15
ZEB1-216ENST00000559496 COLQQ9Y215 455 aaPredicted RBP14.09□□□□□ -0.15
ZEB1-216ENST00000559496 SEC24BO95487 1268 aa14.03□□□□□ -0.16
ZEB1-216ENST00000559496 PSEN1P49768 467 aa14.02□□□□□ -0.17
ZEB1-216ENST00000559496 IRX5P78411 483 aaPredicted RBP14.02□□□□□ -0.17
ZEB1-216ENST00000559496 PDAP1Q13442 181 aaKnown RBP14□□□□□ -0.17
ZEB1-216ENST00000559496 MAMSTRQ6ZN01 415 aa13.99□□□□□ -0.17
ZEB1-216ENST00000559496 PLCG2P16885 1265 aa13.95□□□□□ -0.18
ZEB1-216ENST00000559496 OCEL1Q9H607 264 aa13.93□□□□□ -0.18
ZEB1-216ENST00000559496 RNF25Q96BH1 459 aaPredicted RBP13.92□□□□□ -0.18
ZEB1-216ENST00000559496 SCUBE2Q9NQ36 999 aa13.92□□□□□ -0.18
ZEB1-216ENST00000559496 RIOK3O14730 519 aaKnown RBP13.88□□□□□ -0.19
ZEB1-216ENST00000559496 GOLGA2Q08379 1002 aa13.88□□□□□ -0.19
ZEB1-216ENST00000559496 ECM2O94769 699 aaPredicted RBP13.87□□□□□ -0.19
ZEB1-216ENST00000559496 MKRN3Q13064 507 aaKnown RBP13.87□□□□□ -0.19
ZEB1-216ENST00000559496 PKD2Q13563 968 aa13.87□□□□□ -0.19
ZEB1-216ENST00000559496 PDCD7Q8N8D1 485 aaKnown RBP13.86□□□□□ -0.19
ZEB1-216ENST00000559496 ILDR1Q86SU0 546 aaPredicted RBP13.85□□□□□ -0.19
ZEB1-216ENST00000559496 CABP2Q9NPB3 220 aa13.84□□□□□ -0.19
ZEB1-216ENST00000559496 VGFO15240 615 aaPredicted RBP13.83□□□□□ -0.2
ZEB1-216ENST00000559496 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.8□□□□□ -0.21e-7■■■■■ 28.4
ZEB1-216ENST00000559496 TAOK2Q9UL54 1235 aa13.8□□□□□ -0.2
ZEB1-216ENST00000559496 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.77□□□□□ -0.21
ZEB1-216ENST00000559496 ZFP91Q96JP5 570 aaPredicted RBP13.77□□□□□ -0.21
ZEB1-216ENST00000559496 CCDC180Q9P1Z9 1646 aa13.74□□□□□ -0.21
ZEB1-216ENST00000559496 RGL2O15211 777 aa13.72□□□□□ -0.21
ZEB1-216ENST00000559496 EFCAB3Q8N7B9 438 aa13.72□□□□□ -0.21
ZEB1-216ENST00000559496 L3MBTL3Q96JM7 780 aaPredicted RBP13.71□□□□□ -0.22
ZEB1-216ENST00000559496 SLAIN1Q8ND83 568 aa13.7□□□□□ -0.22
ZEB1-216ENST00000559496 DPY19L2Q6NUT2 758 aa13.68□□□□□ -0.22
ZEB1-216ENST00000559496 LCE2DQ5TA82 110 aaPredicted RBP13.67□□□□□ -0.22
ZEB1-216ENST00000559496 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.66□□□□□ -0.22
ZEB1-216ENST00000559496 SOX12O15370 315 aa13.64□□□□□ -0.23
ZEB1-216ENST00000559496 BCL11BQ9C0K0 894 aaPredicted RBP13.64□□□□□ -0.23
ZEB1-216ENST00000559496 STK24Q9Y6E0 443 aa13.62□□□□□ -0.23
ZEB1-216ENST00000559496 STK25O00506 426 aa13.61□□□□□ -0.23
ZEB1-216ENST00000559496 C3orf67Q6ZVT6 689 aa13.6□□□□□ -0.23
ZEB1-216ENST00000559496 BOLA1Q9Y3E2 137 aa13.59□□□□□ -0.23
ZEB1-216ENST00000559496 FAM163AQ96GL9 167 aaPredicted RBP13.58□□□□□ -0.24
ZEB1-216ENST00000559496 MS4A4AQ96JQ5 239 aa13.58□□□□□ -0.24
ZEB1-216ENST00000559496 POTEMA6NI47 508 aa13.57□□□□□ -0.24
ZEB1-216ENST00000559496 TMEM121BQ9BXQ6 578 aaPredicted RBP13.57□□□□□ -0.24
ZEB1-216ENST00000559496 PHF8Q9UPP1 1060 aa13.57□□□□□ -0.24
ZEB1-216ENST00000559496 POTEGQ6S5H5 508 aa13.55□□□□□ -0.24
ZEB1-216ENST00000559496 G3V3G9 751 aa13.52□□□□□ -0.25
ZEB1-216ENST00000559496 FBXO22Q8NEZ5 403 aa13.52□□□□□ -0.25
ZEB1-216ENST00000559496 NLRP6P59044 892 aa13.5□□□□□ -0.25
ZEB1-216ENST00000559496 MFRPQ9BY79 579 aa13.49□□□□□ -0.25
ZEB1-216ENST00000559496 MICALL2Q8IY33 904 aa13.48□□□□□ -0.25
ZEB1-216ENST00000559496 SNPHO15079 494 aa13.47□□□□□ -0.25
ZEB1-216ENST00000559496 ST18O60284 1047 aa13.47□□□□□ -0.25
ZEB1-216ENST00000559496 HS6ST3Q8IZP7 471 aa13.45□□□□□ -0.26
ZEB1-216ENST00000559496 CHGAP10645 457 aaKnown RBP13.43□□□□□ -0.26
ZEB1-216ENST00000559496 TMEM92Q6UXU6 159 aa13.39□□□□□ -0.27
ZEB1-216ENST00000559496 PCDH10Q9P2E7 1040 aa13.36□□□□□ -0.27
ZEB1-216ENST00000559496 DNAJC5Q9H3Z4 198 aa13.34□□□□□ -0.27
ZEB1-216ENST00000559496 HOXB3P14651 431 aaPredicted RBP13.33□□□□□ -0.27
ZEB1-216ENST00000559496 AMER1Q5JTC6 1135 aaPredicted RBP13.33□□□□□ -0.27
ZEB1-216ENST00000559496 DCAF8L2P0C7V8 631 aa13.31□□□□□ -0.28
ZEB1-216ENST00000559496 PPP1R37O75864 691 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms