RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 MS4A3Q96HJ5 214 aa9.56□□□□□ -0.88
FOXN3-216ENST00000557496 ZBTB47Q9UFB7 747 aaPredicted RBP9.56□□□□□ -0.88
FOXN3-216ENST00000557496 FBXO3Q9UK99 471 aa9.56□□□□□ -0.88
FOXN3-216ENST00000557496 NUBP1P53384 320 aa9.52□□□□□ -0.89
FOXN3-216ENST00000557496 KIF12Q96FN5 646 aa9.52□□□□□ -0.89
FOXN3-216ENST00000557496 ASTLQ6HA08 431 aaPredicted RBP9.48□□□□□ -0.89
FOXN3-216ENST00000557496 MAP3K13O43283 966 aa9.46□□□□□ -0.9
FOXN3-216ENST00000557496 ATMINO43313 823 aaPredicted RBP9.46□□□□□ -0.9
FOXN3-216ENST00000557496 PELP1Q8IZL8 1130 aaKnown RBP9.46□□□□□ -0.9
FOXN3-216ENST00000557496 VASPP50552 380 aaPredicted RBP9.45□□□□□ -0.9
FOXN3-216ENST00000557496 FAM212AQ96EL1 285 aa9.44□□□□□ -0.9
FOXN3-216ENST00000557496 TRPC6Q9Y210 931 aa9.42□□□□□ -0.9
FOXN3-216ENST00000557496 SGIP1Q9BQI5 828 aa9.4□□□□□ -0.9
FOXN3-216ENST00000557496 ATN1P54259 1190 aaPredicted RBP9.39□□□□□ -0.91
FOXN3-216ENST00000557496 BMP2KQ9NSY1 1161 aaPredicted RBP9.39□□□□□ -0.91
FOXN3-216ENST00000557496 METRNQ9UJH8 293 aa9.39□□□□□ -0.91
FOXN3-216ENST00000557496 POTEB2H3BUK9 544 aa9.38□□□□□ -0.91
FOXN3-216ENST00000557496 TIE1P35590 1138 aa9.38□□□□□ -0.91
FOXN3-216ENST00000557496 SLC39A7Q92504 469 aa9.38□□□□□ -0.91
FOXN3-216ENST00000557496 PCDHB13Q9Y5F0 798 aa9.38□□□□□ -0.91
FOXN3-216ENST00000557496 C7P10643 843 aa9.36□□□□□ -0.91
FOXN3-216ENST00000557496 DCAF8Q5TAQ9 597 aa9.34□□□□□ -0.91
FOXN3-216ENST00000557496 IFNL1Q8IU54 200 aa9.34□□□□□ -0.91
FOXN3-216ENST00000557496 KLHL34Q8N239 644 aa9.34□□□□□ -0.91
FOXN3-216ENST00000557496 TTLL13PA6NNM8 815 aa9.33□□□□□ -0.92
FOXN3-216ENST00000557496 OTUD5Q96G74 571 aa9.32□□□□□ -0.92
FOXN3-216ENST00000557496 PYGBP11216 843 aa9.31□□□□□ -0.92
FOXN3-216ENST00000557496 IFNLR1Q8IU57 520 aaPredicted RBP9.3□□□□□ -0.92
FOXN3-216ENST00000557496 GSE1Q14687 1217 aa9.28□□□□□ -0.92
FOXN3-216ENST00000557496 POTEFA5A3E0 1075 aa9.27□□□□□ -0.93
FOXN3-216ENST00000557496 POTEJP0CG39 1038 aa9.27□□□□□ -0.93
FOXN3-216ENST00000557496 TRIM35Q9UPQ4 493 aa9.27□□□□□ -0.93
FOXN3-216ENST00000557496 TMEM106CQ9BVX2 250 aa9.25□□□□□ -0.93
FOXN3-216ENST00000557496 SPOCK2Q92563 424 aa9.24□□□□□ -0.93
FOXN3-216ENST00000557496 IER5LQ5T953 404 aa9.23□□□□□ -0.93
FOXN3-216ENST00000557496 PCDHB8Q9UN66 801 aa9.22□□□□□ -0.93
FOXN3-216ENST00000557496 COLQQ9Y215 455 aaPredicted RBP9.22□□□□□ -0.93
FOXN3-216ENST00000557496 CHRM1P11229 460 aaPredicted RBP9.21□□□□□ -0.94
FOXN3-216ENST00000557496 SEC24BO95487 1268 aa9.19□□□□□ -0.94
FOXN3-216ENST00000557496 MAMSTRQ6ZN01 415 aa9.19□□□□□ -0.94
FOXN3-216ENST00000557496 ZNF467Q7Z7K2 595 aaPredicted RBP9.18□□□□□ -0.94
FOXN3-216ENST00000557496 SCUBE2Q9NQ36 999 aa9.15□□□□□ -0.94
FOXN3-216ENST00000557496 CIZ1Q9ULV3 898 aaPredicted RBP9.15□□□□□ -0.94
FOXN3-216ENST00000557496 IRX5P78411 483 aaPredicted RBP9.14□□□□□ -0.95
FOXN3-216ENST00000557496 PLCG2P16885 1265 aa9.11□□□□□ -0.95
FOXN3-216ENST00000557496 PSEN1P49768 467 aa9.09□□□□□ -0.95
FOXN3-216ENST00000557496 OCEL1Q9H607 264 aa9.08□□□□□ -0.96
FOXN3-216ENST00000557496 PDAP1Q13442 181 aaKnown RBP9.07□□□□□ -0.96
FOXN3-216ENST00000557496 TRIM41Q8WV44 630 aa9.06□□□□□ -0.96
FOXN3-216ENST00000557496 GOLGA2Q08379 1002 aa9.04□□□□□ -0.96
FOXN3-216ENST00000557496 MKRN3Q13064 507 aaKnown RBP9.03□□□□□ -0.96
FOXN3-216ENST00000557496 PDCD7Q8N8D1 485 aaKnown RBP9.03□□□□□ -0.96
FOXN3-216ENST00000557496 LCE2DQ5TA82 110 aaPredicted RBP9.02□□□□□ -0.97
FOXN3-216ENST00000557496 POTEMA6NI47 508 aa9□□□□□ -0.97
FOXN3-216ENST00000557496 ILDR1Q86SU0 546 aaPredicted RBP9□□□□□ -0.97
FOXN3-216ENST00000557496 SLAIN1Q8ND83 568 aa8.99□□□□□ -0.97
FOXN3-216ENST00000557496 POTEGQ6S5H5 508 aa8.98□□□□□ -0.97
FOXN3-216ENST00000557496 CABP2Q9NPB3 220 aa8.98□□□□□ -0.97
FOXN3-216ENST00000557496 RNF25Q96BH1 459 aaPredicted RBP8.97□□□□□ -0.97
FOXN3-216ENST00000557496 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.97□□□□□ -0.97
FOXN3-216ENST00000557496 FAM163AQ96GL9 167 aaPredicted RBP8.96□□□□□ -0.98
FOXN3-216ENST00000557496 RIOK3O14730 519 aaKnown RBP8.94□□□□□ -0.98
FOXN3-216ENST00000557496 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.93□□□□□ -0.98
FOXN3-216ENST00000557496 L3MBTL3Q96JM7 780 aaPredicted RBP8.92□□□□□ -0.98
FOXN3-216ENST00000557496 DPY19L2Q6NUT2 758 aa8.9□□□□□ -0.98
FOXN3-216ENST00000557496 C3orf67Q6ZVT6 689 aa8.9□□□□□ -0.98
FOXN3-216ENST00000557496 VGFO15240 615 aaPredicted RBP8.89□□□□□ -0.99
FOXN3-216ENST00000557496 EFCAB3Q8N7B9 438 aa8.89□□□□□ -0.99
FOXN3-216ENST00000557496 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.88□□□□□ -0.99
FOXN3-216ENST00000557496 ZFP91Q96JP5 570 aaPredicted RBP8.88□□□□□ -0.99
FOXN3-216ENST00000557496 ST18O60284 1047 aa8.86□□□□□ -0.99
FOXN3-216ENST00000557496 PCDH10Q9P2E7 1040 aa8.85□□□□□ -0.99
FOXN3-216ENST00000557496 BOLA1Q9Y3E2 137 aa8.85□□□□□ -0.99
FOXN3-216ENST00000557496 SNPHO15079 494 aa8.82□□□□□ -1
FOXN3-216ENST00000557496 PKD2Q13563 968 aa8.82□□□□□ -1
FOXN3-216ENST00000557496 PLSCR2Q9NRY7 297 aa8.82□□□□□ -1
FOXN3-216ENST00000557496 G3V3G9 751 aa8.81□□□□□ -1
FOXN3-216ENST00000557496 SOX12O15370 315 aa8.81□□□□□ -1
FOXN3-216ENST00000557496 ECM2O94769 699 aaPredicted RBP8.81□□□□□ -1
FOXN3-216ENST00000557496 TMEM121BQ9BXQ6 578 aaPredicted RBP8.81□□□□□ -1
FOXN3-216ENST00000557496 TAOK2Q9UL54 1235 aa8.8□□□□□ -1
FOXN3-216ENST00000557496 MS4A4AQ96JQ5 239 aa8.79□□□□□ -1
FOXN3-216ENST00000557496 BCL11BQ9C0K0 894 aaPredicted RBP8.79□□□□□ -1
FOXN3-216ENST00000557496 PHF8Q9UPP1 1060 aa8.78□□□□□ -1
FOXN3-216ENST00000557496 RGL2O15211 777 aa8.76□□□□□ -1.01
FOXN3-216ENST00000557496 MICALL2Q8IY33 904 aa8.75□□□□□ -1.01
FOXN3-216ENST00000557496 STK24Q9Y6E0 443 aa8.75□□□□□ -1.01
FOXN3-216ENST00000557496 STK25O00506 426 aa8.74□□□□□ -1.01
FOXN3-216ENST00000557496 CDAN1Q8IWY9 1227 aa8.74□□□□□ -1.01
FOXN3-216ENST00000557496 FBXO22Q8NEZ5 403 aa8.73□□□□□ -1.01
FOXN3-216ENST00000557496 NLRP6P59044 892 aa8.72□□□□□ -1.01
FOXN3-216ENST00000557496 MARVELD3Q96A59 401 aa8.72□□□□□ -1.01
FOXN3-216ENST00000557496 HOXB3P14651 431 aaPredicted RBP8.71□□□□□ -1.02
FOXN3-216ENST00000557496 MFRPQ9BY79 579 aa8.71□□□□□ -1.02
FOXN3-216ENST00000557496 TMEM92Q6UXU6 159 aa8.7□□□□□ -1.02
FOXN3-216ENST00000557496 EMP3P54852 163 aa8.67□□□□□ -1.02
FOXN3-216ENST00000557496 DOK7Q18PE1 504 aa8.65□□□□□ -1.02
FOXN3-216ENST00000557496 HOXB1P14653 301 aaPredicted RBP8.62□□□□□ -1.03
FOXN3-216ENST00000557496 ZNF710Q8N1W2 664 aa8.62□□□□□ -1.03
FOXN3-216ENST00000557496 HS3ST6Q96QI5 342 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms