RNA–Protein interactions for RNA: ENST00000559437.5

PSMA4-213, Transcript of proteasome subunit alpha 4, humanhuman

TSL 5

Gene PSMA4, Length 756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-213ENST00000559437 TOPBP1Q92547 1522 aa14.23□□□□□ -0.13
PSMA4-213ENST00000559437 SPINK5Q9NQ38 1064 aaPredicted RBP14.2□□□□□ -0.14
PSMA4-213ENST00000559437 POLA2Q14181 598 aa14.18□□□□□ -0.14
PSMA4-213ENST00000559437 CUX1P39880 1505 aa14.15□□□□□ -0.14
PSMA4-213ENST00000559437 VASPP50552 380 aaPredicted RBP14.15□□□□□ -0.14
PSMA4-213ENST00000559437 IFT140Q96RY7 1462 aa14.14□□□□□ -0.15
PSMA4-213ENST00000559437 BIVM-ERCC5R4GMW8 1640 aa14.13□□□□□ -0.15
PSMA4-213ENST00000559437 POLA1P09884 1462 aaPredicted RBP14.12□□□□□ -0.15
PSMA4-213ENST00000559437 SYNJ1O43426 1573 aa14.12□□□□□ -0.15
PSMA4-213ENST00000559437 CAPN15O75808 1086 aa14.11□□□□□ -0.15
PSMA4-213ENST00000559437 WRNQ14191 1432 aaPredicted RBP eCLIP14.11□□□□□ -0.15
PSMA4-213ENST00000559437 TOP2BQ02880 1626 aa14.11□□□□□ -0.15
PSMA4-213ENST00000559437 FGD5Q6ZNL6 1462 aa14.1□□□□□ -0.15
PSMA4-213ENST00000559437 SOGA1O94964 1423 aa14.07□□□□□ -0.16
PSMA4-213ENST00000559437 TARBP1Q13395 1621 aaKnown RBP14.06□□□□□ -0.16
PSMA4-213ENST00000559437 RAD54L2Q9Y4B4 1467 aa14.04□□□□□ -0.16
PSMA4-213ENST00000559437 ZNF608Q9ULD9 1512 aaPredicted RBP14.04□□□□□ -0.16
PSMA4-213ENST00000559437 IFNLR1Q8IU57 520 aaPredicted RBP14.03□□□□□ -0.16
PSMA4-213ENST00000559437 WDR97A6NE52 1622 aa14.02□□□□□ -0.16
PSMA4-213ENST00000559437 EIF4G3O43432 1585 aaKnown RBP14□□□□□ -0.17
PSMA4-213ENST00000559437 AQRO60306 1485 aaKnown RBP eCLIP13.98□□□□□ -0.175e-7■■■■□ 26.1
PSMA4-213ENST00000559437 TDRD9Q8NDG6 1382 aaKnown RBP13.97□□□□□ -0.17
PSMA4-213ENST00000559437 ABCA10Q8WWZ4 1543 aa13.97□□□□□ -0.17
PSMA4-213ENST00000559437 ZBTB12Q9Y330 459 aaPredicted RBP13.97□□□□□ -0.17
PSMA4-213ENST00000559437 PLCB2Q00722 1185 aa13.95□□□□□ -0.18
PSMA4-213ENST00000559437 GAPVD1Q14C86 1478 aa13.92□□□□□ -0.18
PSMA4-213ENST00000559437 ABCB7O75027 752 aa13.91□□□□□ -0.18
PSMA4-213ENST00000559437 GRIN2BQ13224 1484 aa13.91□□□□□ -0.18
PSMA4-213ENST00000559437 ABCA5Q8WWZ7 1642 aa13.9□□□□□ -0.18
PSMA4-213ENST00000559437 DNAJC5Q9H3Z4 198 aa13.88□□□□□ -0.19
PSMA4-213ENST00000559437 PBRM1Q86U86 1689 aa13.87□□□□□ -0.19
PSMA4-213ENST00000559437 SNAPC4Q5SXM2 1469 aa13.87□□□□□ -0.19
PSMA4-213ENST00000559437 MAGI1Q96QZ7 1491 aaPredicted RBP13.87□□□□□ -0.19
PSMA4-213ENST00000559437 TRIM41Q8WV44 630 aa13.86□□□□□ -0.19
PSMA4-213ENST00000559437 PKD2Q13563 968 aa13.85□□□□□ -0.19
PSMA4-213ENST00000559437 OSCARQ8IYS5 282 aa13.85□□□□□ -0.19
PSMA4-213ENST00000559437 KIF27Q86VH2 1401 aa13.82□□□□□ -0.2
PSMA4-213ENST00000559437 ERICH3Q5RHP9 1530 aa13.81□□□□□ -0.2
PSMA4-213ENST00000559437 DSG3P32926 999 aa13.81□□□□□ -0.2
PSMA4-213ENST00000559437 CHMP7Q8WUX9 453 aaPredicted RBP13.81□□□□□ -0.2
PSMA4-213ENST00000559437 SYNJ2O15056 1496 aa13.8□□□□□ -0.2
PSMA4-213ENST00000559437 CHD1O14646 1710 aa13.79□□□□□ -0.2
PSMA4-213ENST00000559437 RUSC2Q8N2Y8 1516 aa13.77□□□□□ -0.21
PSMA4-213ENST00000559437 ADAMTS12P58397 1594 aa13.76□□□□□ -0.21
PSMA4-213ENST00000559437 FHAD1B1AJZ9 1412 aa13.76□□□□□ -0.21
PSMA4-213ENST00000559437 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
PSMA4-213ENST00000559437 KLHL34Q8N239 644 aa13.75□□□□□ -0.21
PSMA4-213ENST00000559437 ZNF692Q9BU19 519 aaPredicted RBP13.75□□□□□ -0.21
PSMA4-213ENST00000559437 SPOCK2Q92563 424 aa13.73□□□□□ -0.21
PSMA4-213ENST00000559437 STAG3Q9UJ98 1225 aa13.72□□□□□ -0.21
PSMA4-213ENST00000559437 GRIN2AQ12879 1464 aa13.72□□□□□ -0.21
PSMA4-213ENST00000559437 CUL7Q14999 1698 aa13.72□□□□□ -0.21
PSMA4-213ENST00000559437 IGF1RP08069 1367 aa13.71□□□□□ -0.21
PSMA4-213ENST00000559437 SPDYE2BA6NHP3 402 aa13.67□□□□□ -0.22
PSMA4-213ENST00000559437 SPDYE6P0CI01 402 aa13.67□□□□□ -0.22
PSMA4-213ENST00000559437 SPDYE2Q495Y8 402 aa13.67□□□□□ -0.22
PSMA4-213ENST00000559437 EEA1Q15075 1411 aa13.66□□□□□ -0.22
PSMA4-213ENST00000559437 CLASP1Q7Z460 1538 aa13.66□□□□□ -0.22
PSMA4-213ENST00000559437 CARMIL1Q5VZK9 1371 aa13.66□□□□□ -0.22
PSMA4-213ENST00000559437 NUP160Q12769 1436 aa13.65□□□□□ -0.22
PSMA4-213ENST00000559437 ECM2O94769 699 aaPredicted RBP13.64□□□□□ -0.23
PSMA4-213ENST00000559437 SSUH2Q9Y2M2 353 aa13.64□□□□□ -0.23
PSMA4-213ENST00000559437 CEP170Q5SW79 1584 aa13.63□□□□□ -0.23
PSMA4-213ENST00000559437 PLCD3Q8N3E9 789 aa13.62□□□□□ -0.23
PSMA4-213ENST00000559437 PRXQ9BXM0 1461 aa13.61□□□□□ -0.23
PSMA4-213ENST00000559437 ARHGEF11O15085 1522 aa13.6□□□□□ -0.23
PSMA4-213ENST00000559437 RAPGEF2Q9Y4G8 1499 aa13.59□□□□□ -0.23
PSMA4-213ENST00000559437 RIMBP3CA6NJZ7 1639 aa13.58□□□□□ -0.24
PSMA4-213ENST00000559437 RIMBP3BA6NNM3 1639 aa13.58□□□□□ -0.24
PSMA4-213ENST00000559437 RIMBP3Q9UFD9 1639 aa13.58□□□□□ -0.24
PSMA4-213ENST00000559437 VSIG10Q8N0Z9 540 aa13.57□□□□□ -0.24
PSMA4-213ENST00000559437 KIF21BO75037 1637 aa13.57□□□□□ -0.24
PSMA4-213ENST00000559437 FAM9AQ8IZU1 332 aaPredicted RBP13.56□□□□□ -0.24
PSMA4-213ENST00000559437 MIER1Q8N108 512 aa13.56□□□□□ -0.24
PSMA4-213ENST00000559437 BBXQ8WY36 941 aaPredicted RBP13.56□□□□□ -0.24
PSMA4-213ENST00000559437 KIAA0586Q9BVV6 1533 aa13.55□□□□□ -0.24
PSMA4-213ENST00000559437 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.55□□□□□ -0.24
PSMA4-213ENST00000559437 SHROOM2Q13796 1616 aa13.53□□□□□ -0.24
PSMA4-213ENST00000559437 CTTNBP2Q8WZ74 1663 aa13.53□□□□□ -0.24
PSMA4-213ENST00000559437 JPH4Q96JJ6 628 aa13.52□□□□□ -0.25
PSMA4-213ENST00000559437 NPM1P06748 294 aaKnown RBP eCLIP13.51□□□□□ -0.25
PSMA4-213ENST00000559437 ARAP1Q96P48 1450 aa13.49□□□□□ -0.25
PSMA4-213ENST00000559437 BCANQ96GW7 911 aa13.49□□□□□ -0.25
PSMA4-213ENST00000559437 IQGAP2Q13576 1575 aa13.49□□□□□ -0.25
PSMA4-213ENST00000559437 PRG4Q92954 1404 aaPredicted RBP13.48□□□□□ -0.25
PSMA4-213ENST00000559437 CYB5RLQ6IPT4 315 aa13.48□□□□□ -0.25
PSMA4-213ENST00000559437 RGL2O15211 777 aa13.47□□□□□ -0.25
PSMA4-213ENST00000559437 PAXIP1Q6ZW49 1069 aaPredicted RBP13.46□□□□□ -0.25
PSMA4-213ENST00000559437 ERCC6L2Q5T890 1561 aa13.45□□□□□ -0.26
PSMA4-213ENST00000559437 GOLGA3Q08378 1498 aa13.45□□□□□ -0.26
PSMA4-213ENST00000559437 PLEKHG5O94827 1062 aa13.43□□□□□ -0.26
PSMA4-213ENST00000559437 CARMIL2Q6F5E8 1435 aa13.43□□□□□ -0.26
PSMA4-213ENST00000559437 CFAP44Q96MT7 982 aa13.43□□□□□ -0.26
PSMA4-213ENST00000559437 UGGT2Q9NYU1 1516 aa13.41□□□□□ -0.26
PSMA4-213ENST00000559437 ZBTB47Q9UFB7 747 aaPredicted RBP13.41□□□□□ -0.26
PSMA4-213ENST00000559437 CIZ1Q9ULV3 898 aaPredicted RBP13.4□□□□□ -0.26
PSMA4-213ENST00000559437 KDM2AQ9Y2K7 1162 aa13.37□□□□□ -0.27
PSMA4-213ENST00000559437 TNIKQ9UKE5 1360 aa13.36□□□□□ -0.27
PSMA4-213ENST00000559437 DISP1Q96F81 1524 aa13.36□□□□□ -0.27
PSMA4-213ENST00000559437 UBTFP17480 764 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 234.5 ms