RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 CFAP53Q96M91 514 aa11.13□□□□□ -0.63
CHD8-213ENST00000557364 CDK11BP21127 795 aaKnown RBP11.12□□□□□ -0.63
CHD8-213ENST00000557364 KANK1Q14678 1352 aa11.12□□□□□ -0.63
CHD8-213ENST00000557364 DCAF1Q9Y4B6 1507 aa11.12□□□□□ -0.63
CHD8-213ENST00000557364 KCNH8Q96L42 1107 aa11.12□□□□□ -0.63
CHD8-213ENST00000557364 WRNQ14191 1432 aaPredicted RBP eCLIP11.11□□□□□ -0.63
CHD8-213ENST00000557364 A0A0G2JS52 829 aa11.1□□□□□ -0.63
CHD8-213ENST00000557364 CFDP1Q9UEE9 299 aaPredicted RBP11.1□□□□□ -0.63
CHD8-213ENST00000557364 FHAD1B1AJZ9 1412 aa11.1□□□□□ -0.63
CHD8-213ENST00000557364 CHIC2Q9UKJ5 165 aa11.09□□□□□ -0.63
CHD8-213ENST00000557364 SMARCA2P51531 1590 aa11.09□□□□□ -0.63
CHD8-213ENST00000557364 CEP164Q9UPV0 1460 aa11.08□□□□□ -0.64
CHD8-213ENST00000557364 PDS5BQ9NTI5 1447 aa11.08□□□□□ -0.64
CHD8-213ENST00000557364 PNNQ9H307 717 aaKnown RBP11.07□□□□□ -0.64
CHD8-213ENST00000557364 CHMP4BQ9H444 224 aaKnown RBP11.07□□□□□ -0.64
CHD8-213ENST00000557364 EIF4G2P78344 907 aaKnown RBP eCLIP11.06□□□□□ -0.64
CHD8-213ENST00000557364 CARMIL2Q6F5E8 1435 aa11.05□□□□□ -0.64
CHD8-213ENST00000557364 KDM2AQ9Y2K7 1162 aa11.04□□□□□ -0.64
CHD8-213ENST00000557364 TRHP20396 242 aaPredicted RBP11.02□□□□□ -0.64
CHD8-213ENST00000557364 NUDCQ9Y266 331 aa11.02□□□□□ -0.65
CHD8-213ENST00000557364 KNSTRNQ9Y448 316 aa11.01□□□□□ -0.65
CHD8-213ENST00000557364 HNRNPUQ00839 825 aaKnown RBP eCLIP11.01□□□□□ -0.65
CHD8-213ENST00000557364 POGKQ9P215 609 aa11□□□□□ -0.65
CHD8-213ENST00000557364 CCNB3Q8WWL7 1395 aa11□□□□□ -0.65
CHD8-213ENST00000557364 ZBTB7CA1YPR0 619 aa11□□□□□ -0.65
CHD8-213ENST00000557364 CASC1Q6TDU7 716 aa10.99□□□□□ -0.65
CHD8-213ENST00000557364 NPHP1O15259 732 aa10.98□□□□□ -0.65
CHD8-213ENST00000557364 CHMP4AQ9BY43 222 aa10.97□□□□□ -0.65
CHD8-213ENST00000557364 MS4A1P11836 297 aa10.97□□□□□ -0.65
CHD8-213ENST00000557364 FAM9BQ8IZU0 186 aa10.97□□□□□ -0.65
CHD8-213ENST00000557364 MRS2Q9HD23 443 aa10.96□□□□□ -0.65
CHD8-213ENST00000557364 ANP32EQ9BTT0 268 aa10.96□□□□□ -0.65
CHD8-213ENST00000557364 MAPK8IP3Q9UPT6 1336 aa10.96□□□□□ -0.66
CHD8-213ENST00000557364 CCDC136Q96JN2 1154 aa10.95□□□□□ -0.66
CHD8-213ENST00000557364 RRP7BPQ9NSQ0 103 aa10.95□□□□□ -0.66
CHD8-213ENST00000557364 EIF4G1Q04637 1599 aaKnown RBP10.94□□□□□ -0.66
CHD8-213ENST00000557364 CEP162Q5TB80 1403 aa10.94□□□□□ -0.66
CHD8-213ENST00000557364 NCLP19338 710 aaKnown RBP10.94□□□□□ -0.66
CHD8-213ENST00000557364 DDX10Q13206 875 aaKnown RBP10.93□□□□□ -0.66
CHD8-213ENST00000557364 TNIKQ9UKE5 1360 aa10.92□□□□□ -0.66
CHD8-213ENST00000557364 BECN1Q14457 450 aa10.92□□□□□ -0.66
CHD8-213ENST00000557364 GTF3C3Q9Y5Q9 886 aa10.91□□□□□ -0.66
CHD8-213ENST00000557364 ZRSR1Q15695 479 aaKnown RBP10.9□□□□□ -0.66
CHD8-213ENST00000557364 GOLGA6L22H0YM25 854 aa10.9□□□□□ -0.66
CHD8-213ENST00000557364 LMOD2Q6P5Q4 547 aa10.9□□□□□ -0.67
CHD8-213ENST00000557364 CARMIL1Q5VZK9 1371 aa10.9□□□□□ -0.67
CHD8-213ENST00000557364 CUX2O14529 1486 aa10.89□□□□□ -0.67
CHD8-213ENST00000557364 CFAP44Q96MT7 982 aa10.89□□□□□ -0.67
CHD8-213ENST00000557364 MYO15BQ96JP2 1530 aa10.89□□□□□ -0.67
CHD8-213ENST00000557364 ARXQ96QS3 562 aa10.89□□□□□ -0.67
CHD8-213ENST00000557364 CARD11Q9BXL7 1154 aa10.89□□□□□ -0.67
CHD8-213ENST00000557364 GOLGA2Q08379 1002 aa10.88□□□□□ -0.67
CHD8-213ENST00000557364 ABCC8Q09428 1581 aa10.88□□□□□ -0.67
CHD8-213ENST00000557364 FTSJ3Q8IY81 847 aaKnown RBP10.88□□□□□ -0.67
CHD8-213ENST00000557364 RGL3Q3MIN7 710 aa10.88□□□□□ -0.67
CHD8-213ENST00000557364 FMN1Q68DA7 1419 aa10.87□□□□□ -0.67
CHD8-213ENST00000557364 RSPH4AQ5TD94 716 aa10.87□□□□□ -0.67
CHD8-213ENST00000557364 DDRGK1Q96HY6 314 aa10.87□□□□□ -0.67
CHD8-213ENST00000557364 TMX4Q9H1E5 349 aaPredicted RBP10.86□□□□□ -0.67
CHD8-213ENST00000557364 EFCAB2Q5VUJ9 269 aa10.85□□□□□ -0.67
CHD8-213ENST00000557364 TMF1P82094 1093 aa10.85□□□□□ -0.67
CHD8-213ENST00000557364 TIMELESSQ9UNS1 1208 aa10.85□□□□□ -0.67
CHD8-213ENST00000557364 PPM1GO15355 546 aaPredicted RBP10.85□□□□□ -0.67
CHD8-213ENST00000557364 SALL2Q9Y467 1007 aaPredicted RBP10.84□□□□□ -0.67
CHD8-213ENST00000557364 CALD1Q05682 793 aaKnown RBP10.84□□□□□ -0.67
CHD8-213ENST00000557364 EID1Q9Y6B2 187 aa10.83□□□□□ -0.68
CHD8-213ENST00000557364 EIF3AQ14152 1382 aaKnown RBP10.83□□□□□ -0.68
CHD8-213ENST00000557364 FKBP8Q14318 412 aa10.83□□□□□ -0.68
CHD8-213ENST00000557364 ARHGAP35Q9NRY4 1499 aa10.83□□□□□ -0.68
CHD8-213ENST00000557364 HDAC5Q9UQL6 1122 aa10.82□□□□□ -0.68
CHD8-213ENST00000557364 PLEKHG5O94827 1062 aa10.82□□□□□ -0.68
CHD8-213ENST00000557364 HDGFL2Q7Z4V5 671 aaPredicted RBP10.81□□□□□ -0.68
CHD8-213ENST00000557364 SOGA1O94964 1423 aa10.81□□□□□ -0.68
CHD8-213ENST00000557364 OS9Q13438 667 aaPredicted RBP10.79□□□□□ -0.68
CHD8-213ENST00000557364 CECR2Q9BXF3 1484 aa10.79□□□□□ -0.68
CHD8-213ENST00000557364 RTF1Q92541 710 aaKnown RBP10.79□□□□□ -0.68
CHD8-213ENST00000557364 SRPK2P78362 688 aaKnown RBP10.78□□□□□ -0.68
CHD8-213ENST00000557364 CCDC18Q5T9S5 1454 aa10.77□□□□□ -0.68
CHD8-213ENST00000557364 ANKRD30AQ9BXX3 1397 aa10.77□□□□□ -0.68
CHD8-213ENST00000557364 MLECQ14165 292 aa10.76□□□□□ -0.69
CHD8-213ENST00000557364 GOLGA6L6A8MZA4 724 aa10.76□□□□□ -0.69
CHD8-213ENST00000557364 NRDCO43847 1150 aa10.75□□□□□ -0.69
CHD8-213ENST00000557364 FGD1P98174 961 aa10.75□□□□□ -0.69
CHD8-213ENST00000557364 TOP2AP11388 1531 aaKnown RBP10.74□□□□□ -0.69
CHD8-213ENST00000557364 GLIPR1L2Q4G1C9 344 aa10.74□□□□□ -0.69
CHD8-213ENST00000557364 UACAQ9BZF9 1416 aa10.74□□□□□ -0.69
CHD8-213ENST00000557364 GGT6Q6P531 493 aa10.73□□□□□ -0.69
CHD8-213ENST00000557364 LAS1LQ9Y4W2 734 aaKnown RBP10.73□□□□□ -0.69
CHD8-213ENST00000557364 MCCP23508 829 aa10.73□□□□□ -0.69
CHD8-213ENST00000557364 CADPSQ9ULU8 1353 aa10.72□□□□□ -0.69
CHD8-213ENST00000557364 U2SURPO15042 1029 aaKnown RBP10.72□□□□□ -0.69
CHD8-213ENST00000557364 KCNJ4P48050 445 aa10.72□□□□□ -0.69
CHD8-213ENST00000557364 IPO8O15397 1037 aaKnown RBP10.72□□□□□ -0.69
CHD8-213ENST00000557364 MORC1Q86VD1 984 aa10.71□□□□□ -0.69
CHD8-213ENST00000557364 DCAF11Q8TEB1 546 aa10.71□□□□□ -0.69
CHD8-213ENST00000557364 SPAG9O60271 1321 aaKnown RBP10.71□□□□□ -0.7
CHD8-213ENST00000557364 TERF2IPQ9NYB0 399 aa10.71□□□□□ -0.7
CHD8-213ENST00000557364 CSB-PGBD3P0DP91 1061 aa10.7□□□□□ -0.7
CHD8-213ENST00000557364 L1TD1Q5T7N2 865 aaKnown RBP10.7□□□□□ -0.7
CHD8-213ENST00000557364 SENP3Q9H4L4 574 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms